| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158317953
GI number: 158317953
Start: 7547666
End: 7548700
Strand: Reverse
Name: yajO [H]
Synonym: Franean1_6213
Alternate gene names: 158317953
Gene position: 7548700-7547666 (Counterclockwise)
Preceding gene: 158317954
Following gene: 158317952
Centisome position: 84.04
GC content: 69.28
Gene sequence:
>1035_bases ATGAAATATCGCAGGTTCGGAACGACCGGCGTCGAGGTGAGCAGCCAGTGCCTGGGCACGATGAACTTCGGCCGGCTGGG TAACGTCGATCCCGACGACAGCGTGCGGGTCGTCAGCCGCGCGCTGGACGGTGGGATCAACTTCATCGACACCGCCGACG TGTACTCCCGCGGCGAGAGTGAGCAGATCGTCGGTCGGGCGGTGGGGTCACGCCGGGATGACGTGGTCCTCGCGACCAAG TGCTTCTTCCCCATGGGCGGCCAGCTTCAGCGGGGTTCCTCACGTCGATGGATCATGCAGGCTGTCGAGGGCAGCCTGCG CCGGCTGGGCACCGATCGCATCGACCTGTACCAGATACACAAGCTCGACTGGAACACCGATCTGGAGGAGACCCTCGGTG CCCTGACCGACCTCGTGCGGCAGGGCAAGGTCCTCTACCTGGGCTCGTCGTCGTTCCCGGCGGACTGGATCGTCGAGGCC CAGTGGACGGCGGCCCGGCGCGGCGGTGAACGGTTCGTCTGCGAGCAGCCGCAGTACTCGGTCTTCGCCCGGTCGGTGGA GCAGGCGGTCCTGCCCGCCTGCCAGCGGCATCGGATGGCGGTCATCCCCTGGAGCCCACTCGCCGGCGGCTGGCTGACCG GCAAGTACCAGCGCGGCCAGGAACCGCCGACCGGCTCACGCTACGACCCGGACAGCCCGTTCATGCAGGGAACCGTCAGC TCGGCCGAGGACCGCTCCTCGCCCGCCCGGTTCGACGCCGTCGACGCCCTGCGCGGCGTCGCCGACCAGGCGGGCATCAC CCTGACCGAGCTGGCCATGGCCTTCGTCGCCAACCACCCCGCCATCACCTCGACGATCATCGGGCCGCGCACCATGAAGC ACCTCGAGGACGCGCTGAACGCGGCGGACGTCGACCTCGACGAGGACGTCCTCGACGCGATCGACAAGATCGTGCCCCCC GGCACCGACATGCCCGGGATCGACCACTTCACCCAGCACCCGGCCCTCCTGCCCGCCGCCCGCCGACGCGCATGA
Upstream 100 bases:
>100_bases ACGAGGCGGCGAAGTGGGCTGTCGAGCACGGCAAGGCCGACTACATGTGGAGCAAGCAGGGGGCGGCGCAGCCGGCCGTC GCCAGGGTTGAAGGAGACTC
Downstream 100 bases:
>100_bases AGGCCGTACGCAGGCAAGGCGGGAGAGATCACCGTCGTCGACCTCGACGAGCCACCGGGAGTCGGGGACGAGGTCATCCG GATCGCGGCAGCGAGCATCT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKYRRFGTTGVEVSSQCLGTMNFGRLGNVDPDDSVRVVSRALDGGINFIDTADVYSRGESEQIVGRAVGSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAEDRSSPARFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRA
Sequences:
>Translated_344_residues MKYRRFGTTGVEVSSQCLGTMNFGRLGNVDPDDSVRVVSRALDGGINFIDTADVYSRGESEQIVGRAVGSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAEDRSSPARFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRA >Mature_344_residues MKYRRFGTTGVEVSSQCLGTMNFGRLGNVDPDDSVRVVSRALDGGINFIDTADVYSRGESEQIVGRAVGSRRDDVVLATK CFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIHKLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEA QWTAARRGGERFVCEQPQYSVFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS SAEDRSSPARFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALNAADVDLDEDVLDAIDKIVPP GTDMPGIDHFTQHPALLPAARRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=327, Percent_Identity=32.7217125382263, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=31.5950920245399, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI27436962, Length=327, Percent_Identity=32.4159021406728, Blast_Score=158, Evalue=6e-39, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=31.4814814814815, Blast_Score=158, Evalue=6e-39, Organism=Homo sapiens, GI27436966, Length=327, Percent_Identity=32.1100917431193, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI27436971, Length=310, Percent_Identity=32.258064516129, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI223718702, Length=319, Percent_Identity=29.7805642633229, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI41152114, Length=316, Percent_Identity=29.1139240506329, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI41327764, Length=317, Percent_Identity=29.3375394321767, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI223718708, Length=155, Percent_Identity=36.1290322580645, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081735, Length=328, Percent_Identity=39.6341463414634, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=31.0344827586207, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789375, Length=331, Percent_Identity=28.3987915407855, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1788070, Length=331, Percent_Identity=29.3051359516616, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI1788081, Length=298, Percent_Identity=26.8456375838926, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787674, Length=298, Percent_Identity=24.1610738255034, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=349, Percent_Identity=29.512893982808, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323998, Length=335, Percent_Identity=29.5522388059701, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319958, Length=312, Percent_Identity=28.8461538461538, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6319951, Length=337, Percent_Identity=27.5964391691395, Blast_Score=119, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6322615, Length=264, Percent_Identity=28.7878787878788, Blast_Score=105, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321052, Length=151, Percent_Identity=32.4503311258278, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24640980, Length=335, Percent_Identity=24.7761194029851, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI45549126, Length=335, Percent_Identity=24.7761194029851, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646155, Length=319, Percent_Identity=27.2727272727273, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646159, Length=192, Percent_Identity=29.6875, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37750; Mature: 37750
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRRFGTTGVEVSSQCLGTMNFGRLGNVDPDDSVRVVSRALDGGINFIDTADVYSRGES CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHCCCH EQIVGRAVGSRRDDVVLATKCFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIH HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE KLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEAQWTAARRGGERFVCEQPQYS ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHCCCCCEEECCCCHH VFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC SAEDRSSPARFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALN CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH AADVDLDEDVLDAIDKIVPPGTDMPGIDHFTQHPALLPAARRRA HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCCC >Mature Secondary Structure MKYRRFGTTGVEVSSQCLGTMNFGRLGNVDPDDSVRVVSRALDGGINFIDTADVYSRGES CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHCCCH EQIVGRAVGSRRDDVVLATKCFFPMGGQLQRGSSRRWIMQAVEGSLRRLGTDRIDLYQIH HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE KLDWNTDLEETLGALTDLVRQGKVLYLGSSSFPADWIVEAQWTAARRGGERFVCEQPQYS ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHCCCCCEEECCCCHH VFARSVEQAVLPACQRHRMAVIPWSPLAGGWLTGKYQRGQEPPTGSRYDPDSPFMQGTVS HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC SAEDRSSPARFDAVDALRGVADQAGITLTELAMAFVANHPAITSTIIGPRTMKHLEDALN CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHH AADVDLDEDVLDAIDKIVPPGTDMPGIDHFTQHPALLPAARRRA HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]