Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318181

Identifier: 158318181

GI number: 158318181

Start: 7839224

End: 7840411

Strand: Direct

Name: 158318181

Synonym: Franean1_6446

Alternate gene names: NA

Gene position: 7839224-7840411 (Clockwise)

Preceding gene: 158318180

Following gene: 158318182

Centisome position: 87.28

GC content: 73.15

Gene sequence:

>1188_bases
TTGCCCACGGAATCCAGGCTCGGCCGGTCGGGGCGCGGCCAGTCGGGCGCAACGCTGACGACCCTGCAGCGGGTCACGGT
CGTCGGCCTTGTGGCGCTCTCCGCCGCGGTGGCGATCGGCCTCGGACTGACCGCCCGCGACGACCCGCCGGGCACGGCCT
GGCCGCCGGGGCGGCAGGCGACGTCCTGCCACGACGTGAAGATCTTCACCGGCCAGGTGGGATCGCCCTACAACCGGTTC
GCGCGGGTGCTGCGCACCCGGCTGCAGGCCGCGCCCGAGCACTGGGACGTCGAGGTCGTCCCGACCGGCGGCTCCGCGGA
GAACATCTACCACCTGGAGGAACAGCAGTACCGGACGTGCTCGCTGGCGCTGGCCCAGCTCGGCACGACCGTGGACGCCG
GGTCGGCGGTCAACCAGTTCTCGCCCCAGCGGGGCGGCCACCTCGTCGAGGGGCTGCGCACGCTCGGGCCCGCCCACGAC
GACCTCCTCCACGTGATCGTCCGCGCGCCCGGGGGCAGCCCGCCCGGCACCGGCGCGGACGTGCGAACCTTCACCGACCT
CTGCGACCGGACCATCGCCGCCGGGCCGCAGAACTCGGGCACTCGCCAGATCGGTGATGTGCTCCTCCGCGTCGGCCTGC
CGAGCACGTGCACCCCCCGACTGGAGGACGCCTCCATCGACGACGGGCTGCGGCTGCTGGTCGCCGGCGCCGTGGACGCG
GTGTTCTGGGCCGGGGGCGCCGGCACCGAGCGCATCCGGACCGAGCTCGCCAACGGCGCGAAACTACAGGTCCTCAACCT
GGGGCAGTTCCGCGACGCGATCACCGCGGACTGGGAGAAGGTCTACCACCCGTCTGGGCGGTACTTCTCCGGAACGGTCT
TCCCCCCGGGGCATCTCGGGCCACAGGACTACCCGGGAATGAGCGACGTGGACACCGTCTCGCTGCCCAACGGCGTCCTG
GCGCACGAACAGGCCGATCCGGCGCTGGTCCGGCGGGCGACGGCCGACCTCTTCGCCGATCCGGCCGAATACGAGCGGGC
GCTGTGGGGCGACAACCCCGCCGCCCGCCACGTCCCGGACGCGCTGACCGTCTACGAAAGCCCGCTGTTCTGCTACGTCC
CGCTGCATCCGGCCGCCGCCGAGTACTACCAGCTCGAGTTTCGCCGCGGGCCCGACTGTGGCCGGTAG

Upstream 100 bases:

>100_bases
GCCGTTGTTCGGCAACGAACAGTACGCGGAGGACGACGGACGGCGCGATTTCGGGTCGTCGCGGGCTCAGCAGACGCGAT
CGGACGCGGAAGGACGAGGG

Downstream 100 bases:

>100_bases
CGGCGCGGCGGTGGCAGTGACGCCGACGGCGACGGCGACCGCGGCCGTGGCCGTGACGGCGGCGGCCCGGCTCCGGCCGC
GCGGGGGTGGGCCGTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TIR Protein; TRAP Transport System Solute Receptor; TRAP Transporter Solute Receptor; Trap Transporter Solute Receptor Taxi Family

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MPTESRLGRSGRGQSGATLTTLQRVTVVGLVALSAAVAIGLGLTARDDPPGTAWPPGRQATSCHDVKIFTGQVGSPYNRF
ARVLRTRLQAAPEHWDVEVVPTGGSAENIYHLEEQQYRTCSLALAQLGTTVDAGSAVNQFSPQRGGHLVEGLRTLGPAHD
DLLHVIVRAPGGSPPGTGADVRTFTDLCDRTIAAGPQNSGTRQIGDVLLRVGLPSTCTPRLEDASIDDGLRLLVAGAVDA
VFWAGGAGTERIRTELANGAKLQVLNLGQFRDAITADWEKVYHPSGRYFSGTVFPPGHLGPQDYPGMSDVDTVSLPNGVL
AHEQADPALVRRATADLFADPAEYERALWGDNPAARHVPDALTVYESPLFCYVPLHPAAAEYYQLEFRRGPDCGR

Sequences:

>Translated_395_residues
MPTESRLGRSGRGQSGATLTTLQRVTVVGLVALSAAVAIGLGLTARDDPPGTAWPPGRQATSCHDVKIFTGQVGSPYNRF
ARVLRTRLQAAPEHWDVEVVPTGGSAENIYHLEEQQYRTCSLALAQLGTTVDAGSAVNQFSPQRGGHLVEGLRTLGPAHD
DLLHVIVRAPGGSPPGTGADVRTFTDLCDRTIAAGPQNSGTRQIGDVLLRVGLPSTCTPRLEDASIDDGLRLLVAGAVDA
VFWAGGAGTERIRTELANGAKLQVLNLGQFRDAITADWEKVYHPSGRYFSGTVFPPGHLGPQDYPGMSDVDTVSLPNGVL
AHEQADPALVRRATADLFADPAEYERALWGDNPAARHVPDALTVYESPLFCYVPLHPAAAEYYQLEFRRGPDCGR
>Mature_394_residues
PTESRLGRSGRGQSGATLTTLQRVTVVGLVALSAAVAIGLGLTARDDPPGTAWPPGRQATSCHDVKIFTGQVGSPYNRFA
RVLRTRLQAAPEHWDVEVVPTGGSAENIYHLEEQQYRTCSLALAQLGTTVDAGSAVNQFSPQRGGHLVEGLRTLGPAHDD
LLHVIVRAPGGSPPGTGADVRTFTDLCDRTIAAGPQNSGTRQIGDVLLRVGLPSTCTPRLEDASIDDGLRLLVAGAVDAV
FWAGGAGTERIRTELANGAKLQVLNLGQFRDAITADWEKVYHPSGRYFSGTVFPPGHLGPQDYPGMSDVDTVSLPNGVLA
HEQADPALVRRATADLFADPAEYERALWGDNPAARHVPDALTVYESPLFCYVPLHPAAAEYYQLEFRRGPDCGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42127; Mature: 41995

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTESRLGRSGRGQSGATLTTLQRVTVVGLVALSAAVAIGLGLTARDDPPGTAWPPGRQA
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TSCHDVKIFTGQVGSPYNRFARVLRTRLQAAPEHWDVEVVPTGGSAENIYHLEEQQYRTC
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECHHHHHHHH
SLALAQLGTTVDAGSAVNQFSPQRGGHLVEGLRTLGPAHDDLLHVIVRAPGGSPPGTGAD
HHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCH
VRTFTDLCDRTIAAGPQNSGTRQIGDVLLRVGLPSTCTPRLEDASIDDGLRLLVAGAVDA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VFWAGGAGTERIRTELANGAKLQVLNLGQFRDAITADWEKVYHPSGRYFSGTVFPPGHLG
HHCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
PQDYPGMSDVDTVSLPNGVLAHEQADPALVRRATADLFADPAEYERALWGDNPAARHVPD
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCC
ALTVYESPLFCYVPLHPAAAEYYQLEFRRGPDCGR
HHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
PTESRLGRSGRGQSGATLTTLQRVTVVGLVALSAAVAIGLGLTARDDPPGTAWPPGRQA
CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TSCHDVKIFTGQVGSPYNRFARVLRTRLQAAPEHWDVEVVPTGGSAENIYHLEEQQYRTC
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECHHHHHHHH
SLALAQLGTTVDAGSAVNQFSPQRGGHLVEGLRTLGPAHDDLLHVIVRAPGGSPPGTGAD
HHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCH
VRTFTDLCDRTIAAGPQNSGTRQIGDVLLRVGLPSTCTPRLEDASIDDGLRLLVAGAVDA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VFWAGGAGTERIRTELANGAKLQVLNLGQFRDAITADWEKVYHPSGRYFSGTVFPPGHLG
HHCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
PQDYPGMSDVDTVSLPNGVLAHEQADPALVRRATADLFADPAEYERALWGDNPAARHVPD
CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCC
ALTVYESPLFCYVPLHPAAAEYYQLEFRRGPDCGR
HHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA