| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318086
Identifier: 158318086
GI number: 158318086
Start: 7708485
End: 7709810
Strand: Reverse
Name: 158318086
Synonym: Franean1_6349
Alternate gene names: NA
Gene position: 7709810-7708485 (Counterclockwise)
Preceding gene: 158318087
Following gene: 158318084
Centisome position: 85.84
GC content: 73.3
Gene sequence:
>1326_bases ATGACAGAGCTGGGACCGGAGCGGGAGCCGGCGGTAGCGGCGCCGGGTACCGGGCTGGGGGCGGTCTCGACCGACGAGGA GCTGCGCGACGCGGTCCTGGCCCTGCTGGGCACCTCCTATGACCGTGCGGTGGAGAGCCGCACCGGCCTGTCCAAGACCA CGGTGAACGACCTACGTAACGGACGCCGCCGGCTGACCCTGAAGACCCTCACCCTGATCGTGGAGACATACGACCCGACG CGTCGTGACGCCTGGTTGGACGCGTGGCACCGGCTGCACCCGCGTGCTGTGCCGCGGGTCCCCCGACCAGCGGAGCCGCC CGCCCGGCCGGCTGGTCCCGGTTCCCGCCCGTCCGTGGTTGCCAACCCGGAGGCCCTGGACCGTGACGAACCCGACGATC CCGCAGACTGTCCTGCCCCGCTCGATCGGCCGCAGCGTGCAGAGGGCCCGGATCCCGCTGACGATCCCTCCCGGGCCGAC GGCCCCGACCCCGCCGGTGACCCGCAACGCGTCGGCCGTCCCACACATGCGGCACCGGCCAGCAGTCCGGCCGCGCCCGG CTTGCCGTGGCGGACCGTTCGGCTGCTGGCCGGTGCCGCATTCGTCGCCGCTGTGGCGGCCGTTGTCGCCGCGGTGCTCG TCCTGACCGGCGGCGATTCCGCCGTCAATCCGGAGCCGGGCGGCGGGCCGCCCCCGCCGGGACCGGTGGGCGCCGCGGGT CTGCCGCCCTACGGCCCAGGGGGCCCCGGAGCCGCTGCTCCAGTCGGCGGACCCGGTCCGCCGCCGGCCATCGGCGCGCG GCCGGCGGCCGACGCCGAAACCGCCGTACCCGGCGGGTGCTATAGCCTGCCGCTGCCGACCAGGGCAGATGTCATCGACG GGCAGGGCAGCGAGACCACCGGCATCCGGCTGACGGCCGCGTCGTACAGCTACTTTGCGGCGTGGAACCCGTCTGCGGCG GTGGGTGGCAGGCTCAGCGGCCCGCCGGCCGCGGGCCGGCGTTTCGTGGGTGCGGCGTGGGCGGATCCAGCGACGACAGA CTCCACGCCCGCTCATCACCCCGGCAACGGCAGATTTTATCCCGGTGAAGTGCTGGAGCTGACCGACCAGAACTGCTTCA CGGTCCAGCCCTACAACATCGGGTACGGCGGGTACTCGGGCATCACGACGCGTATCTACGTCTTGTCAATAGGCGCGCCA GACATCTCGGTGCTCCCACGGGAGGCCCACCAGCGCGCCGGCCTGACCGAGGACGACCTAGAGCGGCACGGCGTCGACGT GCTCGGCTACTTCGCTGTCCCGTCGCCGGCATGGTCCGGCGGTTGA
Upstream 100 bases:
>100_bases GCGACCGAGGCGCGGCGGATGGTCATGCCGTGATGGTGGCCGCCCACCGGTCGGGACGCCGGGTGAAGGTAGACCGAAGG ACGATGACGCCGAGGGGACG
Downstream 100 bases:
>100_bases TGGTGGGCACGCAGGCAAACAGCCCGGCCGCAGACACGTACACCACGCTGTGGGACACATCCCGTCCAGATAAGGGTGTG GGTTGAACCGCCATCCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTELGPEREPAVAAPGTGLGAVSTDEELRDAVLALLGTSYDRAVESRTGLSKTTVNDLRNGRRRLTLKTLTLIVETYDPT RRDAWLDAWHRLHPRAVPRVPRPAEPPARPAGPGSRPSVVANPEALDRDEPDDPADCPAPLDRPQRAEGPDPADDPSRAD GPDPAGDPQRVGRPTHAAPASSPAAPGLPWRTVRLLAGAAFVAAVAAVVAAVLVLTGGDSAVNPEPGGGPPPPGPVGAAG LPPYGPGGPGAAAPVGGPGPPPAIGARPAADAETAVPGGCYSLPLPTRADVIDGQGSETTGIRLTAASYSYFAAWNPSAA VGGRLSGPPAAGRRFVGAAWADPATTDSTPAHHPGNGRFYPGEVLELTDQNCFTVQPYNIGYGGYSGITTRIYVLSIGAP DISVLPREAHQRAGLTEDDLERHGVDVLGYFAVPSPAWSGG
Sequences:
>Translated_441_residues MTELGPEREPAVAAPGTGLGAVSTDEELRDAVLALLGTSYDRAVESRTGLSKTTVNDLRNGRRRLTLKTLTLIVETYDPT RRDAWLDAWHRLHPRAVPRVPRPAEPPARPAGPGSRPSVVANPEALDRDEPDDPADCPAPLDRPQRAEGPDPADDPSRAD GPDPAGDPQRVGRPTHAAPASSPAAPGLPWRTVRLLAGAAFVAAVAAVVAAVLVLTGGDSAVNPEPGGGPPPPGPVGAAG LPPYGPGGPGAAAPVGGPGPPPAIGARPAADAETAVPGGCYSLPLPTRADVIDGQGSETTGIRLTAASYSYFAAWNPSAA VGGRLSGPPAAGRRFVGAAWADPATTDSTPAHHPGNGRFYPGEVLELTDQNCFTVQPYNIGYGGYSGITTRIYVLSIGAP DISVLPREAHQRAGLTEDDLERHGVDVLGYFAVPSPAWSGG >Mature_440_residues TELGPEREPAVAAPGTGLGAVSTDEELRDAVLALLGTSYDRAVESRTGLSKTTVNDLRNGRRRLTLKTLTLIVETYDPTR RDAWLDAWHRLHPRAVPRVPRPAEPPARPAGPGSRPSVVANPEALDRDEPDDPADCPAPLDRPQRAEGPDPADDPSRADG PDPAGDPQRVGRPTHAAPASSPAAPGLPWRTVRLLAGAAFVAAVAAVVAAVLVLTGGDSAVNPEPGGGPPPPGPVGAAGL PPYGPGGPGAAAPVGGPGPPPAIGARPAADAETAVPGGCYSLPLPTRADVIDGQGSETTGIRLTAASYSYFAAWNPSAAV GGRLSGPPAAGRRFVGAAWADPATTDSTPAHHPGNGRFYPGEVLELTDQNCFTVQPYNIGYGGYSGITTRIYVLSIGAPD ISVLPREAHQRAGLTEDDLERHGVDVLGYFAVPSPAWSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45152; Mature: 45021
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELGPEREPAVAAPGTGLGAVSTDEELRDAVLALLGTSYDRAVESRTGLSKTTVNDLRN CCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC GRRRLTLKTLTLIVETYDPTRRDAWLDAWHRLHPRAVPRVPRPAEPPARPAGPGSRPSVV CHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE ANPEALDRDEPDDPADCPAPLDRPQRAEGPDPADDPSRADGPDPAGDPQRVGRPTHAAPA ECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC SSPAAPGLPWRTVRLLAGAAFVAAVAAVVAAVLVLTGGDSAVNPEPGGGPPPPGPVGAAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC LPPYGPGGPGAAAPVGGPGPPPAIGARPAADAETAVPGGCYSLPLPTRADVIDGQGSETT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCC GIRLTAASYSYFAAWNPSAAVGGRLSGPPAAGRRFVGAAWADPATTDSTPAHHPGNGRFY CEEEEECCCEEEEECCCCHHCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC PGEVLELTDQNCFTVQPYNIGYGGYSGITTRIYVLSIGAPDISVLPREAHQRAGLTEDDL CCHHEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHCCHHHHHHCCCCHHHH ERHGVDVLGYFAVPSPAWSGG HHCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TELGPEREPAVAAPGTGLGAVSTDEELRDAVLALLGTSYDRAVESRTGLSKTTVNDLRN CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC GRRRLTLKTLTLIVETYDPTRRDAWLDAWHRLHPRAVPRVPRPAEPPARPAGPGSRPSVV CHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE ANPEALDRDEPDDPADCPAPLDRPQRAEGPDPADDPSRADGPDPAGDPQRVGRPTHAAPA ECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC SSPAAPGLPWRTVRLLAGAAFVAAVAAVVAAVLVLTGGDSAVNPEPGGGPPPPGPVGAAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC LPPYGPGGPGAAAPVGGPGPPPAIGARPAADAETAVPGGCYSLPLPTRADVIDGQGSETT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCC GIRLTAASYSYFAAWNPSAAVGGRLSGPPAAGRRFVGAAWADPATTDSTPAHHPGNGRFY CEEEEECCCEEEEECCCCHHCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC PGEVLELTDQNCFTVQPYNIGYGGYSGITTRIYVLSIGAPDISVLPREAHQRAGLTEDDL CCHHEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHCCHHHHHHCCCCHHHH ERHGVDVLGYFAVPSPAWSGG HHCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA