Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318026

Identifier: 158318026

GI number: 158318026

Start: 7634331

End: 7635749

Strand: Reverse

Name: 158318026

Synonym: Franean1_6286

Alternate gene names: NA

Gene position: 7635749-7634331 (Counterclockwise)

Preceding gene: 158318032

Following gene: 158318025

Centisome position: 85.01

GC content: 68.78

Gene sequence:

>1419_bases
GTGTCCCGCCGTGCACAACCCATGACACAGTGCGTGACATGGCTGTGGAAGGGTGAGAACTTCTTCTCAGGGGTGAGACA
CCTATGTCACTGCGGCCAGACGAGGGGGACCGCCGTGCATGATGCCGACACGCTGAAACAGCAGCTTGCGGCACGTTTCA
GGCAGCTCCAGGGCGAGCACGGCCTCTCCGCGGTGCAACTCGAACAACGCACGACGTACGACCGGAAGTACGTCGGGTGG
CTCCGGAATCGTGGTCGTCTTCCAGCACGTCATGTCCTGGTCGCGCTCGACGAGGTGTTCGGGACCGGTCAGGAACTCGC
CGACCTGGGCGACGAGATCCGCGCAGCGCAGAACGACGAACGGTTGCGGCACAAGTCAGGCAAGCTGCGGCAGGAACCGG
TGCTGGACCATGAGGGGGTGGACCCGACGAACCGGCGGGAACTGCTTCAGACTGGTGCGATCTCGGCACTCGCCGGGGTC
GCGGCCGAGCGCAGCGTTGAGGTCGCCAGTGCCGACCTGGCGCCCCCGAAGCTGATCGAAATCGAAGAGGATATTGATCG
GTTCGCGGCCGAATACACCCTGCACCCCCACGAGATCTTGGCCCCGCAGGTGGTCCAGCGCTGGCGGCAGGTAGACGCAG
CTCTCGGCCGCCGCGGGTCCTGGGCGGCCCGGAGGCGGCTCACCGCCGCCGCTGGACGTCTCACCTACTACCTGTCCCGG
CTGGCATTCAACACCGGAGATTTCGGGTCCGCGGTGCGTCTCGCAGCCCTCGCCGATCAGTACGCCGCGCAGGTCGGTGA
CCAGGTCGTGCAGGCGTCGGTCGCCGGGATGACCTCCGGCGTGGCGTTCTACCGGCACCAGTACGACGACGCCACGGCAG
CTTTCACCGCAGCGGATCCGCCGTACCTGCGCGCCCGGAACGCCGCCTACCGGGCGAGGGCCTACGCCGCGACCGGCAAT
GCGGAGCTCGCACAGGCCGAGCTTGACACCATGTGGTCATCACAGCTCGCAGGCACCCCCCAACCGGGAGACCTGCCACT
CAGCATCGCCGGCGCGGAGATGTTCACCGCCGTGGCGCTCGTCCGTCTGGGCGACGGCAAACGCGCCGAGCCCCACGCCC
GGGAGTCCGTTGCAGGGCACGAGGCATCCGGGCCCGCGGCGCACCCCGAAGAGTTCGGCCACGCGCTGTGCATGCTCGCG
AATACGCTTCTTCTGCGCCCCCACCCGGAGCCGGAGGAAGCGGCAGCGCTGGGACGGCGAGCGCTCACCGTCCTGAATGG
CCATCCCACGCACACCGTGGCCGTCCGCGCACGTCTGCTCGGCGAGGATCTCCGCCCGTTCGCGGCGGTGCCCGCTGTCG
CCGAGTTCCGCGAGCTCGCTCATACCGCTGGCCGCCCGGCGCTTACCGGGGCACGGTAG

Upstream 100 bases:

>100_bases
TGGGCCGTGTGGCCGCAGGCAGGCATCCGGCCGGCGGACCCGGGGGCGTCCGGTGGTGTCACGTTCCGCTCCTCTGCAGG
TCCGGGAGAGTGGCCGGCGT

Downstream 100 bases:

>100_bases
GGGAATGCAGCTCGCCGATCCGACGGTCATCGAGATCCCCACCGTCCTGACCTCGCGGCTGGTCCTGCGGGGCTGGCGGG
CCGCGGACGTCGATCCCTAC

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSRRAQPMTQCVTWLWKGENFFSGVRHLCHCGQTRGTAVHDADTLKQQLAARFRQLQGEHGLSAVQLEQRTTYDRKYVGW
LRNRGRLPARHVLVALDEVFGTGQELADLGDEIRAAQNDERLRHKSGKLRQEPVLDHEGVDPTNRRELLQTGAISALAGV
AAERSVEVASADLAPPKLIEIEEDIDRFAAEYTLHPHEILAPQVVQRWRQVDAALGRRGSWAARRRLTAAAGRLTYYLSR
LAFNTGDFGSAVRLAALADQYAAQVGDQVVQASVAGMTSGVAFYRHQYDDATAAFTAADPPYLRARNAAYRARAYAATGN
AELAQAELDTMWSSQLAGTPQPGDLPLSIAGAEMFTAVALVRLGDGKRAEPHARESVAGHEASGPAAHPEEFGHALCMLA
NTLLLRPHPEPEEAAALGRRALTVLNGHPTHTVAVRARLLGEDLRPFAAVPAVAEFRELAHTAGRPALTGAR

Sequences:

>Translated_472_residues
MSRRAQPMTQCVTWLWKGENFFSGVRHLCHCGQTRGTAVHDADTLKQQLAARFRQLQGEHGLSAVQLEQRTTYDRKYVGW
LRNRGRLPARHVLVALDEVFGTGQELADLGDEIRAAQNDERLRHKSGKLRQEPVLDHEGVDPTNRRELLQTGAISALAGV
AAERSVEVASADLAPPKLIEIEEDIDRFAAEYTLHPHEILAPQVVQRWRQVDAALGRRGSWAARRRLTAAAGRLTYYLSR
LAFNTGDFGSAVRLAALADQYAAQVGDQVVQASVAGMTSGVAFYRHQYDDATAAFTAADPPYLRARNAAYRARAYAATGN
AELAQAELDTMWSSQLAGTPQPGDLPLSIAGAEMFTAVALVRLGDGKRAEPHARESVAGHEASGPAAHPEEFGHALCMLA
NTLLLRPHPEPEEAAALGRRALTVLNGHPTHTVAVRARLLGEDLRPFAAVPAVAEFRELAHTAGRPALTGAR
>Mature_471_residues
SRRAQPMTQCVTWLWKGENFFSGVRHLCHCGQTRGTAVHDADTLKQQLAARFRQLQGEHGLSAVQLEQRTTYDRKYVGWL
RNRGRLPARHVLVALDEVFGTGQELADLGDEIRAAQNDERLRHKSGKLRQEPVLDHEGVDPTNRRELLQTGAISALAGVA
AERSVEVASADLAPPKLIEIEEDIDRFAAEYTLHPHEILAPQVVQRWRQVDAALGRRGSWAARRRLTAAAGRLTYYLSRL
AFNTGDFGSAVRLAALADQYAAQVGDQVVQASVAGMTSGVAFYRHQYDDATAAFTAADPPYLRARNAAYRARAYAATGNA
ELAQAELDTMWSSQLAGTPQPGDLPLSIAGAEMFTAVALVRLGDGKRAEPHARESVAGHEASGPAAHPEEFGHALCMLAN
TLLLRPHPEPEEAAALGRRALTVLNGHPTHTVAVRARLLGEDLRPFAAVPAVAEFRELAHTAGRPALTGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51351; Mature: 51220

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SRRAQPMTQCVTWLWKGENFFSGVRHLCHCGQTRGTAVHDADTLKQQLAARFRQLQGEH
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GLSAVQLEQRTTYDRKYVGWLRNRGRLPARHVLVALDEVFGTGQELADLGDEIRAAQNDE
CCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHH
RLRHKSGKLRQEPVLDHEGVDPTNRRELLQTGAISALAGVAAERSVEVASADLAPPKLIE
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE
IEEDIDRFAAEYTLHPHEILAPQVVQRWRQVDAALGRRGSWAARRRLTAAAGRLTYYLSR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAFNTGDFGSAVRLAALADQYAAQVGDQVVQASVAGMTSGVAFYRHQYDDATAAFTAADP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCC
PYLRARNAAYRARAYAATGNAELAQAELDTMWSSQLAGTPQPGDLPLSIAGAEMFTAVAL
CHHHHCCHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHH
VRLGDGKRAEPHARESVAGHEASGPAAHPEEFGHALCMLANTLLLRPHPEPEEAAALGRR
HHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ALTVLNGHPTHTVAVRARLLGEDLRPFAAVPAVAEFRELAHTAGRPALTGAR
HHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA