Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318117

Identifier: 158318117

GI number: 158318117

Start: 7746079

End: 7747323

Strand: Reverse

Name: 158318117

Synonym: Franean1_6381

Alternate gene names: NA

Gene position: 7747323-7746079 (Counterclockwise)

Preceding gene: 158318118

Following gene: 158318116

Centisome position: 86.25

GC content: 62.97

Gene sequence:

>1245_bases
ATGACGCTGAAAGTTTTCATCAGCTATGCCCGGAAGAACGACCGGCGCAAGCACATTACAATCTTCCGGCAGGATCTACA
GAACGAGCTCGAGCAGCAGATAGGTGGGGAGCCGGTCGAGGTTTTTCTCGACCGGGATCTCACGCCGGGGGCCGACTGGA
AGTCGGACATCGAGAACGAGCTCAACACGTGCGATTTCTTCATCCCCATCTGCACCGAGAGCTATTTCCAGTCCGCGGCC
TGCGCCGAGGAGTGGGGGCTGTTCCGTCGCCGTCTGTTCGAGGCGGTGAGGTACGGTGACAAGCGGCCGTCCCGGATCAT
CCCCATCTGGTGGAAGCGGATGAGCTACATACCGCCGATCGTCAAGGCTTACCAGCTCACGATCGACGGCAACCCGCACA
CCACGAAGAGGGGCCTCTTTGATGACCTGATCGAGAATCGGGATTTCGGAGCGTACCCGATGGCCGTCCAGCATCTCGCC
GAGCAGATCAAGAAGGTGCACAAGGCAAAAGCCTCGCGGGACTGGCGGCCGCGAAGCCCGCAGCTGAGGATGGACGGGCG
GAACTTTGCGTTCGAGCCGGGCCAGTTCGGCAGGGACGACGTCCTGAAGTGCCATCTGGTATATGCGGTGGCCAAGAAAG
AACAGCTGAACGGACGGCTGGTCCCGGATGAGGGCGCGTATCATGAGTCCGTCGACGAGTGGGACCCGTTCCGCAGGCGC
GCGGCCTCCTCGGGGCATCCGATGACCCACTGGGACGCGATGACGAGCTACCCGGCGCTCGGTCTGAGCTGGGCACTTCA
CATGCTGAACATAGAGGTGATCGGCGAGCCGCTACCCGCCTTCGAGGAATGGAATGCCGCGACAGTGAGATCGATCAGGC
GAAAGGGGACGCCGATGATCGCTTTGTTCGATCGCACGGATCCTATCGGGGCTCGAATCTGGATGATATCTACAATTCAG
CCGACGCAGGCTCGAAAAAGAGTCGTGATTTCTCCGCTGCCCGAAGCTGTCGCCGGGACCGAGAGCACCACGGGCGCCGT
GGGAGTGCAGAGTGCCGCAAGCGCCGCGGATTCCGCGGGCGCCGCCGGAGCCGCCCGCAGCGATCCTCGCTACATATTCG
AGTGCGTGCGGGCGACGACTGAGATCGTCGCCGCTGTCCGGCGCAGTGCGGAGCACCACTGGCCCGACGGGTCGGGCGGC
GACGGCGGGCCACTGGTGACCAACCCCTACGATCTGGGCACCTGA

Upstream 100 bases:

>100_bases
GCACCGGGCCTGCGGCCGCGGTGGACGGGGAACCGGATCCCGCCACGGAACCGGTAGCCCCGCCGCCGGGCGGATCGCGG
GTCGGGGAGGTGAACCGGGC

Downstream 100 bases:

>100_bases
GATGCCCGGCACGGTGGTCACCTTCTACTCGTACAAGGGTGGCGTCGGGCGTTCTCTCGCACTCGCCTGGGTAGCCTGGA
TCCTCGCCTCGGCCGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTLKVFISYARKNDRRKHITIFRQDLQNELEQQIGGEPVEVFLDRDLTPGADWKSDIENELNTCDFFIPICTESYFQSAA
CAEEWGLFRRRLFEAVRYGDKRPSRIIPIWWKRMSYIPPIVKAYQLTIDGNPHTTKRGLFDDLIENRDFGAYPMAVQHLA
EQIKKVHKAKASRDWRPRSPQLRMDGRNFAFEPGQFGRDDVLKCHLVYAVAKKEQLNGRLVPDEGAYHESVDEWDPFRRR
AASSGHPMTHWDAMTSYPALGLSWALHMLNIEVIGEPLPAFEEWNAATVRSIRRKGTPMIALFDRTDPIGARIWMISTIQ
PTQARKRVVISPLPEAVAGTESTTGAVGVQSAASAADSAGAAGAARSDPRYIFECVRATTEIVAAVRRSAEHHWPDGSGG
DGGPLVTNPYDLGT

Sequences:

>Translated_414_residues
MTLKVFISYARKNDRRKHITIFRQDLQNELEQQIGGEPVEVFLDRDLTPGADWKSDIENELNTCDFFIPICTESYFQSAA
CAEEWGLFRRRLFEAVRYGDKRPSRIIPIWWKRMSYIPPIVKAYQLTIDGNPHTTKRGLFDDLIENRDFGAYPMAVQHLA
EQIKKVHKAKASRDWRPRSPQLRMDGRNFAFEPGQFGRDDVLKCHLVYAVAKKEQLNGRLVPDEGAYHESVDEWDPFRRR
AASSGHPMTHWDAMTSYPALGLSWALHMLNIEVIGEPLPAFEEWNAATVRSIRRKGTPMIALFDRTDPIGARIWMISTIQ
PTQARKRVVISPLPEAVAGTESTTGAVGVQSAASAADSAGAAGAARSDPRYIFECVRATTEIVAAVRRSAEHHWPDGSGG
DGGPLVTNPYDLGT
>Mature_413_residues
TLKVFISYARKNDRRKHITIFRQDLQNELEQQIGGEPVEVFLDRDLTPGADWKSDIENELNTCDFFIPICTESYFQSAAC
AEEWGLFRRRLFEAVRYGDKRPSRIIPIWWKRMSYIPPIVKAYQLTIDGNPHTTKRGLFDDLIENRDFGAYPMAVQHLAE
QIKKVHKAKASRDWRPRSPQLRMDGRNFAFEPGQFGRDDVLKCHLVYAVAKKEQLNGRLVPDEGAYHESVDEWDPFRRRA
ASSGHPMTHWDAMTSYPALGLSWALHMLNIEVIGEPLPAFEEWNAATVRSIRRKGTPMIALFDRTDPIGARIWMISTIQP
TQARKRVVISPLPEAVAGTESTTGAVGVQSAASAADSAGAAGAARSDPRYIFECVRATTEIVAAVRRSAEHHWPDGSGGD
GGPLVTNPYDLGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46608; Mature: 46477

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKVFISYARKNDRRKHITIFRQDLQNELEQQIGGEPVEVFLDRDLTPGADWKSDIENE
CEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
LNTCDFFIPICTESYFQSAACAEEWGLFRRRLFEAVRYGDKRPSRIIPIWWKRMSYIPPI
HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC
VKAYQLTIDGNPHTTKRGLFDDLIENRDFGAYPMAVQHLAEQIKKVHKAKASRDWRPRSP
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLRMDGRNFAFEPGQFGRDDVLKCHLVYAVAKKEQLNGRLVPDEGAYHESVDEWDPFRRR
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCHHHHH
AASSGHPMTHWDAMTSYPALGLSWALHMLNIEVIGEPLPAFEEWNAATVRSIRRKGTPMI
HCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHCCCCEE
ALFDRTDPIGARIWMISTIQPTQARKRVVISPLPEAVAGTESTTGAVGVQSAASAADSAG
EEEECCCCCCEEEEEEEECCCHHHHCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCC
AAGAARSDPRYIFECVRATTEIVAAVRRSAEHHWPDGSGGDGGPLVTNPYDLGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKVFISYARKNDRRKHITIFRQDLQNELEQQIGGEPVEVFLDRDLTPGADWKSDIENE
EEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
LNTCDFFIPICTESYFQSAACAEEWGLFRRRLFEAVRYGDKRPSRIIPIWWKRMSYIPPI
HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC
VKAYQLTIDGNPHTTKRGLFDDLIENRDFGAYPMAVQHLAEQIKKVHKAKASRDWRPRSP
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLRMDGRNFAFEPGQFGRDDVLKCHLVYAVAKKEQLNGRLVPDEGAYHESVDEWDPFRRR
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHCCHHHHH
AASSGHPMTHWDAMTSYPALGLSWALHMLNIEVIGEPLPAFEEWNAATVRSIRRKGTPMI
HCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHCCCCEE
ALFDRTDPIGARIWMISTIQPTQARKRVVISPLPEAVAGTESTTGAVGVQSAASAADSAG
EEEECCCCCCEEEEEEEECCCHHHHCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCC
AAGAARSDPRYIFECVRATTEIVAAVRRSAEHHWPDGSGGDGGPLVTNPYDLGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA