| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318216
Identifier: 158318216
GI number: 158318216
Start: 7878864
End: 7879763
Strand: Reverse
Name: 158318216
Synonym: Franean1_6481
Alternate gene names: NA
Gene position: 7879763-7878864 (Counterclockwise)
Preceding gene: 158318221
Following gene: 158318215
Centisome position: 87.73
GC content: 73.22
Gene sequence:
>900_bases ATGGCCATGGATGATGCGCCCCGCGGTCTGCGGGAAAGTCTCAAACGTGTCGCCGTGACGCTGAAAGAGGCGGAGATCCC CTTCGCGCTCGGCGGCAGCTACGCGTGCTGGGCCCGCGGCGGGCCGGAGCCCGTGCACGACGTGGACTTCATGCTCCGCG AGGCGGACGTCCCGCGTGCCGTGGAGGTTCTCTGCGCCGGTGGGCTGCGCCCGGTGGACCCGCCCGAGGACTGGCTGACC AAGGTCTTCGACGGCGACGTCCTGGTCGACCTGATCCATCACCCGGTCGGGCGGGCGGTCACCGACGAGATGCTGGCCCG CTCGAGCGAGATGTCCGTCGACTCGGTCCGGATGCCCGTCCTCGACGCCACCGACTGGTTCGAGATGACCCTGCTCGCCC TCGACGAGCGGTACTGCGACCTCGGCCGCGTGATCCCCATGATCCGCGCGATGCGCGAGCAGGTCGACTGGGAGCAGGTC CGCCGGGCCACCGCCGAGTCGCCGTTCGCCGAGGCCGTGCTGCTGGTCGCCACCCGGCTGAAGCTGATCCCGCCGCACGT CGTCACCCCGCCGCGCGCCGCACGCGCCGTGGATGCCGTGGACGGGGTGGGTGCCGCGGGCGCCGCCGAGCCGGTCGCCG TCCTGGACGTCACCGAGCCGGCGGAGTACCTGGCCGGTGACCTGCACGAGCGCCTGGCGGAGGATCCGCGGGTCGCCGAG CTCGGCCTGGACGTCGCCGTCGGCCCGGAGGGGATCACCGTGCGCGGGGAGGTGGCCACCGAGGCCCGCCGCCGCGCGGT CGACGCGGTGCTGGCCGACGCCGTGCCCGGCCGGCCCGTCCGCAACGACGTCATCGTGTCGAAGCGCGACTCACCGTCGA CGATGGAGAGTGTGTCGTGA
Upstream 100 bases:
>100_bases TCCGAATTGGCGGTGATGCGCCCGCGCGCCGCCCGATGCGGGGGGTCCCGGCACCGGATGCGGCCTTCGGGGAGTCAGGA CGATCGGCGCGGGTACCCCG
Downstream 100 bases:
>100_bases TCCGGATCGCCGCGGTCGGGGACATCCACCTGGGCACCGACTCGCGTGGGTCCTTCGCGCCCTGCCTGGCCGGGATCGGC GACCTGGCCGACGTCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAMDDAPRGLRESLKRVAVTLKEAEIPFALGGSYACWARGGPEPVHDVDFMLREADVPRAVEVLCAGGLRPVDPPEDWLT KVFDGDVLVDLIHHPVGRAVTDEMLARSSEMSVDSVRMPVLDATDWFEMTLLALDERYCDLGRVIPMIRAMREQVDWEQV RRATAESPFAEAVLLVATRLKLIPPHVVTPPRAARAVDAVDGVGAAGAAEPVAVLDVTEPAEYLAGDLHERLAEDPRVAE LGLDVAVGPEGITVRGEVATEARRRAVDAVLADAVPGRPVRNDVIVSKRDSPSTMESVS
Sequences:
>Translated_299_residues MAMDDAPRGLRESLKRVAVTLKEAEIPFALGGSYACWARGGPEPVHDVDFMLREADVPRAVEVLCAGGLRPVDPPEDWLT KVFDGDVLVDLIHHPVGRAVTDEMLARSSEMSVDSVRMPVLDATDWFEMTLLALDERYCDLGRVIPMIRAMREQVDWEQV RRATAESPFAEAVLLVATRLKLIPPHVVTPPRAARAVDAVDGVGAAGAAEPVAVLDVTEPAEYLAGDLHERLAEDPRVAE LGLDVAVGPEGITVRGEVATEARRRAVDAVLADAVPGRPVRNDVIVSKRDSPSTMESVS >Mature_298_residues AMDDAPRGLRESLKRVAVTLKEAEIPFALGGSYACWARGGPEPVHDVDFMLREADVPRAVEVLCAGGLRPVDPPEDWLTK VFDGDVLVDLIHHPVGRAVTDEMLARSSEMSVDSVRMPVLDATDWFEMTLLALDERYCDLGRVIPMIRAMREQVDWEQVR RATAESPFAEAVLLVATRLKLIPPHVVTPPRAARAVDAVDGVGAAGAAEPVAVLDVTEPAEYLAGDLHERLAEDPRVAEL GLDVAVGPEGITVRGEVATEARRRAVDAVLADAVPGRPVRNDVIVSKRDSPSTMESVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32346; Mature: 32215
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDDAPRGLRESLKRVAVTLKEAEIPFALGGSYACWARGGPEPVHDVDFMLREADVPRA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCCHH VEVLCAGGLRPVDPPEDWLTKVFDGDVLVDLIHHPVGRAVTDEMLARSSEMSVDSVRMPV HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCC LDATDWFEMTLLALDERYCDLGRVIPMIRAMREQVDWEQVRRATAESPFAEAVLLVATRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KLIPPHVVTPPRAARAVDAVDGVGAAGAAEPVAVLDVTEPAEYLAGDLHERLAEDPRVAE HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHH LGLDVAVGPEGITVRGEVATEARRRAVDAVLADAVPGRPVRNDVIVSKRDSPSTMESVS HCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHCC >Mature Secondary Structure AMDDAPRGLRESLKRVAVTLKEAEIPFALGGSYACWARGGPEPVHDVDFMLREADVPRA CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCCHH VEVLCAGGLRPVDPPEDWLTKVFDGDVLVDLIHHPVGRAVTDEMLARSSEMSVDSVRMPV HHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCC LDATDWFEMTLLALDERYCDLGRVIPMIRAMREQVDWEQVRRATAESPFAEAVLLVATRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KLIPPHVVTPPRAARAVDAVDGVGAAGAAEPVAVLDVTEPAEYLAGDLHERLAEDPRVAE HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHH LGLDVAVGPEGITVRGEVATEARRRAVDAVLADAVPGRPVRNDVIVSKRDSPSTMESVS HCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA