Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is dnaJ [C]

Identifier: 158318191

GI number: 158318191

Start: 7849889

End: 7850866

Strand: Direct

Name: dnaJ [C]

Synonym: Franean1_6456

Alternate gene names: 158318191

Gene position: 7849889-7850866 (Clockwise)

Preceding gene: 158318190

Following gene: 158318192

Centisome position: 87.4

GC content: 76.28

Gene sequence:

>978_bases
ATGCGTGATACGCCAAAAAGCCAGTCGGCCCAGTACTTGCGGGCCTCGATGTACGAGGTGCTCGGGATCGCACCCACGGC
TTCGGACGAGGAGGTCCATGCCGCCTATCGGCGCGTGGTGAAACGCGCCCATCCGGACGCCGGCGGATCCCAACGCGCGT
TCCTCCGGGTGAACGCGGCGTACCGGGTGTTGAGCGACCCCGGTATGCGGCGAGCCCACGATCTGTGGCTCGCCCATCTG
CTCGACGCATATGACCAGCCGGGACGCTCCGGCGGCGCGCGCCCGCCCGGCGGGCGGGCCGCGCCCGGCGGGCGCCACCC
CGCCGACGGGCGTCCCGGATCCGACGGACGAACGAACCCGGGCGGGCGCACGTCGCCCGGCGGGCAGGCGGACAACCCCG
GACGGGGGGCTTCCGGCAATCGGGGCACCTCGGATGACCCGGCACCCCCCTCGGGGGGTGCCGCCCCGGGCCGGCGGGGA
GCGTCCGGCCGGGCCTCCGATCAGAGGGGGCCAGGCAAGGGCACGGACTCCGCCAGCGGATGGGGCGAGGCCGGTGGCTG
GGCCGCCACCGGTGGCTGGGGCGATGCCACTGCCGCTCCCCTACCCGAGGATGGCCGGGCGTCCGGCGGGCGGCGACGCT
CGCGCCGGCGCCCACCAGCCGACGCCGCCGAGTGGGTCGTGGGGCCCGACCAGGCCATGACACCGGACGGCGGCCCAGCC
GGGCCGCCCCCGTACGAGGCACCCGGCGGGGCCGCGACCTGGGCCACCTGGCCGGACGAGGACTACCCCACGCGGGGTCC
CGGCCGGCGGGCACGGCGCAGGTACCTGGTCTCGATGGCGCTGTGCCTGGCCCTGTTCGTGCTGGCGGGCGCGGTGGTGC
GGCTCTACTCCGTCCCGGTGGCGATGGGCATGATGCTGGCCTCGATGGTGATCCCGCCGGTGGCGGTCCTCGCGGTCAAC
GCCGCACGCCGCCGCTGA

Upstream 100 bases:

>100_bases
GCTCACCGCGATCGCCGGCGGTCGACCCGCGAGATCCCGCCTACGGTGGGAACAGGTCGACGCGACGCCCCACTGCAACG
GGCGCCGGGAGGTGATCGCC

Downstream 100 bases:

>100_bases
CACGATTCCCCGTCAGCGGCGGCTCACCGGCTCGGGAGCCGAGTCCGGCGCGGAGTCGGGCGCCGGACTCGGCTCCTACC
TCCGTGCCGGGCTCGGCTCG

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL
LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG
ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA
GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN
AARRR

Sequences:

>Translated_325_residues
MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL
LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG
ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA
GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN
AARRR
>Mature_325_residues
MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAAYRVLSDPGMRRAHDLWLAHL
LDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNPGGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRG
ASGRASDQRGPGKGTDSASGWGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA
GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPVAMGMMLASMVIPPVAVLAVN
AARRR

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33599; Mature: 33599

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH
YRVLSDPGMRRAHDLWLAHLLDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNP
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRGASGRASDQRGPGKGTDSASG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEECCCCCCCCCCCCC
GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGMMLASMVIPPVAVLAVNAARRR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDTPKSQSAQYLRASMYEVLGIAPTASDEEVHAAYRRVVKRAHPDAGGSQRAFLRVNAA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCH
YRVLSDPGMRRAHDLWLAHLLDAYDQPGRSGGARPPGGRAAPGGRHPADGRPGSDGRTNP
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRTSPGGQADNPGRGASGNRGTSDDPAPPSGGAAPGRRGASGRASDQRGPGKGTDSASG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WGEAGGWAATGGWGDATAAPLPEDGRASGGRRRSRRRPPADAAEWVVGPDQAMTPDGGPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEECCCCCCCCCCCCC
GPPPYEAPGGAATWATWPDEDYPTRGPGRRARRRYLVSMALCLALFVLAGAVVRLYSVPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGMMLASMVIPPVAVLAVNAARRR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA