| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317843
Identifier: 158317843
GI number: 158317843
Start: 7428373
End: 7428834
Strand: Direct
Name: 158317843
Synonym: Franean1_6101
Alternate gene names: NA
Gene position: 7428373-7428834 (Clockwise)
Preceding gene: 158317838
Following gene: 158317849
Centisome position: 82.7
GC content: 75.32
Gene sequence:
>462_bases ATGCGCGGTCTCCTGGTGATCGGACACGGCTCGCGGCGGGCGGAGGCGAACGCCACGGTCGTCGAGCTCGCGCGCACGCT GGCCGGTGCCGACACCGACAGCCCAGCCCCAGCCCCCGGCGACGGGAGCGGCGGCGGCATGCCGACCGGCACGCCCCCCG CCTGGGACGCGGTGGAACCGGCCTTCCTCGAGATCGCCCGCCCGGACATCGCGGAGGGCTACGCCGCGCTGGTCCGCACC GGCTGCTCGGAGATCGTGGCGCATCCCTTCTTCCTGTTCGACGGGAACCACACCAGCCGCGACATCCCGGACGCCCTGGC GGCAGCGCAGACGGACCACCCCGGGACGAGCTGGACGGTCACCCAGCCGCTCGGGCTGCATCCGGGGGTCGTGCGGGCCG TGCAGGCCCGCATCGAGGACGCGCTGCACCAGGCCGCCGCCGCGGCACCGGCACATTCCTGA
Upstream 100 bases:
>100_bases TCTTCCGACGGCCGCCCGCCGTAACAGCACCCGGCCCGAGAGCCGGGCAGCCGGCCGCCGCTGGCGCCCGCAGCCCGCCA CTGGCGGCAGACTGGAGAGC
Downstream 100 bases:
>100_bases CCGTTGCGTTCGCGGGGTACCGCTAAGGCCACGGCAGTGCCCACCCCGCCCGCCCGGCCGCCGGCCCCACGACGCCGGCA GGCCCCCGACCGGGTCTGCC
Product: cobalamin (vitamin B12) biosynthesis protein CbiX
Products: NA
Alternate protein names: Sirohydrochlorin Cobaltochelatase; Uroporphyrin-III C-Methyltransferase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRGLLVIGHGSRRAEANATVVELARTLAGADTDSPAPAPGDGSGGGMPTGTPPAWDAVEPAFLEIARPDIAEGYAALVRT GCSEIVAHPFFLFDGNHTSRDIPDALAAAQTDHPGTSWTVTQPLGLHPGVVRAVQARIEDALHQAAAAAPAHS
Sequences:
>Translated_153_residues MRGLLVIGHGSRRAEANATVVELARTLAGADTDSPAPAPGDGSGGGMPTGTPPAWDAVEPAFLEIARPDIAEGYAALVRT GCSEIVAHPFFLFDGNHTSRDIPDALAAAQTDHPGTSWTVTQPLGLHPGVVRAVQARIEDALHQAAAAAPAHS >Mature_153_residues MRGLLVIGHGSRRAEANATVVELARTLAGADTDSPAPAPGDGSGGGMPTGTPPAWDAVEPAFLEIARPDIAEGYAALVRT GCSEIVAHPFFLFDGNHTSRDIPDALAAAQTDHPGTSWTVTQPLGLHPGVVRAVQARIEDALHQAAAAAPAHS
Specific function: Unknown
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15640; Mature: 15640
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLLVIGHGSRRAEANATVVELARTLAGADTDSPAPAPGDGSGGGMPTGTPPAWDAVEP CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AFLEIARPDIAEGYAALVRTGCSEIVAHPFFLFDGNHTSRDIPDALAAAQTDHPGTSWTV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCEEE TQPLGLHPGVVRAVQARIEDALHQAAAAAPAHS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRGLLVIGHGSRRAEANATVVELARTLAGADTDSPAPAPGDGSGGGMPTGTPPAWDAVEP CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AFLEIARPDIAEGYAALVRTGCSEIVAHPFFLFDGNHTSRDIPDALAAAQTDHPGTSWTV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCEEE TQPLGLHPGVVRAVQARIEDALHQAAAAAPAHS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA