Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317880

Identifier: 158317880

GI number: 158317880

Start: 7468145

End: 7469059

Strand: Reverse

Name: 158317880

Synonym: Franean1_6138

Alternate gene names: NA

Gene position: 7469059-7468145 (Counterclockwise)

Preceding gene: 158317881

Following gene: 158317879

Centisome position: 83.16

GC content: 73.01

Gene sequence:

>915_bases
ATGGCAGGCTGGTTGCACGGTCGGCAACGACGCCGTCCGGGCGCAGGGGGTCACATGGGCAGCGCGTGGATCACATTCAT
GTCCGACTACGGAGTTGACGGCGCCTGCGTCGGCGTCTGTCACGGGATCATCGCCCGGCACGCGCCGGACGCCCGGGTCA
TCGACCTGTGCCACTCGATCGCGCCGCAGGACATCGGCCAGGCGGCCGTGACGCTGGTCGGCGCGGTCGGCTACCTGCCG
AGGGGAATCCACCTCGTGGTCGTCGAGCAGCTCGACGCCAGCGGCTACACCCGCGGTGTCGTCGCCCGCGCCGCGGACGG
ATCGACGTTCGTCGCCCCGGACAACGGCGTCGCCTCGCTGGGCTGGGAGGCCCTGGGCGGCGTCGAGGAGGCCTACGAGA
TCTCCAACCCGGACCTCTGGCTCCCGCTGCCCACCGCCGTCTTCCGCGGCCGTGACGTCTACGCGCCGGTCGTGGCGCGG
CTCGCGACGGGCCTGCCTCCGGCTGACGTCGGCCCCAGGATCGACCCGGGGGAGCTGGTCGTCGTGGAGCCACGGGTGTG
CCACGTGGACGACGACCACGTCCACGGCGAGGTGGTCTCGGTGGACCACTTCGGGAACCTCTCGTTGAACATGACCAGGG
CCGAGCTCGAGGCCGCCGGCATCCTGCTCGGGGACAGGGTGGAGGTGCGCGCCGACGGTCGGCTGCTCACCATGCCCTTC
GCGCACACCTACGGCGAGGTCCCGCCCGGCGAGATCGCGCTCTGCGAGGACGCGCTGCGCCAGGTCATGATCGCGGTGAA
CTGCGGCCGGGCGGCCGAGGTGCTGCGCCTGCGGCGCGGCGACGCCGTCGTCGTCGCCCAGGTCCCCCGGGACGGCGCCC
GGATCCCGGTGAGCGCGGTGCGTGGGCTCGCCTGA

Upstream 100 bases:

>100_bases
CCGCTCACGTCGGCCCGCTGCGGCCGCTGTCCCGGCCCGGGCGGCCGAGTAACAGACCTGTTTCGCGCTGTGTGCTCGTC
CATGCGGTTCTGGTGACCGT

Downstream 100 bases:

>100_bases
CGCCGGAGCGTGGTGCGCGAGCGGGTCTGACACGACTGGCATCCCGTGTCGTGCGTCGCCCGACCGCAGTCTTGCTACTC
TCCGTAGCCGTTCATGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MAGWLHGRQRRRPGAGGHMGSAWITFMSDYGVDGACVGVCHGIIARHAPDARVIDLCHSIAPQDIGQAAVTLVGAVGYLP
RGIHLVVVEQLDASGYTRGVVARAADGSTFVAPDNGVASLGWEALGGVEEAYEISNPDLWLPLPTAVFRGRDVYAPVVAR
LATGLPPADVGPRIDPGELVVVEPRVCHVDDDHVHGEVVSVDHFGNLSLNMTRAELEAAGILLGDRVEVRADGRLLTMPF
AHTYGEVPPGEIALCEDALRQVMIAVNCGRAAEVLRLRRGDAVVVAQVPRDGARIPVSAVRGLA

Sequences:

>Translated_304_residues
MAGWLHGRQRRRPGAGGHMGSAWITFMSDYGVDGACVGVCHGIIARHAPDARVIDLCHSIAPQDIGQAAVTLVGAVGYLP
RGIHLVVVEQLDASGYTRGVVARAADGSTFVAPDNGVASLGWEALGGVEEAYEISNPDLWLPLPTAVFRGRDVYAPVVAR
LATGLPPADVGPRIDPGELVVVEPRVCHVDDDHVHGEVVSVDHFGNLSLNMTRAELEAAGILLGDRVEVRADGRLLTMPF
AHTYGEVPPGEIALCEDALRQVMIAVNCGRAAEVLRLRRGDAVVVAQVPRDGARIPVSAVRGLA
>Mature_303_residues
AGWLHGRQRRRPGAGGHMGSAWITFMSDYGVDGACVGVCHGIIARHAPDARVIDLCHSIAPQDIGQAAVTLVGAVGYLPR
GIHLVVVEQLDASGYTRGVVARAADGSTFVAPDNGVASLGWEALGGVEEAYEISNPDLWLPLPTAVFRGRDVYAPVVARL
ATGLPPADVGPRIDPGELVVVEPRVCHVDDDHVHGEVVSVDHFGNLSLNMTRAELEAAGILLGDRVEVRADGRLLTMPFA
HTYGEVPPGEIALCEDALRQVMIAVNCGRAAEVLRLRRGDAVVVAQVPRDGARIPVSAVRGLA

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 32076; Mature: 31945

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWLHGRQRRRPGAGGHMGSAWITFMSDYGVDGACVGVCHGIIARHAPDARVIDLCHSI
CCCCCCCHHHCCCCCCCCCCHHHEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
APQDIGQAAVTLVGAVGYLPRGIHLVVVEQLDASGYTRGVVARAADGSTFVAPDNGVASL
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCHHC
GWEALGGVEEAYEISNPDLWLPLPTAVFRGRDVYAPVVARLATGLPPADVGPRIDPGELV
CHHHHCCHHHHHCCCCCCEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEE
VVEPRVCHVDDDHVHGEVVSVDHFGNLSLNMTRAELEAAGILLGDRVEVRADGRLLTMPF
EECCEEEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHHCEEECCEEEEEECCEEEEECH
AHTYGEVPPGEIALCEDALRQVMIAVNCGRAAEVLRLRRGDAVVVAQVPRDGARIPVSAV
HHHCCCCCCCCCHHHHHHHHHHEEHCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
RGLA
CCCC
>Mature Secondary Structure 
AGWLHGRQRRRPGAGGHMGSAWITFMSDYGVDGACVGVCHGIIARHAPDARVIDLCHSI
CCCCCCHHHCCCCCCCCCCHHHEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
APQDIGQAAVTLVGAVGYLPRGIHLVVVEQLDASGYTRGVVARAADGSTFVAPDNGVASL
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCHHC
GWEALGGVEEAYEISNPDLWLPLPTAVFRGRDVYAPVVARLATGLPPADVGPRIDPGELV
CHHHHCCHHHHHCCCCCCEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEE
VVEPRVCHVDDDHVHGEVVSVDHFGNLSLNMTRAELEAAGILLGDRVEVRADGRLLTMPF
EECCEEEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHHCEEECCEEEEEECCEEEEECH
AHTYGEVPPGEIALCEDALRQVMIAVNCGRAAEVLRLRRGDAVVVAQVPRDGARIPVSAV
HHHCCCCCCCCCHHHHHHHHHHEEHCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
RGLA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]