| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is prs [C]
Identifier: 158318220
GI number: 158318220
Start: 7883699
End: 7884328
Strand: Direct
Name: prs [C]
Synonym: Franean1_6485
Alternate gene names: 158318220
Gene position: 7883699-7884328 (Clockwise)
Preceding gene: 158318219
Following gene: 158318222
Centisome position: 87.77
GC content: 77.78
Gene sequence:
>630_bases GTGTACCTGTTCGCCGACCGGCGCGAGGCCGGCGCGCTGCTGGCGGACCGGCTCGCCGGCTCCGCCGCGGGCGTGCTCGT CCTGGGCCTGCCCCGGGGCGGCGTGCCGGTCGCCGCCGAGGTCGCGAGCCGGCTCGGCGCCGAACTGGACGCGCTGACCG TGCGCAAGCTCGGTGCGCCCGGCCAGCCCGAGTACGCCATCGGGGCGATCGCGACCGGCGGGATCCGCATCGTGAACGAG CCCGCGATGCTCCGGCTCGGGCTGGCCCCCGGCGTCGTCGACGCCATCGCGGACAGTGAGGAGCACGAGCTCGCGCGCCG CGAGCACGCGTACCGCGGTGACCGGCCGCCGCCCGCGGTCGCCGGCCGCGAGGTGATCGTCGTCGACGACGGCCTCGCGA CCGGCGCGACCATGGTCGCGGCCGTGCGGGCGATGCGCTCGGCCGGCGCGGCGCGGGTGACCGCCGCCGTACCGGTCGCC TCGGGTCAGGGGGCGCAGACCCTGCGGCCAGAGGTCGACGCCCTCGTCTGCCTGGCCGTCCCCGACGGCTTCATGGCCGT CGGCCCGTACTACCGCGACTTCGGCGCCACCACGGACGACGAGGTCCGCGGACTCCTCTCCCCCGCGTGA
Upstream 100 bases:
>100_bases CACCCGAGCCGCGACCACCGAGCGGGCCGCGCCACGGAGGACCGGACGACGGATCGCACCACCCGGGTCATGGCGGGCAC GGCGGGGTAGGCCCACCCAG
Downstream 100 bases:
>100_bases CGCCTCCGGATCGCGGCGGTGGTCGCGGTACTAACCCGCGACGCCCGCGGCGCGGCGACGGCCGGCCCGCGTCCGCCGCG GGTCCGGGCTGCCCGCGTCG
Product: phosphoribosyltransferase
Products: AMP; H+; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MYLFADRREAGALLADRLAGSAAGVLVLGLPRGGVPVAAEVASRLGAELDALTVRKLGAPGQPEYAIGAIATGGIRIVNE PAMLRLGLAPGVVDAIADSEEHELARREHAYRGDRPPPAVAGREVIVVDDGLATGATMVAAVRAMRSAGAARVTAAVPVA SGQGAQTLRPEVDALVCLAVPDGFMAVGPYYRDFGATTDDEVRGLLSPA
Sequences:
>Translated_209_residues MYLFADRREAGALLADRLAGSAAGVLVLGLPRGGVPVAAEVASRLGAELDALTVRKLGAPGQPEYAIGAIATGGIRIVNE PAMLRLGLAPGVVDAIADSEEHELARREHAYRGDRPPPAVAGREVIVVDDGLATGATMVAAVRAMRSAGAARVTAAVPVA SGQGAQTLRPEVDALVCLAVPDGFMAVGPYYRDFGATTDDEVRGLLSPA >Mature_209_residues MYLFADRREAGALLADRLAGSAAGVLVLGLPRGGVPVAAEVASRLGAELDALTVRKLGAPGQPEYAIGAIATGGIRIVNE PAMLRLGLAPGVVDAIADSEEHELARREHAYRGDRPPPAVAGREVIVVDDGLATGATMVAAVRAMRSAGAARVTAAVPVA SGQGAQTLRPEVDALVCLAVPDGFMAVGPYYRDFGATTDDEVRGLLSPA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: 2.7.6.1 [C]
Molecular weight: Translated: 21316; Mature: 21316
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLFADRREAGALLADRLAGSAAGVLVLGLPRGGVPVAAEVASRLGAELDALTVRKLGAP CEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCC GQPEYAIGAIATGGIRIVNEPAMLRLGLAPGVVDAIADSEEHELARREHAYRGDRPPPAV CCCCEEEEEEECCCEEEECCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCC AGREVIVVDDGLATGATMVAAVRAMRSAGAARVTAAVPVASGQGAQTLRPEVDALVCLAV CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEC PDGFMAVGPYYRDFGATTDDEVRGLLSPA CCCCEECCCHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure MYLFADRREAGALLADRLAGSAAGVLVLGLPRGGVPVAAEVASRLGAELDALTVRKLGAP CEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCC GQPEYAIGAIATGGIRIVNEPAMLRLGLAPGVVDAIADSEEHELARREHAYRGDRPPPAV CCCCEEEEEEECCCEEEECCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCC AGREVIVVDDGLATGATMVAAVRAMRSAGAARVTAAVPVASGQGAQTLRPEVDALVCLAV CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEC PDGFMAVGPYYRDFGATTDDEVRGLLSPA CCCCEECCCHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; alpha-D-Ribose 5-phosphate [C]
Specific reaction: ATP + alpha-D-Ribose 5-phosphate <==> AMP + H+ + 5-Phospho-alpha-D-ribose 1-diphosphate [C]
General reaction: Diphosphate transfer [C]
Inhibitor: ADP [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]