Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318233

Identifier: 158318233

GI number: 158318233

Start: 7900334

End: 7900888

Strand: Direct

Name: 158318233

Synonym: Franean1_6498

Alternate gene names: NA

Gene position: 7900334-7900888 (Clockwise)

Preceding gene: 158318232

Following gene: 158318234

Centisome position: 87.96

GC content: 65.23

Gene sequence:

>555_bases
ATGATCGCTCCTGCCTGGATGCATCAGCAGATCACGGCGGAGCAGTACGACTCCTGGTCCGAGGAGCAGTGCGCGGGCAT
CGAGATCGTGGACGGAATGATCGTCGTGAGTCCCAGCGCGTCCAAGCGTCACAACCGGCTGATCAAGATCCTCGCGGTCG
CCCTGGAGTCGGCGGCCGGGCCGGACTGGAACGCGGACTTCGACTTCGACGTCCGGCTTCAGGATGTGCCGCTGACGAAT
CGGCGTCCGGACGTGGTCGTGTACCGTGCCGACACGATCGACATCATGCCGGCTCGTCCCGAGCACATCCTGCTCGTTGC
CGAGGTCGTCTCGCCCGGTTCGGAGACGACGGATCGGATCGTCAAGGCCGAGCAGTACGCGAGAGCTGGAATCTCGTACT
ACTGGCGAGTCGAGCAGCCCCCCGCCGGCGTCCCGGTCGTCCATACCTGCGTCCTTGACCCGGCGACCGGGACGTACCGC
GATGGCGAGGTCTTCACGGGCGTCGTCGACGCCGTTGCCCCCTTCCCGGTCAAGGTTGATCTCACTCAGCTGTAG

Upstream 100 bases:

>100_bases
CTCGTTCGGTGAGCAGTTCCTCGGCCTGACGGCGCTAGGCTGATGTGGCGGGATCAGGCCTGCCGGGTCTCCTGAGGGGA
GGTGCGCCATCACCGCGGAG

Downstream 100 bases:

>100_bases
CGTTCGAACATATGTTCCGGTCGGACCCACAGCCAATACACAGGCGGGGCACAAGGCCGGGAAAGGTCGACGCCCGACCC
TGATTCTTATGCCGACCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIAPAWMHQQITAEQYDSWSEEQCAGIEIVDGMIVVSPSASKRHNRLIKILAVALESAAGPDWNADFDFDVRLQDVPLTN
RRPDVVVYRADTIDIMPARPEHILLVAEVVSPGSETTDRIVKAEQYARAGISYYWRVEQPPAGVPVVHTCVLDPATGTYR
DGEVFTGVVDAVAPFPVKVDLTQL

Sequences:

>Translated_184_residues
MIAPAWMHQQITAEQYDSWSEEQCAGIEIVDGMIVVSPSASKRHNRLIKILAVALESAAGPDWNADFDFDVRLQDVPLTN
RRPDVVVYRADTIDIMPARPEHILLVAEVVSPGSETTDRIVKAEQYARAGISYYWRVEQPPAGVPVVHTCVLDPATGTYR
DGEVFTGVVDAVAPFPVKVDLTQL
>Mature_184_residues
MIAPAWMHQQITAEQYDSWSEEQCAGIEIVDGMIVVSPSASKRHNRLIKILAVALESAAGPDWNADFDFDVRLQDVPLTN
RRPDVVVYRADTIDIMPARPEHILLVAEVVSPGSETTDRIVKAEQYARAGISYYWRVEQPPAGVPVVHTCVLDPATGTYR
DGEVFTGVVDAVAPFPVKVDLTQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20313; Mature: 20313

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPAWMHQQITAEQYDSWSEEQCAGIEIVDGMIVVSPSASKRHNRLIKILAVALESAAG
CCCCHHHHHHHCHHHHCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDWNADFDFDVRLQDVPLTNRRPDVVVYRADTIDIMPARPEHILLVAEVVSPGSETTDRI
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCEEEEEEEECCCCCCHHHHH
VKAEQYARAGISYYWRVEQPPAGVPVVHTCVLDPATGTYRDGEVFTGVVDAVAPFPVKVD
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEE
LTQL
EECC
>Mature Secondary Structure
MIAPAWMHQQITAEQYDSWSEEQCAGIEIVDGMIVVSPSASKRHNRLIKILAVALESAAG
CCCCHHHHHHHCHHHHCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDWNADFDFDVRLQDVPLTNRRPDVVVYRADTIDIMPARPEHILLVAEVVSPGSETTDRI
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEECCCCCCEEEEEEEECCCCCCHHHHH
VKAEQYARAGISYYWRVEQPPAGVPVVHTCVLDPATGTYRDGEVFTGVVDAVAPFPVKVD
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEE
LTQL
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA