| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318019
Identifier: 158318019
GI number: 158318019
Start: 7626393
End: 7626890
Strand: Direct
Name: 158318019
Synonym: Franean1_6279
Alternate gene names: NA
Gene position: 7626393-7626890 (Clockwise)
Preceding gene: 158318018
Following gene: 158318020
Centisome position: 84.91
GC content: 73.29
Gene sequence:
>498_bases TTGACTCGCGCGGGCACAATCCACACCGCGTGCATCGCCACCGCGGCGGCCTGCGCTGACCTGGTCGGCTGGGCCGAGCC GCGGGTCCGGCCCCTGCCCGGCCGCCGCGCCGAACAGGGCTGGAGCGTCGACTTGGACGAACTGCACGAGGTCGCCGGCC GGGCGCTGCGCTACGTCACCCAGGTCAACGCCAGGAACTGGCGCTGGCGGCTCCGCGAGATCAGGTTCGCCGTCCTCCGC TACGAGATCGGCCAGCGCATGGCCCGGCATGTCGACCCCAGCCCGCCCGGCATGGTCCGCCGCGCCTCGGTGTCGGTGCA GCTCACCCCGGGAGACGACTACGCCGGTGGCGACCTCACCTTGTGGCCTGATGGCCGGCCGATAGTCGCCAGCCGCGACG TCGGCACCGCCGTCGCGTTCCCGGCCGCAACCGCGCACGAAGTCGGCGAGGTGACCTCGGGTGTCCGCTGGGCGCTCGTC GGGTGGTCCTACTCGTGA
Upstream 100 bases:
>100_bases ACGCGGCCACGCCCGTGCAGATTGCCGCGGCACGGCTCCGCGGCGACCTCGCCGATCTGTTCGACAGCGAGGACGGGCAG CCGGGCGGAGACGAGGCCGC
Downstream 100 bases:
>100_bases CCGTTCCCTGCTACCTTCTGGAGCCCGCCATGCCCACCGATACCGCCGAAGCTGCCCCTGCCGATCTCGTCCCGCGCAGC GAGGTACCGGCGCGCTGGCC
Product: prolyl 4-hydroxylase subunit alpha
Products: NA
Alternate protein names: Prolyl 4-Hydroxylase Alpha Subunit
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTRAGTIHTACIATAAACADLVGWAEPRVRPLPGRRAEQGWSVDLDELHEVAGRALRYVTQVNARNWRWRLREIRFAVLR YEIGQRMARHVDPSPPGMVRRASVSVQLTPGDDYAGGDLTLWPDGRPIVASRDVGTAVAFPAATAHEVGEVTSGVRWALV GWSYS
Sequences:
>Translated_165_residues MTRAGTIHTACIATAAACADLVGWAEPRVRPLPGRRAEQGWSVDLDELHEVAGRALRYVTQVNARNWRWRLREIRFAVLR YEIGQRMARHVDPSPPGMVRRASVSVQLTPGDDYAGGDLTLWPDGRPIVASRDVGTAVAFPAATAHEVGEVTSGVRWALV GWSYS >Mature_164_residues TRAGTIHTACIATAAACADLVGWAEPRVRPLPGRRAEQGWSVDLDELHEVAGRALRYVTQVNARNWRWRLREIRFAVLRY EIGQRMARHVDPSPPGMVRRASVSVQLTPGDDYAGGDLTLWPDGRPIVASRDVGTAVAFPAATAHEVGEVTSGVRWALVG WSYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18115; Mature: 17984
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAGTIHTACIATAAACADLVGWAEPRVRPLPGRRAEQGWSVDLDELHEVAGRALRYVT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QVNARNWRWRLREIRFAVLRYEIGQRMARHVDPSPPGMVRRASVSVQLTPGDDYAGGDLT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCEE LWPDGRPIVASRDVGTAVAFPAATAHEVGEVTSGVRWALVGWSYS ECCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCC >Mature Secondary Structure TRAGTIHTACIATAAACADLVGWAEPRVRPLPGRRAEQGWSVDLDELHEVAGRALRYVT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QVNARNWRWRLREIRFAVLRYEIGQRMARHVDPSPPGMVRRASVSVQLTPGDDYAGGDLT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCEE LWPDGRPIVASRDVGTAVAFPAATAHEVGEVTSGVRWALVGWSYS ECCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA