| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317821
Identifier: 158317821
GI number: 158317821
Start: 7399282
End: 7400895
Strand: Direct
Name: 158317821
Synonym: Franean1_6079
Alternate gene names: NA
Gene position: 7399282-7400895 (Clockwise)
Preceding gene: 158317820
Following gene: 158317838
Centisome position: 82.38
GC content: 78.93
Gene sequence:
>1614_bases GTGGGTAGCCACTCGGCCGGCCGGCACTCCCGCGGAGGCTCCACCGCGACCGATCGCCGGCACCGCACCCCGGCTCCCGT CCCGGCCACCCCGGCCCCCGCTCAGGGCCCGCCGGTCGACGACCAGGCTCCCCGGCCCGTCCAGCCACTCACCGCCCGCG CGCGGACTCCCTACCCGCCGGGCGGTGCGCCGCGATCCGGCTGGGTCACCAGCGAGTGGAGCAGCAACCCGTCCGCAGCC ACGGCCTCGCTGCCGAGAAGGCTCCCCCCGCCCCGCCCGGCGACACCGCCCCCCGGCGAGATGGACACCGTCACCGGCCC GATCTCCATGAGCACCTCCCGGCGCCGGGAGCTGTTCGGCGACGACCCGCAGGACAGCCAGGCCGACTCCTACGGCCGGT CCGCGCGACGGGGGCAGCCGGCAGGCTCCGGGCGGTCGCCGGTGCGCGGGCGGCCCGCCGGCCGCCACGACGACACGGCA GACCTCGGCGTCCGCCGGCCCGGGGAGCTCGACCCGCAGAGCGTCGGCGACGACTCCGGAGCGGCGGGCGGGCCCGGCAC GTCCCGGATCTCGCTGTTCGAGCCGGGCCGACCGTCCGGATCCCTGCGCGTCGAAACGTCCCCCCGTTCCGGCACCCGCG CCGACGGTGCCCGCTCGACGACGGCCTCGCGCGCGGCGGCCTCCCGGAGCACGGCGTCCGGAGGCAGGGCGTCCGGAGGC ACGGCGGCACGGGCCGCCGGTTCAGCCACCGGGCGCGGCGCGCACCGGGCACCGGCACCGCGCCGCGGGCCGAGCCGGAC GCGCATGGTGGTCGCCGGTACCGCGTCCCTTGCCGGCCTCTCCGCGATCGTGACCGGTGTCGCGCTCAGCGGCGACCAGC CGGTCACCGCGGCCGGGCCCACCACGGGCGCCACGCCGCTCGTGCAGGTCGCCGGTTCCCGGCCGGCCGCGTTCGGCTCG GGCGACACCCAGGCCTCCCGCGACGGGCGCGTCCCGCTGCCGACCTACCCGGCGGCGGCGCCGACCACGGCGGGCGGGTC GGGCACGACCGGCCAGAGCGACAGCGGCTACCGCACCTCGCCGAACGGCCCGTCCGCGCCGTCGTACAGCGGGTCCGGCA CGCAGCAGCAGGGCCTGTCCGGCTACGAGATCCCGTTCGTCCCGCTGACCCCGCGGTCCACGGCGACGCCGTCACCGGCC GCCGGCGGCACGACCGCGCCGGGCACCACGACCCCGGGCACCACGACCCCGGGCACCACCACTCCGGGCACCACCACTCC GGGGAGCACGGCGCCGGGGACGACCGCCCCCGGGAGCACCGCTCCGGGCACCACCACGCCCACCCAGCCGGGAGCGACGA CCCCGCCCACGCAGCACGGCACCTCGCCGGCGCAGACCCGGCCGACCACGTCGAGCTCGAGCACTCCGGCGCCCGCGCCG ACCTCGCGCGAGGGCTCGCTCCCGTTCAACCCGACGCCGGTCGAGGTCACCCCGATCTGGGACCTGCTGTTCCCCTCCCA GAGCCAGAGCACGTCGACGTCGTCCAGCGCCCCGTCGGGCACCTCGGCGACACCCGCGCCGGCGGCGTCCTCAAGCACCC ACGCAGGCTCCTAG
Upstream 100 bases:
>100_bases CGGGGTAACGCAGCGCGAGGTCACCGAGTCCGTCACCGGGGCTCGCCGTCGGGGTCGGGCCGCGCCCGGCACCAGGTTCC GCAGGGCGTAGGCGGCCACC
Downstream 100 bases:
>100_bases CCGGGCTCCCGCCGGGAGGGGCACGGGCAGGCCCCTCCCGGCCGCGGAAAACCCCCTGCCGGCCGCCGCACGGCGCGGTG GCCGGCAGGGGGCCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MGSHSAGRHSRGGSTATDRRHRTPAPVPATPAPAQGPPVDDQAPRPVQPLTARARTPYPPGGAPRSGWVTSEWSSNPSAA TASLPRRLPPPRPATPPPGEMDTVTGPISMSTSRRRELFGDDPQDSQADSYGRSARRGQPAGSGRSPVRGRPAGRHDDTA DLGVRRPGELDPQSVGDDSGAAGGPGTSRISLFEPGRPSGSLRVETSPRSGTRADGARSTTASRAAASRSTASGGRASGG TAARAAGSATGRGAHRAPAPRRGPSRTRMVVAGTASLAGLSAIVTGVALSGDQPVTAAGPTTGATPLVQVAGSRPAAFGS GDTQASRDGRVPLPTYPAAAPTTAGGSGTTGQSDSGYRTSPNGPSAPSYSGSGTQQQGLSGYEIPFVPLTPRSTATPSPA AGGTTAPGTTTPGTTTPGTTTPGTTTPGSTAPGTTAPGSTAPGTTTPTQPGATTPPTQHGTSPAQTRPTTSSSSTPAPAP TSREGSLPFNPTPVEVTPIWDLLFPSQSQSTSTSSSAPSGTSATPAPAASSSTHAGS
Sequences:
>Translated_537_residues MGSHSAGRHSRGGSTATDRRHRTPAPVPATPAPAQGPPVDDQAPRPVQPLTARARTPYPPGGAPRSGWVTSEWSSNPSAA TASLPRRLPPPRPATPPPGEMDTVTGPISMSTSRRRELFGDDPQDSQADSYGRSARRGQPAGSGRSPVRGRPAGRHDDTA DLGVRRPGELDPQSVGDDSGAAGGPGTSRISLFEPGRPSGSLRVETSPRSGTRADGARSTTASRAAASRSTASGGRASGG TAARAAGSATGRGAHRAPAPRRGPSRTRMVVAGTASLAGLSAIVTGVALSGDQPVTAAGPTTGATPLVQVAGSRPAAFGS GDTQASRDGRVPLPTYPAAAPTTAGGSGTTGQSDSGYRTSPNGPSAPSYSGSGTQQQGLSGYEIPFVPLTPRSTATPSPA AGGTTAPGTTTPGTTTPGTTTPGTTTPGSTAPGTTAPGSTAPGTTTPTQPGATTPPTQHGTSPAQTRPTTSSSSTPAPAP TSREGSLPFNPTPVEVTPIWDLLFPSQSQSTSTSSSAPSGTSATPAPAASSSTHAGS >Mature_536_residues GSHSAGRHSRGGSTATDRRHRTPAPVPATPAPAQGPPVDDQAPRPVQPLTARARTPYPPGGAPRSGWVTSEWSSNPSAAT ASLPRRLPPPRPATPPPGEMDTVTGPISMSTSRRRELFGDDPQDSQADSYGRSARRGQPAGSGRSPVRGRPAGRHDDTAD LGVRRPGELDPQSVGDDSGAAGGPGTSRISLFEPGRPSGSLRVETSPRSGTRADGARSTTASRAAASRSTASGGRASGGT AARAAGSATGRGAHRAPAPRRGPSRTRMVVAGTASLAGLSAIVTGVALSGDQPVTAAGPTTGATPLVQVAGSRPAAFGSG DTQASRDGRVPLPTYPAAAPTTAGGSGTTGQSDSGYRTSPNGPSAPSYSGSGTQQQGLSGYEIPFVPLTPRSTATPSPAA GGTTAPGTTTPGTTTPGTTTPGTTTPGSTAPGTTAPGSTAPGTTTPTQPGATTPPTQHGTSPAQTRPTTSSSSTPAPAPT SREGSLPFNPTPVEVTPIWDLLFPSQSQSTSTSSSAPSGTSATPAPAASSSTHAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52905; Mature: 52773
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSHSAGRHSRGGSTATDRRHRTPAPVPATPAPAQGPPVDDQAPRPVQPLTARARTPYPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC GGAPRSGWVTSEWSSNPSAATASLPRRLPPPRPATPPPGEMDTVTGPISMSTSRRRELFG CCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DDPQDSQADSYGRSARRGQPAGSGRSPVRGRPAGRHDDTADLGVRRPGELDPQSVGDDSG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCCC AAGGPGTSRISLFEPGRPSGSLRVETSPRSGTRADGARSTTASRAAASRSTASGGRASGG CCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC TAARAAGSATGRGAHRAPAPRRGPSRTRMVVAGTASLAGLSAIVTGVALSGDQPVTAAGP CHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHEECCCCCEECCCC TTGATPLVQVAGSRPAAFGSGDTQASRDGRVPLPTYPAAAPTTAGGSGTTGQSDSGYRTS CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNGPSAPSYSGSGTQQQGLSGYEIPFVPLTPRSTATPSPAAGGTTAPGTTTPGTTTPGTT CCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPGTTTPGSTAPGTTAPGSTAPGTTTPTQPGATTPPTQHGTSPAQTRPTTSSSSTPAPAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSREGSLPFNPTPVEVTPIWDLLFPSQSQSTSTSSSAPSGTSATPAPAASSSTHAGS CCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSHSAGRHSRGGSTATDRRHRTPAPVPATPAPAQGPPVDDQAPRPVQPLTARARTPYPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC GGAPRSGWVTSEWSSNPSAATASLPRRLPPPRPATPPPGEMDTVTGPISMSTSRRRELFG CCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DDPQDSQADSYGRSARRGQPAGSGRSPVRGRPAGRHDDTADLGVRRPGELDPQSVGDDSG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCCC AAGGPGTSRISLFEPGRPSGSLRVETSPRSGTRADGARSTTASRAAASRSTASGGRASGG CCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC TAARAAGSATGRGAHRAPAPRRGPSRTRMVVAGTASLAGLSAIVTGVALSGDQPVTAAGP CHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHEECCCCCEECCCC TTGATPLVQVAGSRPAAFGSGDTQASRDGRVPLPTYPAAAPTTAGGSGTTGQSDSGYRTS CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNGPSAPSYSGSGTQQQGLSGYEIPFVPLTPRSTATPSPAAGGTTAPGTTTPGTTTPGTT CCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPGTTTPGSTAPGTTAPGSTAPGTTTPTQPGATTPPTQHGTSPAQTRPTTSSSSTPAPAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSREGSLPFNPTPVEVTPIWDLLFPSQSQSTSTSSSAPSGTSATPAPAASSSTHAGS CCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA