| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318081
Identifier: 158318081
GI number: 158318081
Start: 7702031
End: 7703155
Strand: Direct
Name: 158318081
Synonym: Franean1_6342
Alternate gene names: NA
Gene position: 7702031-7703155 (Clockwise)
Preceding gene: 158318078
Following gene: 158318085
Centisome position: 85.75
GC content: 69.51
Gene sequence:
>1125_bases ATGGATCCGGTGGTCGACGTTGTGCTGGAGCCCGGTCTTCGCTACACGGAGACGATCGAGTCGGGTGCGGGTAACCGGTC CATGCGTTACTGCCGGCTCGTGGCAGACGAGGACACGCCCGTCGGCGAGCTGGAGGTGCATTCCTTCCGGTGGCGGTTCG GTGCCGTGGCCGTCGACGCCGAGGGCATCGGCGGGGTCGAGGTCCAGCCCTCCTTCCGCCGGCGTGGCCACATGAGCCGG CTTCTCCGCCAGGCGCTGGACGGCATGTCACGGCGGGTGAACGTCGCCACGGTTTCCGACGGCATCCAGGGCGTGTACGA GAAGTTCGGCTTCGTCATGTCCGTTGCCGAGGGCCACCTGGACATTCACGTTCGCGACATCGAACGCGCCGCTGCCGCCG CCATGCTGGCCGCTGTACGCGTCCGACCCGGCTCGGCCGAGGACCTACCGGCCATGGTGGATCTCTACAACTCGACGCAC GCCCACCGGCCGTGGACGCACGAACGCCCCGCGGACTGGAACCGTCTGGTACCCCAGACGACATGGCGAGCGGGCTCGGA GATCCTCGTCGTGGAGGCCGGGGGGACGCTCGCGGGATACGCGATCGTGGCGGGCCGGTCGTTCGGCGATAGTTACTTCG GGCTGACTGTCCAGGAGATGGCGGCCCGCGACACGGGCATTGCCCGGTGCCTGCTCGCCGACATTGCCAGGTCCGCATGG GAGTTGCGGGTCAGCGAGTTTCGGGTGCGGGAGCCGTTGGACGGCGTCGTCGGGCGGCTCGCGCGGCACCTGGGCTGTGG GTACAAGCAGGAGTTCCCGCCGACCGGCGGGATGATGGCCGCGATCCTGAACCGATCCGAGCTGCTGGCCACGCTCGAAC CGGAACTTCGACGCCGGGACCGCGATGCCGCCGACGCCGCGATGGACGAACTGGCACGCGGCGAGCTCATCCCCGACAAC GGGCTCCTGGTCCGCCTGCTCCTCGGATACTCCTCGGCCGCTGACGCGTCGACACCTGCGGCGACCATCCCAGCACGCCA CCGGCGAACATGCTCGGCGTGGTTTCCGGGCGGCAGCACCGCGACGCTGCCGATGCCCTACGCGCACGCGCTGGACCGGT ACTGA
Upstream 100 bases:
>100_bases ATACCTCATGCCGATAGATGTACCCACACACCACAAGCCATCACCAGCAGCATTAACCCCGTGCATTAACCATCAGTAGC CGGGGGGAAGAATTCGGGAC
Downstream 100 bases:
>100_bases ATCGCCTCGGCCTCGCACGCGTCTGGCCAACGACGACGACGGCAGGTTGGTGGGCTTCTACGAGTTCGAGCCGCAGGGCG AGGTGCTCGTCTACGGGCTC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MDPVVDVVLEPGLRYTETIESGAGNRSMRYCRLVADEDTPVGELEVHSFRWRFGAVAVDAEGIGGVEVQPSFRRRGHMSR LLRQALDGMSRRVNVATVSDGIQGVYEKFGFVMSVAEGHLDIHVRDIERAAAAAMLAAVRVRPGSAEDLPAMVDLYNSTH AHRPWTHERPADWNRLVPQTTWRAGSEILVVEAGGTLAGYAIVAGRSFGDSYFGLTVQEMAARDTGIARCLLADIARSAW ELRVSEFRVREPLDGVVGRLARHLGCGYKQEFPPTGGMMAAILNRSELLATLEPELRRRDRDAADAAMDELARGELIPDN GLLVRLLLGYSSAADASTPAATIPARHRRTCSAWFPGGSTATLPMPYAHALDRY
Sequences:
>Translated_374_residues MDPVVDVVLEPGLRYTETIESGAGNRSMRYCRLVADEDTPVGELEVHSFRWRFGAVAVDAEGIGGVEVQPSFRRRGHMSR LLRQALDGMSRRVNVATVSDGIQGVYEKFGFVMSVAEGHLDIHVRDIERAAAAAMLAAVRVRPGSAEDLPAMVDLYNSTH AHRPWTHERPADWNRLVPQTTWRAGSEILVVEAGGTLAGYAIVAGRSFGDSYFGLTVQEMAARDTGIARCLLADIARSAW ELRVSEFRVREPLDGVVGRLARHLGCGYKQEFPPTGGMMAAILNRSELLATLEPELRRRDRDAADAAMDELARGELIPDN GLLVRLLLGYSSAADASTPAATIPARHRRTCSAWFPGGSTATLPMPYAHALDRY >Mature_374_residues MDPVVDVVLEPGLRYTETIESGAGNRSMRYCRLVADEDTPVGELEVHSFRWRFGAVAVDAEGIGGVEVQPSFRRRGHMSR LLRQALDGMSRRVNVATVSDGIQGVYEKFGFVMSVAEGHLDIHVRDIERAAAAAMLAAVRVRPGSAEDLPAMVDLYNSTH AHRPWTHERPADWNRLVPQTTWRAGSEILVVEAGGTLAGYAIVAGRSFGDSYFGLTVQEMAARDTGIARCLLADIARSAW ELRVSEFRVREPLDGVVGRLARHLGCGYKQEFPPTGGMMAAILNRSELLATLEPELRRRDRDAADAAMDELARGELIPDN GLLVRLLLGYSSAADASTPAATIPARHRRTCSAWFPGGSTATLPMPYAHALDRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40894; Mature: 40894
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVVDVVLEPGLRYTETIESGAGNRSMRYCRLVADEDTPVGELEVHSFRWRFGAVAVDA CCCHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECEEEEEC EGIGGVEVQPSFRRRGHMSRLLRQALDGMSRRVNVATVSDGIQGVYEKFGFVMSVAEGHL CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCE DIHVRDIERAAAAAMLAAVRVRPGSAEDLPAMVDLYNSTHAHRPWTHERPADWNRLVPQT EEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCH TWRAGSEILVVEAGGTLAGYAIVAGRSFGDSYFGLTVQEMAARDTGIARCLLADIARSAW HHCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELRVSEFRVREPLDGVVGRLARHLGCGYKQEFPPTGGMMAAILNRSELLATLEPELRRRD HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCC RDAADAAMDELARGELIPDNGLLVRLLLGYSSAADASTPAATIPARHRRTCSAWFPGGST CCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCE ATLPMPYAHALDRY EECCCCHHHHHCCC >Mature Secondary Structure MDPVVDVVLEPGLRYTETIESGAGNRSMRYCRLVADEDTPVGELEVHSFRWRFGAVAVDA CCCHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECEEEEEC EGIGGVEVQPSFRRRGHMSRLLRQALDGMSRRVNVATVSDGIQGVYEKFGFVMSVAEGHL CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCE DIHVRDIERAAAAAMLAAVRVRPGSAEDLPAMVDLYNSTHAHRPWTHERPADWNRLVPQT EEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCH TWRAGSEILVVEAGGTLAGYAIVAGRSFGDSYFGLTVQEMAARDTGIARCLLADIARSAW HHCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELRVSEFRVREPLDGVVGRLARHLGCGYKQEFPPTGGMMAAILNRSELLATLEPELRRRD HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCC RDAADAAMDELARGELIPDNGLLVRLLLGYSSAADASTPAATIPARHRRTCSAWFPGGST CCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCE ATLPMPYAHALDRY EECCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA