Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317922

Identifier: 158317922

GI number: 158317922

Start: 7509717

End: 7510175

Strand: Reverse

Name: 158317922

Synonym: Franean1_6180

Alternate gene names: NA

Gene position: 7510175-7509717 (Counterclockwise)

Preceding gene: 158317923

Following gene: 158317920

Centisome position: 83.61

GC content: 69.5

Gene sequence:

>459_bases
GTGGACACGAAGAGTGCCCCAATATGCCCGATCGAACCGGTGGCGATGGGGCTGCCGGCGGACAGCGGAGGGAACGGCGA
CGAGATGATCACGGAGGAGGGCAGCTGCGGTGCCTGGCAGCGCGTGCCCGAAGAGATAGCGATGCGGCTCGACGATGTGC
CAGGAGCCGCGTACGAGGTGCCCAGCGAGGTGACCTGCGCGCTTCAGCAGGGCCACCCGGACAACCACATGGCGGTACTG
CAGGGATGGGGGAACGAGGAGGTCTGGCTGTCGTGGTCCGCCCCGAGGACCATCACGGCCCCCGGGTGTCGCGCCGAGGG
GATGACCTGCCTGCTTCCGACCGGCCATCAGGGCCACCACTATGTGATCATGGCTGACGTGGTGGAGGACGAGGGCCCGT
ACTGGGTCGCCGACCGCGCCGATCTGGACACGCGGCGGGCCGGCGTCCCCGGGGGCTGA

Upstream 100 bases:

>100_bases
TGAAAGGCGCGCGGACCCATGAACGGGATGTTTCCGCCCTGCTGGGAGACCTCGAGACGGTCCGTGCTTATATCGGTGCG
TCGATCGCGCTTGTGGCGAT

Downstream 100 bases:

>100_bases
CCGACCTGGCCGTTCTCCGCTGGCAGGCAGCGGCCCGGCGTCGGTGTCCCGCCCTGGGCACCTACGGTTTCAGGGCCGCT
GCCGGTACGGGCCGAAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDTKSAPICPIEPVAMGLPADSGGNGDEMITEEGSCGAWQRVPEEIAMRLDDVPGAAYEVPSEVTCALQQGHPDNHMAVL
QGWGNEEVWLSWSAPRTITAPGCRAEGMTCLLPTGHQGHHYVIMADVVEDEGPYWVADRADLDTRRAGVPGG

Sequences:

>Translated_152_residues
MDTKSAPICPIEPVAMGLPADSGGNGDEMITEEGSCGAWQRVPEEIAMRLDDVPGAAYEVPSEVTCALQQGHPDNHMAVL
QGWGNEEVWLSWSAPRTITAPGCRAEGMTCLLPTGHQGHHYVIMADVVEDEGPYWVADRADLDTRRAGVPGG
>Mature_152_residues
MDTKSAPICPIEPVAMGLPADSGGNGDEMITEEGSCGAWQRVPEEIAMRLDDVPGAAYEVPSEVTCALQQGHPDNHMAVL
QGWGNEEVWLSWSAPRTITAPGCRAEGMTCLLPTGHQGHHYVIMADVVEDEGPYWVADRADLDTRRAGVPGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16239; Mature: 16239

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKSAPICPIEPVAMGLPADSGGNGDEMITEEGSCGAWQRVPEEIAMRLDDVPGAAYEV
CCCCCCCCCCCCHHEECCCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHCCCCCCCEEC
PSEVTCALQQGHPDNHMAVLQGWGNEEVWLSWSAPRTITAPGCRAEGMTCLLPTGHQGHH
CCHHEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCE
YVIMADVVEDEGPYWVADRADLDTRRAGVPGG
EEEEEEEECCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTKSAPICPIEPVAMGLPADSGGNGDEMITEEGSCGAWQRVPEEIAMRLDDVPGAAYEV
CCCCCCCCCCCCHHEECCCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHCCCCCCCEEC
PSEVTCALQQGHPDNHMAVLQGWGNEEVWLSWSAPRTITAPGCRAEGMTCLLPTGHQGHH
CCHHEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCE
YVIMADVVEDEGPYWVADRADLDTRRAGVPGG
EEEEEEEECCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA