| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318056
Identifier: 158318056
GI number: 158318056
Start: 7669657
End: 7670205
Strand: Direct
Name: 158318056
Synonym: Franean1_6316
Alternate gene names: NA
Gene position: 7669657-7670205 (Clockwise)
Preceding gene: 158318055
Following gene: 158318057
Centisome position: 85.39
GC content: 54.1
Gene sequence:
>549_bases ATGTACGGCTTTACCCAGCGCTCACCGGGGGTTACAGGGCGGATGAGGTCCGAAATTGGAACCGCAACAAAGAGTCGCTT GACGTTTGCGATTGAAATTGAGAACGATCTAGCGACAGGAAAGACGGTTCAAGATCTCATATTTCACGTGGTTCGCGATC GCCTCGGAATGGCGCAAGAGTTTCTCGGGGTGGCGGACGCTCTGTTAGCTCTTGGTCAACGTCGACGCGAACAGATGCCC CTTAGGTCCGCGGTTAGCAGATATTACTACGCAATGTTTCAGGCCGCCCGCGGCGTTGTTTTTCTGGATCACGGCGGAGA CGACAAAAATGCGCACAGCGAGCTACCAAAATCCCTGCCACAGAAGTTTCCGCGCCGCGCGTACCATCTGAACGAACTAA AGGATGCCCGAGTCAGTCGCAACGATGCCGATTACGACCCATATCCCAACGACGTAGCACATTGGTTGACCGCGGCGAGG TCGCAGAAGAATGCGGCTATAGAATTCATCGATGACTGCACCTCCTACTTGCGAGCGCTAGGAATTTAG
Upstream 100 bases:
>100_bases TGCACCCAGTCCCGATCGCACGATGCTGTGCACAATCGGCCGCCTGATGCCAGCAGCGTCCAACCCCCTGAGCCGTGCGG CCTCGTTCGAACGGTAGGCT
Downstream 100 bases:
>100_bases ATGAGTGACACGTTGACGCGCGACGTCGTTCGCCTATTTGAGCTTCAAAATGTCACTCTCCGCGAAGTTCGGATCAAGAA TTATCCGGACGAGCGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MYGFTQRSPGVTGRMRSEIGTATKSRLTFAIEIENDLATGKTVQDLIFHVVRDRLGMAQEFLGVADALLALGQRRREQMP LRSAVSRYYYAMFQAARGVVFLDHGGDDKNAHSELPKSLPQKFPRRAYHLNELKDARVSRNDADYDPYPNDVAHWLTAAR SQKNAAIEFIDDCTSYLRALGI
Sequences:
>Translated_182_residues MYGFTQRSPGVTGRMRSEIGTATKSRLTFAIEIENDLATGKTVQDLIFHVVRDRLGMAQEFLGVADALLALGQRRREQMP LRSAVSRYYYAMFQAARGVVFLDHGGDDKNAHSELPKSLPQKFPRRAYHLNELKDARVSRNDADYDPYPNDVAHWLTAAR SQKNAAIEFIDDCTSYLRALGI >Mature_182_residues MYGFTQRSPGVTGRMRSEIGTATKSRLTFAIEIENDLATGKTVQDLIFHVVRDRLGMAQEFLGVADALLALGQRRREQMP LRSAVSRYYYAMFQAARGVVFLDHGGDDKNAHSELPKSLPQKFPRRAYHLNELKDARVSRNDADYDPYPNDVAHWLTAAR SQKNAAIEFIDDCTSYLRALGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20540; Mature: 20540
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGFTQRSPGVTGRMRSEIGTATKSRLTFAIEIENDLATGKTVQDLIFHVVRDRLGMAQE CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH FLGVADALLALGQRRREQMPLRSAVSRYYYAMFQAARGVVFLDHGGDDKNAHSELPKSLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH QKFPRRAYHLNELKDARVSRNDADYDPYPNDVAHWLTAARSQKNAAIEFIDDCTSYLRAL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GI CC >Mature Secondary Structure MYGFTQRSPGVTGRMRSEIGTATKSRLTFAIEIENDLATGKTVQDLIFHVVRDRLGMAQE CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH FLGVADALLALGQRRREQMPLRSAVSRYYYAMFQAARGVVFLDHGGDDKNAHSELPKSLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH QKFPRRAYHLNELKDARVSRNDADYDPYPNDVAHWLTAARSQKNAAIEFIDDCTSYLRAL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA