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The map label for this gene is spo0A [H]

Identifier: 158317848

GI number: 158317848

Start: 7433963

End: 7434328

Strand: Reverse

Name: spo0A [H]

Synonym: Franean1_6106

Alternate gene names: 158317848

Gene position: 7434328-7433963 (Counterclockwise)

Preceding gene: 158317850

Following gene: 158317847

Centisome position: 82.77

GC content: 71.31

Gene sequence:

>366_bases
GTGATCGCGGATGACGCCGACGGGCTGCGCGAGCTCCTCTGCCTCCTGTTCGACACCGAGCCGGACTTCATCGTGGTCGG
CCGGGCGACGAACGGGGCGGAGGCCGTCGAGGTCGTCACCCAGACCGCGCCCGACCTCGTCCTGCTGGATGTCGCGATGC
CCGTGCTCGACGGCATCGGCGCCCTGCCGCATGTGCGGATGGCGGCGCCCGACGCGCGAGTGGTGATCTTCACCGGCTTC
TCCGAGAGCGCGCTGCGCGACGAGGTCATGGCCCTCGGCGCGGACGAGCTGATGGAGAAGGACCTGTCCACCAGCGCGCT
GCTCGACCGGCTCCGGCAGATGTGCCGGCGCCCACGCCTCGTCTGA

Upstream 100 bases:

>100_bases
TCTCAACGGAGCCGGTCTCAACGGAGCCGGTGTCTCCGACGCCGAGGTGGCCCGCGCGCCGGCCGGGCGCGGCCGGTTCC
GGCCCGGTCCGTTCCGCGTC

Downstream 100 bases:

>100_bases
GCCCGCGGGCGAGCCCGTCCGGCGGCGCCGGACCGTGGTGGGTCCCGCCCGGGAGGCCCCGGTCCCGCCCCGTCCCGCTT
CGGCCCGGTTCTGGCCGTGC

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MIADDADGLRELLCLLFDTEPDFIVVGRATNGAEAVEVVTQTAPDLVLLDVAMPVLDGIGALPHVRMAAPDARVVIFTGF
SESALRDEVMALGADELMEKDLSTSALLDRLRQMCRRPRLV

Sequences:

>Translated_121_residues
MIADDADGLRELLCLLFDTEPDFIVVGRATNGAEAVEVVTQTAPDLVLLDVAMPVLDGIGALPHVRMAAPDARVVIFTGF
SESALRDEVMALGADELMEKDLSTSALLDRLRQMCRRPRLV
>Mature_121_residues
MIADDADGLRELLCLLFDTEPDFIVVGRATNGAEAVEVVTQTAPDLVLLDVAMPVLDGIGALPHVRMAAPDARVVIFTGF
SESALRDEVMALGADELMEKDLSTSALLDRLRQMCRRPRLV

Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR014879
- InterPro:   IPR012052
- InterPro:   IPR011991
- ProDom:   PD010908 [H]

Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]

EC number: NA

Molecular weight: Translated: 13108; Mature: 13108

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADDADGLRELLCLLFDTEPDFIVVGRATNGAEAVEVVTQTAPDLVLLDVAMPVLDGIG
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCC
ALPHVRMAAPDARVVIFTGFSESALRDEVMALGADELMEKDLSTSALLDRLRQMCRRPRL
CCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
V
C
>Mature Secondary Structure
MIADDADGLRELLCLLFDTEPDFIVVGRATNGAEAVEVVTQTAPDLVLLDVAMPVLDGIG
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCC
ALPHVRMAAPDARVVIFTGFSESALRDEVMALGADELMEKDLSTSALLDRLRQMCRRPRL
CCCCCEECCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7885226 [H]