| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317878
Identifier: 158317878
GI number: 158317878
Start: 7465521
End: 7466345
Strand: Reverse
Name: 158317878
Synonym: Franean1_6136
Alternate gene names: NA
Gene position: 7466345-7465521 (Counterclockwise)
Preceding gene: 158317879
Following gene: 158317875
Centisome position: 83.13
GC content: 69.94
Gene sequence:
>825_bases GTGCTCGCCGAGCTGCTCGCCTTCCTGCGGCGCCGCATCACCGGGGACTACACGGTGGACGAGCATGGCTTCGACCCCGA CCTGACCGAGCACATCGTGGCGCCGCTGCTGCGCCCGATCTACCGGAGCTACTTCCGGGTCGAGACCCGGGGCCTGGAGA ACATCCCGGACAAGGGCGGGGCGCTCGTCGTCTCGAACCACTCGGGGACGGTACCCCTCGACGCGCTGATGACCGCCCTG GCGATTCTCGACCACCACCCGGCCCACCGTCACCTGCGGATGCTGGCCGCGGACCTGGTGTTCGCCCTGCCGTTCCTCGC GCCGTTGGCCCGCAAGACCGGCAACACCCTCGCCTGCCAGGCGGACGCCGAGCGTCTGCTGGGAGCGGGGCATCTGGTCG GGGTGTGGCCGGAGGGCTTCAAGGGCATCGGCAAGCCGTTCAGCGACCGCTACAAGCTCCAGCGGTTCGGCCGCGGCGGG TTCGTCTCCGCGGCGCTGCGCACCGGGGTGCCGATCGTCCCGTGCACGGTCGTGGGCGCCGAGGAGATCTACCCGATGGT CGGCAACGCCAGGACGCTGGCGCGGCTGCTGGGGCTGCCCTACCTCCCGATCACGCCGACCTTCCCCTGGCTGGGGCTGC TGGGGCTCATCCCGCTGCCGAGCAAGTGGATCATCGAGTTCGGTGAGCCGGTGGATACCACCGAGTACACGCAGGCCGCG GCCGAGGACCCGATGCTCGTCTTTGAGCTCACCGACCGCATCCGCGAGACGATCCAGCACACGCTGTACGGCCTGCTGAT GCAGCGCCGCTCGGTGTTCTTCTGA
Upstream 100 bases:
>100_bases CCCTGGCGGCAAGGCGGGCTCTGGTAGCGGCGCGGATCCTGGTGGCGAGGCGGTCGGGCCGCCGGCCGAGCCGGTCGCGG ACGCCGGTGAGCTGGAGCGG
Downstream 100 bases:
>100_bases TCGCCGCGGCCCGACGGCCTCCGCCGGGCCGGCGTCATCCTGACCATCAGGTTCCGCCGTAGCGGCGGCGCAGCGCCATG CCGGCAGCGACGCCGCCGCC
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAELLAFLRRRITGDYTVDEHGFDPDLTEHIVAPLLRPIYRSYFRVETRGLENIPDKGGALVVSNHSGTVPLDALMTAL AILDHHPAHRHLRMLAADLVFALPFLAPLARKTGNTLACQADAERLLGAGHLVGVWPEGFKGIGKPFSDRYKLQRFGRGG FVSAALRTGVPIVPCTVVGAEEIYPMVGNARTLARLLGLPYLPITPTFPWLGLLGLIPLPSKWIIEFGEPVDTTEYTQAA AEDPMLVFELTDRIRETIQHTLYGLLMQRRSVFF
Sequences:
>Translated_274_residues MLAELLAFLRRRITGDYTVDEHGFDPDLTEHIVAPLLRPIYRSYFRVETRGLENIPDKGGALVVSNHSGTVPLDALMTAL AILDHHPAHRHLRMLAADLVFALPFLAPLARKTGNTLACQADAERLLGAGHLVGVWPEGFKGIGKPFSDRYKLQRFGRGG FVSAALRTGVPIVPCTVVGAEEIYPMVGNARTLARLLGLPYLPITPTFPWLGLLGLIPLPSKWIIEFGEPVDTTEYTQAA AEDPMLVFELTDRIRETIQHTLYGLLMQRRSVFF >Mature_274_residues MLAELLAFLRRRITGDYTVDEHGFDPDLTEHIVAPLLRPIYRSYFRVETRGLENIPDKGGALVVSNHSGTVPLDALMTAL AILDHHPAHRHLRMLAADLVFALPFLAPLARKTGNTLACQADAERLLGAGHLVGVWPEGFKGIGKPFSDRYKLQRFGRGG FVSAALRTGVPIVPCTVVGAEEIYPMVGNARTLARLLGLPYLPITPTFPWLGLLGLIPLPSKWIIEFGEPVDTTEYTQAA AEDPMLVFELTDRIRETIQHTLYGLLMQRRSVFF
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2427 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR016676 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 30361; Mature: 30361
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAELLAFLRRRITGDYTVDEHGFDPDLTEHIVAPLLRPIYRSYFRVETRGLENIPDKGG CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ALVVSNHSGTVPLDALMTALAILDHHPAHRHLRMLAADLVFALPFLAPLARKTGNTLACQ EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH ADAERLLGAGHLVGVWPEGFKGIGKPFSDRYKLQRFGRGGFVSAALRTGVPIVPCTVVGA HHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECH EEIYPMVGNARTLARLLGLPYLPITPTFPWLGLLGLIPLPSKWIIEFGEPVDTTEYTQAA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHH AEDPMLVFELTDRIRETIQHTLYGLLMQRRSVFF CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAELLAFLRRRITGDYTVDEHGFDPDLTEHIVAPLLRPIYRSYFRVETRGLENIPDKGG CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ALVVSNHSGTVPLDALMTALAILDHHPAHRHLRMLAADLVFALPFLAPLARKTGNTLACQ EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH ADAERLLGAGHLVGVWPEGFKGIGKPFSDRYKLQRFGRGGFVSAALRTGVPIVPCTVVGA HHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECH EEIYPMVGNARTLARLLGLPYLPITPTFPWLGLLGLIPLPSKWIIEFGEPVDTTEYTQAA HHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHH AEDPMLVFELTDRIRETIQHTLYGLLMQRRSVFF CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]