Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317815

Identifier: 158317815

GI number: 158317815

Start: 7390484

End: 7391425

Strand: Direct

Name: 158317815

Synonym: Franean1_6073

Alternate gene names: NA

Gene position: 7390484-7391425 (Clockwise)

Preceding gene: 158317811

Following gene: 158317816

Centisome position: 82.28

GC content: 71.87

Gene sequence:

>942_bases
ATGCTGCCGGCCCGCGGTGTGGCCCGTCGATTACCTGCGAGGTCATGGCCCGACGGCGGCGGCGGAGCCTACGGTCTTGC
CATGGTCCTCGCCCGCGAGCCCGGCCGGTCGGTCGGAGCGTTGCTGCGCGGCTGGCGGGAACGACGCAGGCTGACCCAGC
TGGGCCTCGCTGAGCGCGCGAACGTCTCGACGCGGCGCATCAGCTTCGTGGAGAACGGGCGGTCCCGGCCGACGAGCGAG
ATGATCATCATGCTGTCCGAACATCTCGGCGTGCCGCTGCGGGAACGCAACCAGTTGCTGCTGGCCGGCGGTTACGCACC
GGCCTACTCCGAGAACGATCTCGCCTCGCCGCCGATGTCCGCGGTGAGTGCGGCGATCGACCGGGTGCTCGCCGGCCTCG
GGCCGCTGCCCGCGGCGGTCATCGACCGGCGCTGGGAGCTCGTCGCCGCGAACGACGCGATCGACCTGTTCACCGCGGGC
GCGGCCGCACGGCTGCTGGAACCCCCGGTCAACGTGCTCCGGCTCAGCCTGCACCCCGAGGGCATGGCCCCGCGCATCCT
GAACCTTCCGGAGTGGAGGACACACCTGCTCGACCGCCTGGCCAGGCAGGCCGACACGACCGGAGACGCGGTCCTCCACG
ACCTCCACACCGAGCTGAGCGCCTATCCCGTGCCCGACCGCGGCGCCAACGGGGTCGGGCACGGCGCCGCCGACGACGGC
GCGCGCGGCCGTGCGGGTCGCCCGGCCGGCCTCTGGACGGCGAACGGCATAGTCATCCCGATGCGCTACCGGTCACCCCG
AGGCGAGCTCTCGCTCTTCACCGCCACCACCGTTTTCGGCACGCCCACTGACGTGACCGTCTCGGAGCTCGCAGTCGAGA
CCTTCTTCCCAGCGGACGCCCACACCGCCGGCCTTCTCTACGGATCCTTCGAGGCCTCATGA

Upstream 100 bases:

>100_bases
CGGTGTGTCCTCACTCTCGGATTCGTCACTGTTGGGTTCGTCGACGGTGGATCTGGCTGCCGGGCGGCGGGTCTGCCCGG
CCGCTCCGGCGGTGGGACCG

Downstream 100 bases:

>100_bases
GCGGACCTGACGTCTCGGGCTGCACGGGCTACCTGCCGCCACGGCCCCACCGGTCGGTCGAGGAACTGCTCGGGCCCCGC
CCCTGGCGGTAGCCATGATC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE
MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG
AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG
ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS

Sequences:

>Translated_313_residues
MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE
MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG
AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG
ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS
>Mature_313_residues
MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE
MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG
AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG
ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33481; Mature: 33481

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERA
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC
NVSTRRISFVENGRSRPTSEMIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMS
CCCHHEEEHHHCCCCCCHHHHHEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
AVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAGAAARLLEPPVNVLRLSLHPE
HHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHCCHHHHHHCCCCHHEEEEECCC
GMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADA
CCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCC
HTAGLLYGSFEAS
CCCEEEEECCCCC
>Mature Secondary Structure
MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERA
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC
NVSTRRISFVENGRSRPTSEMIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMS
CCCHHEEEHHHCCCCCCHHHHHEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
AVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAGAAARLLEPPVNVLRLSLHPE
HHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHCCHHHHHHCCCCHHEEEEECCC
GMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADA
CCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCC
HTAGLLYGSFEAS
CCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA