| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317940
Identifier: 158317940
GI number: 158317940
Start: 7530725
End: 7531603
Strand: Reverse
Name: 158317940
Synonym: Franean1_6198
Alternate gene names: NA
Gene position: 7531603-7530725 (Counterclockwise)
Preceding gene: 158317943
Following gene: 158317939
Centisome position: 83.85
GC content: 73.95
Gene sequence:
>879_bases ATGCCGTTACGTGACTTCGCCGACCCGGCGGCGGTGGCCGGTGCGCTCGACGCGGCCGGGTACGTGCCGGACGAGGGCGT CGCCACCGCCGCGTTCCTCGCCCTGCGGATGGGCCGGCCGCTGTTCGTGGAGGGCGACCCCGGCGTCGGCAAGACCGCGC TGGCGCACGCACTGGCCACGATCTGCCAGGCCCGCCTGATCCGCCTGCAGTGCTACGAGGGCATCGACGTGAGCCAGGCG CTCTACGACTGGGACTTCCCGCGCCAGGTCCTCCACCTGCGTGCCGCCGCCGGCAGCGCGGACCCGGGCGAGATCGAGGC CTCGCTGTACGACCGCCGCTTCCTGATCGCCCGCCCGGTGCTGCAGGCACTCGAACAGAGCCCCGCCGTCCTGCTCGTCG ACGAGATCGACCGCGCCGACGACGAGTTCGAGGCGTTCCTGCTCGAGGTGCTCGCCGAGGGCTCGGTGACGGTCCCGGAG ATCGGCACGATCCGGGCGGACGTCCCGCCACTGACGGTGATCACCTCGAACCGGACCCGCGAGGTGCACGACGCGCTGAA GCGCCGCTGCCTCTACCTGTGGCTGGACCATCCGGACTTCGCCCGGGAGGTGGAGATCGTCCGGCGGCGGGTGCCGGGCG CGGCGCGCCAGCTCGTCGCGGACGTCGCCCGGGCCACCGCGCGGCTGCGGGAGGCGGGCCTGCTCAAGCCGCCCGGCATC GCCGAGACGATCGACTGGGCGCTGGCCCTGCACACCCTCGGCCGCTCCCGCCTCGACGGGGAGGCGGCGCGGATGACGCT GGGCGCGGTGCTGAAGTACCGGGAGGACATCGTCCGCGCAGAGCGGGAGCTGGGCGAGATCGTCGGCGGGCTGACGTGA
Upstream 100 bases:
>100_bases GGTGCGTGTCCGGTCATGCCGGCCAGTCTGATCCCGTCGGTCAGTCTGGTCCCGCCCGCGTGGCGGGAACCGGGCCGGGG CGGTGGTCATACTCGCCGTC
Downstream 100 bases:
>100_bases ACGCGCGGCCGTCCGCCGCGGGTCCGCTCGCCGAACCGGACCCGCTGGTCGCCCTGACCGGGTTCGCCCGCGCGCTGCGC GGCGCCGGCGCGGCGGCGGA
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; AAA Family ATPase; MoxR-Like ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase Central Domain-Containing Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPLRDFADPAAVAGALDAAGYVPDEGVATAAFLALRMGRPLFVEGDPGVGKTALAHALATICQARLIRLQCYEGIDVSQA LYDWDFPRQVLHLRAAAGSADPGEIEASLYDRRFLIARPVLQALEQSPAVLLVDEIDRADDEFEAFLLEVLAEGSVTVPE IGTIRADVPPLTVITSNRTREVHDALKRRCLYLWLDHPDFAREVEIVRRRVPGAARQLVADVARATARLREAGLLKPPGI AETIDWALALHTLGRSRLDGEAARMTLGAVLKYREDIVRAERELGEIVGGLT
Sequences:
>Translated_292_residues MPLRDFADPAAVAGALDAAGYVPDEGVATAAFLALRMGRPLFVEGDPGVGKTALAHALATICQARLIRLQCYEGIDVSQA LYDWDFPRQVLHLRAAAGSADPGEIEASLYDRRFLIARPVLQALEQSPAVLLVDEIDRADDEFEAFLLEVLAEGSVTVPE IGTIRADVPPLTVITSNRTREVHDALKRRCLYLWLDHPDFAREVEIVRRRVPGAARQLVADVARATARLREAGLLKPPGI AETIDWALALHTLGRSRLDGEAARMTLGAVLKYREDIVRAERELGEIVGGLT >Mature_291_residues PLRDFADPAAVAGALDAAGYVPDEGVATAAFLALRMGRPLFVEGDPGVGKTALAHALATICQARLIRLQCYEGIDVSQAL YDWDFPRQVLHLRAAAGSADPGEIEASLYDRRFLIARPVLQALEQSPAVLLVDEIDRADDEFEAFLLEVLAEGSVTVPEI GTIRADVPPLTVITSNRTREVHDALKRRCLYLWLDHPDFAREVEIVRRRVPGAARQLVADVARATARLREAGLLKPPGIA ETIDWALALHTLGRSRLDGEAARMTLGAVLKYREDIVRAERELGEIVGGLT
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31842; Mature: 31711
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRDFADPAAVAGALDAAGYVPDEGVATAAFLALRMGRPLFVEGDPGVGKTALAHALAT CCCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH ICQARLIRLQCYEGIDVSQALYDWDFPRQVLHLRAAAGSADPGEIEASLYDRRFLIARPV HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LQALEQSPAVLLVDEIDRADDEFEAFLLEVLAEGSVTVPEIGTIRADVPPLTVITSNRTR HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCH EVHDALKRRCLYLWLDHPDFAREVEIVRRRVPGAARQLVADVARATARLREAGLLKPPGI HHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH AETIDWALALHTLGRSRLDGEAARMTLGAVLKYREDIVRAERELGEIVGGLT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLRDFADPAAVAGALDAAGYVPDEGVATAAFLALRMGRPLFVEGDPGVGKTALAHALAT CCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH ICQARLIRLQCYEGIDVSQALYDWDFPRQVLHLRAAAGSADPGEIEASLYDRRFLIARPV HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LQALEQSPAVLLVDEIDRADDEFEAFLLEVLAEGSVTVPEIGTIRADVPPLTVITSNRTR HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCH EVHDALKRRCLYLWLDHPDFAREVEIVRRRVPGAARQLVADVARATARLREAGLLKPPGI HHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH AETIDWALALHTLGRSRLDGEAARMTLGAVLKYREDIVRAERELGEIVGGLT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA