| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317815
Identifier: 158317815
GI number: 158317815
Start: 7390484
End: 7391425
Strand: Direct
Name: 158317815
Synonym: Franean1_6073
Alternate gene names: NA
Gene position: 7390484-7391425 (Clockwise)
Preceding gene: 158317811
Following gene: 158317816
Centisome position: 82.28
GC content: 71.87
Gene sequence:
>942_bases ATGCTGCCGGCCCGCGGTGTGGCCCGTCGATTACCTGCGAGGTCATGGCCCGACGGCGGCGGCGGAGCCTACGGTCTTGC CATGGTCCTCGCCCGCGAGCCCGGCCGGTCGGTCGGAGCGTTGCTGCGCGGCTGGCGGGAACGACGCAGGCTGACCCAGC TGGGCCTCGCTGAGCGCGCGAACGTCTCGACGCGGCGCATCAGCTTCGTGGAGAACGGGCGGTCCCGGCCGACGAGCGAG ATGATCATCATGCTGTCCGAACATCTCGGCGTGCCGCTGCGGGAACGCAACCAGTTGCTGCTGGCCGGCGGTTACGCACC GGCCTACTCCGAGAACGATCTCGCCTCGCCGCCGATGTCCGCGGTGAGTGCGGCGATCGACCGGGTGCTCGCCGGCCTCG GGCCGCTGCCCGCGGCGGTCATCGACCGGCGCTGGGAGCTCGTCGCCGCGAACGACGCGATCGACCTGTTCACCGCGGGC GCGGCCGCACGGCTGCTGGAACCCCCGGTCAACGTGCTCCGGCTCAGCCTGCACCCCGAGGGCATGGCCCCGCGCATCCT GAACCTTCCGGAGTGGAGGACACACCTGCTCGACCGCCTGGCCAGGCAGGCCGACACGACCGGAGACGCGGTCCTCCACG ACCTCCACACCGAGCTGAGCGCCTATCCCGTGCCCGACCGCGGCGCCAACGGGGTCGGGCACGGCGCCGCCGACGACGGC GCGCGCGGCCGTGCGGGTCGCCCGGCCGGCCTCTGGACGGCGAACGGCATAGTCATCCCGATGCGCTACCGGTCACCCCG AGGCGAGCTCTCGCTCTTCACCGCCACCACCGTTTTCGGCACGCCCACTGACGTGACCGTCTCGGAGCTCGCAGTCGAGA CCTTCTTCCCAGCGGACGCCCACACCGCCGGCCTTCTCTACGGATCCTTCGAGGCCTCATGA
Upstream 100 bases:
>100_bases CGGTGTGTCCTCACTCTCGGATTCGTCACTGTTGGGTTCGTCGACGGTGGATCTGGCTGCCGGGCGGCGGGTCTGCCCGG CCGCTCCGGCGGTGGGACCG
Downstream 100 bases:
>100_bases GCGGACCTGACGTCTCGGGCTGCACGGGCTACCTGCCGCCACGGCCCCACCGGTCGGTCGAGGAACTGCTCGGGCCCCGC CCCTGGCGGTAGCCATGATC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS
Sequences:
>Translated_313_residues MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS >Mature_313_residues MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERANVSTRRISFVENGRSRPTSE MIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMSAVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAG AAARLLEPPVNVLRLSLHPEGMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADAHTAGLLYGSFEAS
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33481; Mature: 33481
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERA CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC NVSTRRISFVENGRSRPTSEMIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMS CCCHHEEEHHHCCCCCCHHHHHEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH AVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAGAAARLLEPPVNVLRLSLHPE HHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHCCHHHHHHCCCCHHEEEEECCC GMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADA CCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCC HTAGLLYGSFEAS CCCEEEEECCCCC >Mature Secondary Structure MLPARGVARRLPARSWPDGGGGAYGLAMVLAREPGRSVGALLRGWRERRRLTQLGLAERA CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHC NVSTRRISFVENGRSRPTSEMIIMLSEHLGVPLRERNQLLLAGGYAPAYSENDLASPPMS CCCHHEEEHHHCCCCCCHHHHHEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH AVSAAIDRVLAGLGPLPAAVIDRRWELVAANDAIDLFTAGAAARLLEPPVNVLRLSLHPE HHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHCCHHHHHHCCCCHHEEEEECCC GMAPRILNLPEWRTHLLDRLARQADTTGDAVLHDLHTELSAYPVPDRGANGVGHGAADDG CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ARGRAGRPAGLWTANGIVIPMRYRSPRGELSLFTATTVFGTPTDVTVSELAVETFFPADA CCCCCCCCCCEEECCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCC HTAGLLYGSFEAS CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA