| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pyrE [H]
Identifier: 158317813
GI number: 158317813
Start: 7389341
End: 7389868
Strand: Reverse
Name: pyrE [H]
Synonym: Franean1_6071
Alternate gene names: 158317813
Gene position: 7389868-7389341 (Counterclockwise)
Preceding gene: 158317814
Following gene: 158317812
Centisome position: 82.27
GC content: 72.16
Gene sequence:
>528_bases GTGGCCGACATCGAAGCGCTGGCCGCCCGGGTGCGGGCGGCGTCTCACCTGACCGGGACGTTCCTCCTCCGGTCGGGCCG TACGAGCACCGAGTACTTCGACAAGTACCTGTTCGAGGCCGAGCCGGCGCTGCTCGCCGACATCGTCGAGGCGATGGCGG CGCATCTCCCGCCGAACACCGATCTCCTCGCCGGCCTGGAGCTGGGCGGCGTTCCGCTGGCCACGCTGCTGTCGGCACGC ACCGGCCTGCCGGCCAGGTTCGTCCGCAAGAAGGCGAAGGAGTACGGAACCCGGCGCATAGCCGAGGGCGGCGAGGTCGA GGGTCGGCGGATCGTCCTGGTCGAGGACGTCGTGACCAGCGGCGGGGCCGTGCTCGACGCCACCCGGGTGCTGCGCGAGC AGGGCGCGGTCGTCGAGGACGTCCTGTGCGTCATCGATCGCCAGGAGGGTGGCCGGGAGCGGCTCGCGGAGATCGGCCTG ACGCTGCTCCCCACTCTCACCCGCGCCGATCTCGACGCGGCTCGCTAG
Upstream 100 bases:
>100_bases CTACACCGGCGCCTACTGCCGCACCGCTGCCCGCCGCATCGCCTCCATCGTCGGCCGAAGCCTGCTGGCGGCGCAGTGGC GGGCCGTAGAGTCGGCAGAC
Downstream 100 bases:
>100_bases CACCCGGACAGCCTGACGTCGGACACGCGGGACCGGGATGACTTCGGACGTGGCCGGAGTGTTGTTCGTCTATGGGACGC TGCGCTTCGACGTGGTCGTC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MADIEALAARVRAASHLTGTFLLRSGRTSTEYFDKYLFEAEPALLADIVEAMAAHLPPNTDLLAGLELGGVPLATLLSAR TGLPARFVRKKAKEYGTRRIAEGGEVEGRRIVLVEDVVTSGGAVLDATRVLREQGAVVEDVLCVIDRQEGGRERLAEIGL TLLPTLTRADLDAAR
Sequences:
>Translated_175_residues MADIEALAARVRAASHLTGTFLLRSGRTSTEYFDKYLFEAEPALLADIVEAMAAHLPPNTDLLAGLELGGVPLATLLSAR TGLPARFVRKKAKEYGTRRIAEGGEVEGRRIVLVEDVVTSGGAVLDATRVLREQGAVVEDVLCVIDRQEGGRERLAEIGL TLLPTLTRADLDAAR >Mature_174_residues ADIEALAARVRAASHLTGTFLLRSGRTSTEYFDKYLFEAEPALLADIVEAMAAHLPPNTDLLAGLELGGVPLATLLSART GLPARFVRKKAKEYGTRRIAEGGEVEGRRIVLVEDVVTSGGAVLDATRVLREQGAVVEDVLCVIDRQEGGRERLAEIGLT LLPTLTRADLDAAR
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=156, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1790073, Length=152, Percent_Identity=34.2105263157895, Blast_Score=71, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17554964, Length=158, Percent_Identity=37.3417721518987, Blast_Score=102, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17508631, Length=153, Percent_Identity=35.9477124183007, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323927, Length=144, Percent_Identity=31.9444444444444, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323530, Length=144, Percent_Identity=30.5555555555556, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI17933654, Length=152, Percent_Identity=33.5526315789474, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 18778; Mature: 18647
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIEALAARVRAASHLTGTFLLRSGRTSTEYFDKYLFEAEPALLADIVEAMAAHLPPNT CCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC DLLAGLELGGVPLATLLSARTGLPARFVRKKAKEYGTRRIAEGGEVEGRRIVLVEDVVTS CCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHC GGAVLDATRVLREQGAVVEDVLCVIDRQEGGRERLAEIGLTLLPTLTRADLDAAR CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCCCC >Mature Secondary Structure ADIEALAARVRAASHLTGTFLLRSGRTSTEYFDKYLFEAEPALLADIVEAMAAHLPPNT CCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC DLLAGLELGGVPLATLLSARTGLPARFVRKKAKEYGTRRIAEGGEVEGRRIVLVEDVVTS CCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHC GGAVLDATRVLREQGAVVEDVLCVIDRQEGGRERLAEIGLTLLPTLTRADLDAAR CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA