Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317907

Identifier: 158317907

GI number: 158317907

Start: 7498669

End: 7498827

Strand: Reverse

Name: 158317907

Synonym: Franean1_6165

Alternate gene names: NA

Gene position: 7498827-7498669 (Counterclockwise)

Preceding gene: 158317910

Following gene: 158317906

Centisome position: 83.49

GC content: 66.04

Gene sequence:

>159_bases
GTGCGGTACGGGGCAGGCGTTACGGAACGCGTCGGGGCACGGCCTAGGCTGTGGTCCGTGCTGCACTACTTCATGAGCGG
CCTGCTGGTGGCCATGGCGATGCTGATCGCCTGGTTCTCCGGCTACGCCGTCTACAAGCTGTACGGAGGCCAGCGCTGA

Upstream 100 bases:

>100_bases
CAGCGAACGGGTCACCCGTCCAGTGTGCCGTGCCGGGCCGCCGCGGGCCGGCGGCTGGTAGCTGGTAGCTGGTGGCTGGT
GGCGGACACGCACCGGCCAG

Downstream 100 bases:

>100_bases
GCGGCCGGGCGAGAGGTGGCAGGCAGATGGGGGCGGACGCGACCGGCGACACGGCGGCACGCGGCGACAGAGCGGCACAC
GGCGACACCGCGAGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MRYGAGVTERVGARPRLWSVLHYFMSGLLVAMAMLIAWFSGYAVYKLYGGQR

Sequences:

>Translated_52_residues
MRYGAGVTERVGARPRLWSVLHYFMSGLLVAMAMLIAWFSGYAVYKLYGGQR
>Mature_52_residues
MRYGAGVTERVGARPRLWSVLHYFMSGLLVAMAMLIAWFSGYAVYKLYGGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5902; Mature: 5902

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGAGVTERVGARPRLWSVLHYFMSGLLVAMAMLIAWFSGYAVYKLYGGQR
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
>Mature Secondary Structure
MRYGAGVTERVGARPRLWSVLHYFMSGLLVAMAMLIAWFSGYAVYKLYGGQR
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA