| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cysA [H]
Identifier: 158317911
GI number: 158317911
Start: 7500121
End: 7500954
Strand: Reverse
Name: cysA [H]
Synonym: Franean1_6169
Alternate gene names: 158317911
Gene position: 7500954-7500121 (Counterclockwise)
Preceding gene: 158317912
Following gene: 158317910
Centisome position: 83.51
GC content: 67.15
Gene sequence:
>834_bases ATGAGCCGTGAGAACGCGCTGGTCGACGCGACCTGGGTGGACGCCCACAGCGGCGACCCCAAGGTCGTCCTCGTCGAGGT CGACGAGGACGTGTCGGCCTACGACAAGGGCCACATCCCCGGCGCAGTGCGGCTTGACTGGAAGTCCGAACTGCAGGACC CGGTGATCCGTGACTTCGTGAACAAGGAGCAGTTCGAGAAGCTCCTGTCGGAGAAGGGCATCGCCGACGATGACACCGTG GTGCTCTACGGCGGCAACAACAACTGGTTCGCCGCCTACGCCTACTGGTACTTCGTCCTCTACGGCCACGCCGAGGTCCG CCTGCTCGACGGCGGCCGCAAGAAGTGGGAGCTGGACGGCCGTGAGCTGACCATCGAGGTCACCCCGCGCGCGGCGACCA AGTACTCCGCCTCGGAGGCGCGTACCGACATCCGCGCGTTCCGTGACGAGGTCATCACCGCCATCGGTGACAAGAACCTG GTGGACGTCCGCTCGCCCGACGAGTTCAGCGGCCGCCTGCTCGCCCCGGCGCACCTGCCGCAGGAGCAGTCGCAGCGGGC CGGCCACGTGCCGACCGCGAAGAACATCCCGTGGGCGAGGACCGCCAACGAGGACGGCACCTTCAAGTCGAACGCCGACC TGGAGAAGCTGTACTCCGAGGCCGGTGTCGACCTGTCGAAGGACACCATCGCCTACTGCCGGATCGGGGAGCGCTCCGCG CACACCTGGTTCGCCCTGCACGAGCTGCTGGGCCTGGCGAACGTCAAGAACTACGACGGCTCGTGGACCGAGTACGGCTC CCTGGTGGGCGTGCCGATCGAGAAGGGTGCCTGA
Upstream 100 bases:
>100_bases TCGCCTTCGCCGCGGCCTTCCTGAACGCGGCGTTCGGATTCTGCCTCGGATGCCAGACCTACCTCGTCCTACGTTCCGCA ACTGTGAAGGGAGCACGCAC
Downstream 100 bases:
>100_bases TCATGTGTGGCGCTACCAGTGGTGGACCCTCGGTGGAAGGAATCGACGTGGCCAAGGAGACCGTGATCCAGGGCGTCGTG GTGAAGGACGGGTCGCCGGT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese-like protein [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSRENALVDATWVDAHSGDPKVVLVEVDEDVSAYDKGHIPGAVRLDWKSELQDPVIRDFVNKEQFEKLLSEKGIADDDTV VLYGGNNNWFAAYAYWYFVLYGHAEVRLLDGGRKKWELDGRELTIEVTPRAATKYSASEARTDIRAFRDEVITAIGDKNL VDVRSPDEFSGRLLAPAHLPQEQSQRAGHVPTAKNIPWARTANEDGTFKSNADLEKLYSEAGVDLSKDTIAYCRIGERSA HTWFALHELLGLANVKNYDGSWTEYGSLVGVPIEKGA
Sequences:
>Translated_277_residues MSRENALVDATWVDAHSGDPKVVLVEVDEDVSAYDKGHIPGAVRLDWKSELQDPVIRDFVNKEQFEKLLSEKGIADDDTV VLYGGNNNWFAAYAYWYFVLYGHAEVRLLDGGRKKWELDGRELTIEVTPRAATKYSASEARTDIRAFRDEVITAIGDKNL VDVRSPDEFSGRLLAPAHLPQEQSQRAGHVPTAKNIPWARTANEDGTFKSNADLEKLYSEAGVDLSKDTIAYCRIGERSA HTWFALHELLGLANVKNYDGSWTEYGSLVGVPIEKGA >Mature_276_residues SRENALVDATWVDAHSGDPKVVLVEVDEDVSAYDKGHIPGAVRLDWKSELQDPVIRDFVNKEQFEKLLSEKGIADDDTVV LYGGNNNWFAAYAYWYFVLYGHAEVRLLDGGRKKWELDGRELTIEVTPRAATKYSASEARTDIRAFRDEVITAIGDKNLV DVRSPDEFSGRLLAPAHLPQEQSQRAGHVPTAKNIPWARTANEDGTFKSNADLEKLYSEAGVDLSKDTIAYCRIGERSAH TWFALHELLGLANVKNYDGSWTEYGSLVGVPIEKGA
Specific function: May be a sulfotransferase involved in the formation of thiosulfate [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=239, Percent_Identity=30.5439330543933, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI194473668, Length=278, Percent_Identity=27.3381294964029, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI61835204, Length=278, Percent_Identity=27.3381294964029, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI194473681, Length=278, Percent_Identity=27.3381294964029, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI87082121, Length=288, Percent_Identity=28.125, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI87081967, Length=275, Percent_Identity=28.3636363636364, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17561888, Length=274, Percent_Identity=27.3722627737226, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71997283, Length=278, Percent_Identity=27.6978417266187, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534702, Length=247, Percent_Identity=29.5546558704453, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17559150, Length=267, Percent_Identity=24.3445692883895, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324825, Length=280, Percent_Identity=27.5, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 30902; Mature: 30770
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRENALVDATWVDAHSGDPKVVLVEVDEDVSAYDKGHIPGAVRLDWKSELQDPVIRDFV CCCCCEEEEEEEEECCCCCCEEEEEEECCCCCHHCCCCCCCEEEECCHHHHCCHHHHHHC NKEQFEKLLSEKGIADDDTVVLYGGNNNWFAAYAYWYFVLYGHAEVRLLDGGRKKWELDG CHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHHEEEEHEECCCEEEEECCCCEEEEECC RELTIEVTPRAATKYSASEARTDIRAFRDEVITAIGDKNLVDVRSPDEFSGRLLAPAHLP CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCCCCC QEQSQRAGHVPTAKNIPWARTANEDGTFKSNADLEKLYSEAGVDLSKDTIAYCRIGERSA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC HTWFALHELLGLANVKNYDGSWTEYGSLVGVPIEKGA HHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCC >Mature Secondary Structure SRENALVDATWVDAHSGDPKVVLVEVDEDVSAYDKGHIPGAVRLDWKSELQDPVIRDFV CCCCEEEEEEEEECCCCCCEEEEEEECCCCCHHCCCCCCCEEEECCHHHHCCHHHHHHC NKEQFEKLLSEKGIADDDTVVLYGGNNNWFAAYAYWYFVLYGHAEVRLLDGGRKKWELDG CHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHHEEEEHEECCCEEEEECCCCEEEEECC RELTIEVTPRAATKYSASEARTDIRAFRDEVITAIGDKNLVDVRSPDEFSGRLLAPAHLP CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCCCCC QEQSQRAGHVPTAKNIPWARTANEDGTFKSNADLEKLYSEAGVDLSKDTIAYCRIGERSA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC HTWFALHELLGLANVKNYDGSWTEYGSLVGVPIEKGA HHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2294090 [H]