| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317930
Identifier: 158317930
GI number: 158317930
Start: 7517426
End: 7519045
Strand: Reverse
Name: 158317930
Synonym: Franean1_6188
Alternate gene names: NA
Gene position: 7519045-7517426 (Counterclockwise)
Preceding gene: 158317935
Following gene: 158317929
Centisome position: 83.71
GC content: 74.32
Gene sequence:
>1620_bases ATGCTCCGGAATCTTCCATTGGACAGGGTCGTCGGCGGGCCCGTCCCGGCGCGGCGGCGGCCGGCGGGCTGCCACGCTGG TGGCATGGATGCGGTGACGCTGTCGGTGGTGTCCAGTGCGCTGGGCGGCATCGCCGAGGAGATGGGGACGCTGCTCGTCC GGAGCGCGTACTCGTCCAACATCAAGGAGCGGCGCGACTGCTCGGCGGCGATCTTCGACGCGGACGCCCGGATGATCGCT CAGGCCGCCCACGTGCCGGTGCACCTGGGCGCCATGTACGAGTCGGTCCGGGTGGTCGCCGAGCGCGGGCCGCTGCCTGG TGACGTGTGGGTGCTCAACGACCCGTTCTCCGGCGGGAACCACCTGCCCGACGTCACGCTGATCTCCCCGCTCGCGTTTG ACGGCGAGGTGGTCGGCTACGCGGCCACCCGTGCGCACCACTCCGACATGGGCGGGATGCGTCCCGGGTCGATGCCCGCG GACTCCACCGAGATCTTCGCCGAGGGCCTGATCATCCCGCCGGTCCGGCTCGTCCGGGCGGGGCGCTGGGAGGAGGACCT GCTCGACCTCATCTGCGCGAACTCGCGGACGCCCGACCTGCGCCGCGGTGACCTGCGCGCGCAGGCGGCGGCGAACGGGC TGGCCGCCACCCGGCTGGCCGAGCTCGCGCGCCGGCACGGCACCGGGCTCGTCCTGGAGTCGTTCGCCGAGGTACTCCGC TACGGCGAGCGGCGCAGCCGGGCAGTGATCGCGCGGCTGCCCGACGGCGTCCACCGGGTGGAGAGCGAGCTCGAGGGCGA CGGCGTCGACGACCGGGACATAGCGCTGCGGGTCGCGGTGACCATCGAGGGCGACGGCATCACCGTCGACTTCACCGGCA CGTCACCGGCGGTGCGCGGCAACGTCAACTGCCCGCGCGCCGTGACCCGCTCCGCGTGCTGCTTCGCGCTGCGGGTGCTG CTGCCCGACGACGTCCCGACCGGCGACGGCACCTACGCCCCGCTGACCGTGGTGACCGAGCCCGGTTCGCTGGTCGACGC GCAACGCCCGTCCGCCGTCGTGGCGGGCAACGTGGAGACATCGCAGCGCATCGCCGACACGGTGCTGGCGGCCCTGCGGC TGGCGGTCGGCGCCGGGCCGGACGTCCTGGCGGCGCCCGGGCAGGGGACGATGAACAATCTGGTGATCGGCGGCGCGACC TGGACGTACTACGAGACGCTGGGCGGGGGGCAGGGCGCGTCCGCCCGCGGCCGTGGCCCCTCCGGGGTGCACGTGGGGAT GACGAACACGCTGAACACCCCGATCGAGGCGCTCGAGCTGGAGTACCCGATGCGGGTGGAGCGCTACGAGCTGGCCGACG GCACGGGTGGGCCCGGCAGGCATCCGGGCGGGGACGGCCTCGTGCGCTCGGTGCGGGTGCTGGAGCCGGCGACGCTGTCC GTCCTGACCGACCGGCGGCGGCACGCGCCCGGTGGGGTGGCGGGAGGTGGGCCCGGCGCGGTCGGGCACAACGATGTTGA CGGTGTTCCGCTCCCACCGAAGGCGAGCCGGCAGCTCCCTGCCGGGTCGGTCGTCACCCTGCGCACACCGGGCGGTGGCG GATGGGGCCCCCCGCCGTAA
Upstream 100 bases:
>100_bases GTTGGTCTAGATAAACGCAATATAAACTCCAATGGATGGGCAATTCTCCCGTTATCGTTCGGTATGTCATTTTTGTTCCG ATATCTACTGATTAAGGCAA
Downstream 100 bases:
>100_bases TTCTTCGGGATCGACATCATCACGCAGGGTGTACATCTGGCTGTCAATCGTTATCTGGACGGCCACGCGCCCACCTTCGC GCGCGTGTTCGACTGCGGCA
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MLRNLPLDRVVGGPVPARRRPAGCHAGGMDAVTLSVVSSALGGIAEEMGTLLVRSAYSSNIKERRDCSAAIFDADARMIA QAAHVPVHLGAMYESVRVVAERGPLPGDVWVLNDPFSGGNHLPDVTLISPLAFDGEVVGYAATRAHHSDMGGMRPGSMPA DSTEIFAEGLIIPPVRLVRAGRWEEDLLDLICANSRTPDLRRGDLRAQAAANGLAATRLAELARRHGTGLVLESFAEVLR YGERRSRAVIARLPDGVHRVESELEGDGVDDRDIALRVAVTIEGDGITVDFTGTSPAVRGNVNCPRAVTRSACCFALRVL LPDDVPTGDGTYAPLTVVTEPGSLVDAQRPSAVVAGNVETSQRIADTVLAALRLAVGAGPDVLAAPGQGTMNNLVIGGAT WTYYETLGGGQGASARGRGPSGVHVGMTNTLNTPIEALELEYPMRVERYELADGTGGPGRHPGGDGLVRSVRVLEPATLS VLTDRRRHAPGGVAGGGPGAVGHNDVDGVPLPPKASRQLPAGSVVTLRTPGGGGWGPPP
Sequences:
>Translated_539_residues MLRNLPLDRVVGGPVPARRRPAGCHAGGMDAVTLSVVSSALGGIAEEMGTLLVRSAYSSNIKERRDCSAAIFDADARMIA QAAHVPVHLGAMYESVRVVAERGPLPGDVWVLNDPFSGGNHLPDVTLISPLAFDGEVVGYAATRAHHSDMGGMRPGSMPA DSTEIFAEGLIIPPVRLVRAGRWEEDLLDLICANSRTPDLRRGDLRAQAAANGLAATRLAELARRHGTGLVLESFAEVLR YGERRSRAVIARLPDGVHRVESELEGDGVDDRDIALRVAVTIEGDGITVDFTGTSPAVRGNVNCPRAVTRSACCFALRVL LPDDVPTGDGTYAPLTVVTEPGSLVDAQRPSAVVAGNVETSQRIADTVLAALRLAVGAGPDVLAAPGQGTMNNLVIGGAT WTYYETLGGGQGASARGRGPSGVHVGMTNTLNTPIEALELEYPMRVERYELADGTGGPGRHPGGDGLVRSVRVLEPATLS VLTDRRRHAPGGVAGGGPGAVGHNDVDGVPLPPKASRQLPAGSVVTLRTPGGGGWGPPP >Mature_539_residues MLRNLPLDRVVGGPVPARRRPAGCHAGGMDAVTLSVVSSALGGIAEEMGTLLVRSAYSSNIKERRDCSAAIFDADARMIA QAAHVPVHLGAMYESVRVVAERGPLPGDVWVLNDPFSGGNHLPDVTLISPLAFDGEVVGYAATRAHHSDMGGMRPGSMPA DSTEIFAEGLIIPPVRLVRAGRWEEDLLDLICANSRTPDLRRGDLRAQAAANGLAATRLAELARRHGTGLVLESFAEVLR YGERRSRAVIARLPDGVHRVESELEGDGVDDRDIALRVAVTIEGDGITVDFTGTSPAVRGNVNCPRAVTRSACCFALRVL LPDDVPTGDGTYAPLTVVTEPGSLVDAQRPSAVVAGNVETSQRIADTVLAALRLAVGAGPDVLAAPGQGTMNNLVIGGAT WTYYETLGGGQGASARGRGPSGVHVGMTNTLNTPIEALELEYPMRVERYELADGTGGPGRHPGGDGLVRSVRVLEPATLS VLTDRRRHAPGGVAGGGPGAVGHNDVDGVPLPPKASRQLPAGSVVTLRTPGGGGWGPPP
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=536, Percent_Identity=41.2313432835821, Blast_Score=317, Evalue=2e-86, Organism=Caenorhabditis elegans, GI133901900, Length=534, Percent_Identity=38.2022471910112, Blast_Score=321, Evalue=6e-88, Organism=Caenorhabditis elegans, GI133901902, Length=514, Percent_Identity=36.9649805447471, Blast_Score=293, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6322634, Length=548, Percent_Identity=35.5839416058394, Blast_Score=311, Evalue=2e-85, Organism=Drosophila melanogaster, GI45550492, Length=536, Percent_Identity=40.4850746268657, Blast_Score=322, Evalue=3e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 56030; Mature: 56030
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNLPLDRVVGGPVPARRRPAGCHAGGMDAVTLSVVSSALGGIAEEMGTLLVRSAYSSN CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IKERRDCSAAIFDADARMIAQAAHVPVHLGAMYESVRVVAERGPLPGDVWVLNDPFSGGN HHHHHCCCCEEECCHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC HLPDVTLISPLAFDGEVVGYAATRAHHSDMGGMRPGSMPADSTEIFAEGLIIPPVRLVRA CCCCEEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHC GRWEEDLLDLICANSRTPDLRRGDLRAQAAANGLAATRLAELARRHGTGLVLESFAEVLR CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH YGERRSRAVIARLPDGVHRVESELEGDGVDDRDIALRVAVTIEGDGITVDFTGTSPAVRG HCCHHCCEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEC NVNCPRAVTRSACCFALRVLLPDDVPTGDGTYAPLTVVTEPGSLVDAQRPSAVVAGNVET CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHH SQRIADTVLAALRLAVGAGPDVLAAPGQGTMNNLVIGGATWTYYETLGGGQGASARGRGP HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCCEEEEHHHCCCCCCCCCCCCCC SGVHVGMTNTLNTPIEALELEYPMRVERYELADGTGGPGRHPGGDGLVRSVRVLEPATLS CCEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH VLTDRRRHAPGGVAGGGPGAVGHNDVDGVPLPPKASRQLPAGSVVTLRTPGGGGWGPPP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MLRNLPLDRVVGGPVPARRRPAGCHAGGMDAVTLSVVSSALGGIAEEMGTLLVRSAYSSN CCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IKERRDCSAAIFDADARMIAQAAHVPVHLGAMYESVRVVAERGPLPGDVWVLNDPFSGGN HHHHHCCCCEEECCHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC HLPDVTLISPLAFDGEVVGYAATRAHHSDMGGMRPGSMPADSTEIFAEGLIIPPVRLVRA CCCCEEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHC GRWEEDLLDLICANSRTPDLRRGDLRAQAAANGLAATRLAELARRHGTGLVLESFAEVLR CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH YGERRSRAVIARLPDGVHRVESELEGDGVDDRDIALRVAVTIEGDGITVDFTGTSPAVRG HCCHHCCEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEC NVNCPRAVTRSACCFALRVLLPDDVPTGDGTYAPLTVVTEPGSLVDAQRPSAVVAGNVET CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHH SQRIADTVLAALRLAVGAGPDVLAAPGQGTMNNLVIGGATWTYYETLGGGQGASARGRGP HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCCEEEEHHHCCCCCCCCCCCCCC SGVHVGMTNTLNTPIEALELEYPMRVERYELADGTGGPGRHPGGDGLVRSVRVLEPATLS CCEEEEECCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH VLTDRRRHAPGGVAGGGPGAVGHNDVDGVPLPPKASRQLPAGSVVTLRTPGGGGWGPPP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]