| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317913
Identifier: 158317913
GI number: 158317913
Start: 7501579
End: 7502199
Strand: Reverse
Name: 158317913
Synonym: Franean1_6171
Alternate gene names: NA
Gene position: 7502199-7501579 (Counterclockwise)
Preceding gene: 158317914
Following gene: 158317912
Centisome position: 83.52
GC content: 75.52
Gene sequence:
>621_bases GTGACCAGGGCGCGGGACGGCCGGTTCCGGGTGTCCCGGGTGCGCGGTGGTCCCCGGGGCGCCGGCGCGCGCCGCGGTGA CCAGCACGGAGGTGGTGAACGTGAGGGTCGTGGGGACGCGGGTCTGGCGGTGGTGACCGGTGTCGGTGCGGTGCCGGGCC CTGATCCGGGCGATCACCGCCCCGAGGCGCCTGGTGAGACGGCGCCTGGCGAGACGGCGCGGGGTGGGCGGGGTGGGCGG GGTGGTCTGACGGCGGAGCTTGCGGCGCTGGGGCACGTGCCCGGCGAGGTCGCGACCCTGCTGCAGTTCTCGACGGCGTT CTGCGCCCCCTGCCGGGTCGCCCGGCGGATGCTCGCCGACGTCGCCGCGATCGTGCCGGGGGTGCGCCATGTCGAGGTGG ACGCCGAGTCACACCTGGAGCTGGTGCGCAGGCTGGGTGTGCGCCGGACGCCGACGGTGCTCGTCCTCGACGCCGAGGGT GTCGAGGCGCGCAGGGCGAGCGGTGCGCCGCCGACCCGGGACGCCGTCCTGGCGACCCTCGCGTCGCTCGTCGAGCCGGC GCCCGGAGACCATCGGAAGGGTACTGATGGTGATTCGGTGGGTCTGTCGGGTAACGCTTAA
Upstream 100 bases:
>100_bases CGGAGGTGGGAAGGTTTCGTCGTCCTGAGGCGCTGCACCCGCCATGACCGGCGTGTGGGTCCTGCTGGCGGCACTTGTAG CGGCGACCGGGGTCGGCCTG
Downstream 100 bases:
>100_bases CACAGACGTGACGTTCGCTGCTACCGTGATACGAACCATGTGCAGCACTGAGCTGGTCAAGCGCCGCGCGGTCGACCTGT GCCGCGTGAGCAGCTGCTTG
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; ThiX Family Protein; Thioredoxin Domain Protein; Thioredoxin-Related
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTRARDGRFRVSRVRGGPRGAGARRGDQHGGGEREGRGDAGLAVVTGVGAVPGPDPGDHRPEAPGETAPGETARGGRGGR GGLTAELAALGHVPGEVATLLQFSTAFCAPCRVARRMLADVAAIVPGVRHVEVDAESHLELVRRLGVRRTPTVLVLDAEG VEARRASGAPPTRDAVLATLASLVEPAPGDHRKGTDGDSVGLSGNA
Sequences:
>Translated_206_residues MTRARDGRFRVSRVRGGPRGAGARRGDQHGGGEREGRGDAGLAVVTGVGAVPGPDPGDHRPEAPGETAPGETARGGRGGR GGLTAELAALGHVPGEVATLLQFSTAFCAPCRVARRMLADVAAIVPGVRHVEVDAESHLELVRRLGVRRTPTVLVLDAEG VEARRASGAPPTRDAVLATLASLVEPAPGDHRKGTDGDSVGLSGNA >Mature_205_residues TRARDGRFRVSRVRGGPRGAGARRGDQHGGGEREGRGDAGLAVVTGVGAVPGPDPGDHRPEAPGETAPGETARGGRGGRG GLTAELAALGHVPGEVATLLQFSTAFCAPCRVARRMLADVAAIVPGVRHVEVDAESHLELVRRLGVRRTPTVLVLDAEGV EARRASGAPPTRDAVLATLASLVEPAPGDHRKGTDGDSVGLSGNA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20969; Mature: 20838
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRARDGRFRVSRVRGGPRGAGARRGDQHGGGEREGRGDAGLAVVTGVGAVPGPDPGDHR CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC PEAPGETAPGETARGGRGGRGGLTAELAALGHVPGEVATLLQFSTAFCAPCRVARRMLAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAAIVPGVRHVEVDAESHLELVRRLGVRRTPTVLVLDAEGVEARRASGAPPTRDAVLATL HHHHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHH ASLVEPAPGDHRKGTDGDSVGLSGNA HHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRARDGRFRVSRVRGGPRGAGARRGDQHGGGEREGRGDAGLAVVTGVGAVPGPDPGDHR CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC PEAPGETAPGETARGGRGGRGGLTAELAALGHVPGEVATLLQFSTAFCAPCRVARRMLAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAAIVPGVRHVEVDAESHLELVRRLGVRRTPTVLVLDAEGVEARRASGAPPTRDAVLATL HHHHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHH ASLVEPAPGDHRKGTDGDSVGLSGNA HHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA