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The map label for this gene is ylbK [H]

Identifier: 158318200

GI number: 158318200

Start: 7858778

End: 7859638

Strand: Reverse

Name: ylbK [H]

Synonym: Franean1_6465

Alternate gene names: 158318200

Gene position: 7859638-7858778 (Counterclockwise)

Preceding gene: 158318202

Following gene: 158318199

Centisome position: 87.5

GC content: 74.8

Gene sequence:

>861_bases
GTGACCAGCATTCCGCCCGAGAAACAGCCGGGGCCGGTCGCGTTCGTGCTCGGCGGCGGCGGTGTCCTGGGCGCCGCCGA
GGTGGGAATGCTCGACGCGCTCCTGGCCGCGGGCGTCCGCCCCGACCTGGTCGTCGGGACCTCCGTGGGCGCCATCAACG
GTGCCGCGGTCGCCGCCGACCCGTCCAGAGCCGCGATCGGGCGGCTGACCGAGCTGTGGGCCGACCTGGGCAGCTCGGAC
GTCTTCGCCGGCGGGCCGGCCAAACGGCTGGCCACCGTCGTCCAGCACGGCTACCTGCACTCGAACGCGCCGCTGCGCCG
GATACTGAAGGCGAACCTGCCGTCCTCCTTCGAGCGGCTGGCGGTGCCCTTCCAGTGCGTGGCGGCCAGCGTCGAACGTG
CGGCCGCGCACTGGTTCGACCGCGGCCCGCTCGTCGACGCCGTCCTGGCGTCGTGCGCGGTGCCCGCGCTGCTACCCCCG
GTCAAGATCGGGGACGAGCACTTCGTCGACGGCGGCCTTATCGACAGCACTCCCGTGGGCCGGGCGGTGATGCTGGGCGC
GCGAACGGTCTACGTCCTGCACGTCGGGCGGATCGAGCGGCCGCTGCGCCCCGGCCGCTGGCCGTGGGAGGCCGGCCTCG
TGGCCTTCGAGATCGCCCGCCGCCGCGGCTTCGCCGACGCGATGGCCGCCCTGCCGGCGGATGTCGCCGTCCACCTGCTG
CCGATCGGTGACGCCACCGGGGTACCACTGGTCGGGCTGCGATACCGGTCCGCCTCCGGGGTCCGCCGCCGGATCGAACG
CGCCCGCCAGGCCACAGCCGACTACCTCGACCTCCTGGCGGCTCCGGGGCGTGAGGCGTGA

Upstream 100 bases:

>100_bases
CCACCCGTCCCGGACGACCGGGGATGAGGAGGCCACAGGGGGGCGCAGACGCCGCCGGACCATCGGGTTCCGGGCTGGTT
CGGCGGGGTAGCAGGCTGCG

Downstream 100 bases:

>100_bases
GAGTGCCACCAAGGGCGATCCGCCGCCTCGTGATCGATCCTCTGTTCATCCCGGTCGCGGTGGGCGGCGCGGTACTCGGT
GTCCTGGTGACTCTGCTCGG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTSIPPEKQPGPVAFVLGGGGVLGAAEVGMLDALLAAGVRPDLVVGTSVGAINGAAVAADPSRAAIGRLTELWADLGSSD
VFAGGPAKRLATVVQHGYLHSNAPLRRILKANLPSSFERLAVPFQCVAASVERAAAHWFDRGPLVDAVLASCAVPALLPP
VKIGDEHFVDGGLIDSTPVGRAVMLGARTVYVLHVGRIERPLRPGRWPWEAGLVAFEIARRRGFADAMAALPADVAVHLL
PIGDATGVPLVGLRYRSASGVRRRIERARQATADYLDLLAAPGREA

Sequences:

>Translated_286_residues
MTSIPPEKQPGPVAFVLGGGGVLGAAEVGMLDALLAAGVRPDLVVGTSVGAINGAAVAADPSRAAIGRLTELWADLGSSD
VFAGGPAKRLATVVQHGYLHSNAPLRRILKANLPSSFERLAVPFQCVAASVERAAAHWFDRGPLVDAVLASCAVPALLPP
VKIGDEHFVDGGLIDSTPVGRAVMLGARTVYVLHVGRIERPLRPGRWPWEAGLVAFEIARRRGFADAMAALPADVAVHLL
PIGDATGVPLVGLRYRSASGVRRRIERARQATADYLDLLAAPGREA
>Mature_285_residues
TSIPPEKQPGPVAFVLGGGGVLGAAEVGMLDALLAAGVRPDLVVGTSVGAINGAAVAADPSRAAIGRLTELWADLGSSDV
FAGGPAKRLATVVQHGYLHSNAPLRRILKANLPSSFERLAVPFQCVAASVERAAAHWFDRGPLVDAVLASCAVPALLPPV
KIGDEHFVDGGLIDSTPVGRAVMLGARTVYVLHVGRIERPLRPGRWPWEAGLVAFEIARRRGFADAMAALPADVAVHLLP
IGDATGVPLVGLRYRSASGVRRRIERARQATADYLDLLAAPGREA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=188, Percent_Identity=32.9787234042553, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI116256487, Length=188, Percent_Identity=32.9787234042553, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI260656039, Length=188, Percent_Identity=32.9787234042553, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI260656037, Length=188, Percent_Identity=32.9787234042553, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI260656043, Length=188, Percent_Identity=32.9787234042553, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI148727335, Length=186, Percent_Identity=30.1075268817204, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI148727290, Length=186, Percent_Identity=30.1075268817204, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI226510936, Length=180, Percent_Identity=30, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=208, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29806; Mature: 29675

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIPPEKQPGPVAFVLGGGGVLGAAEVGMLDALLAAGVRPDLVVGTSVGAINGAAVAAD
CCCCCCCCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECC
PSRAAIGRLTELWADLGSSDVFAGGPAKRLATVVQHGYLHSNAPLRRILKANLPSSFERL
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
AVPFQCVAASVERAAAHWFDRGPLVDAVLASCAVPALLPPVKIGDEHFVDGGLIDSTPVG
HCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RAVMLGARTVYVLHVGRIERPLRPGRWPWEAGLVAFEIARRRGFADAMAALPADVAVHLL
CEEHCCCCEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEE
PIGDATGVPLVGLRYRSASGVRRRIERARQATADYLDLLAAPGREA
ECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSIPPEKQPGPVAFVLGGGGVLGAAEVGMLDALLAAGVRPDLVVGTSVGAINGAAVAAD
CCCCCCCCCCCEEEEEECCCEECHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEECC
PSRAAIGRLTELWADLGSSDVFAGGPAKRLATVVQHGYLHSNAPLRRILKANLPSSFERL
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
AVPFQCVAASVERAAAHWFDRGPLVDAVLASCAVPALLPPVKIGDEHFVDGGLIDSTPVG
HCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RAVMLGARTVYVLHVGRIERPLRPGRWPWEAGLVAFEIARRRGFADAMAALPADVAVHLL
CEEHCCCCEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEE
PIGDATGVPLVGLRYRSASGVRRRIERARQATADYLDLLAAPGREA
ECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]