| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is dnaJ [C]
Identifier: 158318191
GI number: 158318191
Start: 7849889
End: 7850866
Strand: Direct
Name: dnaJ [C]
Synonym: Franean1_6456
Alternate gene names: 158318191
Gene position: 7849889-7850866 (Clockwise)
Preceding gene: 158318190
Following gene: 158318192
Centisome position: 87.4
GC content: 76.28
Gene sequence:
>978_bases ATGCGTGATACGCCAAAAAGCCAGTCGGCCCAGTACTTGCGGGCCTCGATGTACGAGGTGCTCGGGATCGCACCCACGGC TTCGGACGAGGAGGTCCATGCCGCCTATCGGCGCGTGGTGAAACGCGCCCATCCGGACGCCGGCGGATCCCAACGCGCGT TCCTCCGGGTGAACGCGGCGTACCGGGTGTTGAGCGACCCCGGTATGCGGCGAGCCCACGATCTGTGGCTCGCCCATCTG CTCGACGCATATGACCAGCCGGGACGCTCCGGCGGCGCGCGCCCGCCCGGCGGGCGGGCCGCGCCCGGCGGGCGCCACCC CGCCGACGGGCGTCCCGGATCCGACGGACGAACGAACCCGGGCGGGCGCACGTCGCCCGGCGGGCAGGCGGACAACCCCG GACGGGGGGCTTCCGGCAATCGGGGCACCTCGGATGACCCGGCACCCCCCTCGGGGGGTGCCGCCCCGGGCCGGCGGGGA GCGTCCGGCCGGGCCTCCGATCAGAGGGGGCCAGGCAAGGGCACGGACTCCGCCAGCGGATGGGGCGAGGCCGGTGGCTG GGCCGCCACCGGTGGCTGGGGCGATGCCACTGCCGCTCCCCTACCCGAGGATGGCCGGGCGTCCGGCGGGCGGCGACGCT CGCGCCGGCGCCCACCAGCCGACGCCGCCGAGTGGGTCGTGGGGCCCGACCAGGCCATGACACCGGACGGCGGCCCAGCC GGGCCGCCCCCGTACGAGGCACCCGGCGGGGCCGCGACCTGGGCCACCTGGCCGGACGAGGACTACCCCACGCGGGGTCC CGGCCGGCGGGCACGGCGCAGGTACCTGGTCTCGATGGCGCTGTGCCTGGCCCTGTTCGTGCTGGCGGGCGCGGTGGTGC GGCTCTACTCCGTCCCGGTGGCGATGGGCATGATGCTGGCCTCGATGGTGATCCCGCCGGTGGCGGTCCTCGCGGTCAAC GCCGCACGCCGCCGCTGA
Upstream 100 bases:
>100_bases GCTCACCGCGATCGCCGGCGGTCGACCCGCGAGATCCCGCCTACGGTGGGAACAGGTCGACGCGACGCCCCACTGCAACG GGCGCCGGGAGGTGATCGCC
Downstream 100 bases:
>100_bases CACGATTCCCCGTCAGCGGCGGCTCACCGGCTCGGGAGCCGAGTCCGGCGCGGAGTCGGGCGCCGGACTCGGCTCCTACC TCCGTGCCGGGCTCGGCTCG
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN AARRR
Sequences:
>Translated_325_residues MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN AARRR >Mature_325_residues MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN AARRR
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33599; Mature: 33599
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH YRVLSDPGMRRAHDLWLAHLLDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNP HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRGASGRASDQRGPGKGTDSASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEECCCCCCCCCCCCC GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGMMLASMVIPPVAVLAVNAARRR HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH YRVLSDPGMRRAHDLWLAHLLDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNP HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRGASGRASDQRGPGKGTDSASG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEECCCCCCCCCCCCC GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGMMLASMVIPPVAVLAVNAARRR HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA