| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is guaB [H]
Identifier: 158317740
GI number: 158317740
Start: 7315857
End: 7317650
Strand: Reverse
Name: guaB [H]
Synonym: Franean1_5998
Alternate gene names: 158317740
Gene position: 7317650-7315857 (Counterclockwise)
Preceding gene: 158317743
Following gene: 158317739
Centisome position: 81.47
GC content: 71.96
Gene sequence:
>1794_bases TTGCCGGGCCTCTACGATGGAGTATCACCGTCGCCCGACCGGCGGGCCGCGCGGAGCCCAGCATGCTTCACCCGCCTGCC CGGGCAGACCGGCTCGCGCCGGTTCCCGGGCGCGGGACTCCCCAGACATCGCGGGGACGCTCCCGCCGGCGCCGGGCCGA TGCGAACGGAAGGTGCCATGGACGGTTCCCCCGCCAACCCGACGACCTCGATCACGCGCGCGACCGGGGAACCCGACCTC GACCAGTCGCCCGTCCGGCACGTCGCTGACAGCCTGGGCGCCGAGGGGCCGGCGCTCCCGCCGAAGCTCGCGATGCTCGG CCTCACCTTCGACGACGTCCTGCTGCTGCCGGCGGCGTCCGAGGTGGCGCCGTCGGGCGTCGACACGACCACGCGGCTGT CCCGCAACATCTCGCTGGCGGTCCCGCTGGTGTCCTCCGCGATGGACACCGTGACCGAGGCCCGGATGGCGATCGCGATG GCCCGCCAGGGCGGCGTCGGCGTGCTGCACCGCAACCTGTCCGTCGACGACCAGGCACAGCAGGTCGACATGGTGAAGCG GTCCGAGTCGGGGATGATCACCTCCCCGATCACCTGCGGGCCGGACGCCACCATCGAAGAGGCGAACGTGCTCATGGCGC GTTACCGCATCTCCGGCGTCCCGGTGACCGAGCCGGACGGCCGCCTCGTCGGGATCGTGACCAACCGCGACATCCGCTTC GAGCGGGACTACACCCGCCGCGTCCACGAAGTGATGACCCGCATGCCGCTGATCACGGCACCGGTCGGGGTCTCGGCGGA CGACGCGCTCGCTCTGCTGCGGCACAACAAGGTCGAGAAGCTGCCCATCGTCGACGGGCACGACCGGCTGTGCGGACTGA TCACGGTCAAGGACTTCACCAAGCGCGAGCAGTACCCGCGGGCGACCAAGGACGCGGACGGCCGCCTCGTGGTCGGCGCC GCGGTCGGCGTCGGCGAGGACGCGCTGAAGCGCGCCCAGGTCCTCGTCGCCGCCGGGGTGGACTTCCTCGTCGTCGACAC CGCGCACGGCCACCACCACGCCGTCCCCGACATGATCGCCCGGATCAAGGCCGAGATGCCCGCCGGGGTGGACGGCCGTC CGCTCGACGTCATCGGTGGCAACATCGCCACCGCGGCCGGGGCCGCCGCGCTCATCGCGGCCGGCGCCGACGCCGTCAAG GTCGGGGTCGGGCCGGGCTCGATCTGCACGACCCGGGTGGTCACCGGCGTGGGTGTTCCGCAGGTCACCGCGATCTACGA GGCGGCGCGGGCGGCGCGGGCCGCCGGCGTGCCGGTCATCGGCGACGGCGGGCTGCAGTACTCCGGTGACATCGCCAAGG CGATTGCCGTCGGCGCGGACACCGTGATGCTCGGCAGCCTGCTCGCCGGTGTCGACGAGAGCCCCGGTGAGCTCATCTTC ATCAACGGCAAGCAGTACAAGTCCTACCGGGGGATGGGCTCGCTCGGCGCCATGCGCAGCCGCGGCGACACCCGCTCCTA CTCCAAGGACCGCTACTTCCAGGACGACGTCCTCTCCGACGACAAGCTCGTCCCCCAGGGTGTCGAGGGCCAGGTGCCCT ACCGCGGCTCGCTGGCCGGGATGGCCCACCAGCTGATCGGCGGCCTGCAGGCCGCGATGGGGTACACGGGTGCCGCGACC ATCCGTGATCTCCAGGAGAACAGCCAGCTGGTGCGGATCACGTCGGCTGGCCTGACCGAGAGCCACGCGCACGACGTCCA GATGACGGTCGAGGCGCCGAACTACACCCGGTGA
Upstream 100 bases:
>100_bases TTGTTTGGGCGGGGTGCCCACGGACGGGTGCGCCCCCGACCCCGGCGCCCGTCCTGTGGCATGCGTGGTGCTCTCGGTCA CGCCGGGGAGTTCGGAGCCG
Downstream 100 bases:
>100_bases GTCGCGGCCGGTGGTCGGGAGGTCTCTCTCCGCCGCCGGCCGCCAGCCGTTCCAGCGGCCGCGCGGCGCTCGTCGTTCCG TATCCCCGCCGCCGGACGCC
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MPGLYDGVSPSPDRRAARSPACFTRLPGQTGSRRFPGAGLPRHRGDAPAGAGPMRTEGAMDGSPANPTTSITRATGEPDL DQSPVRHVADSLGAEGPALPPKLAMLGLTFDDVLLLPAASEVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAM ARQGGVGVLHRNLSVDDQAQQVDMVKRSESGMITSPITCGPDATIEEANVLMARYRISGVPVTEPDGRLVGIVTNRDIRF ERDYTRRVHEVMTRMPLITAPVGVSADDALALLRHNKVEKLPIVDGHDRLCGLITVKDFTKREQYPRATKDADGRLVVGA AVGVGEDALKRAQVLVAAGVDFLVVDTAHGHHHAVPDMIARIKAEMPAGVDGRPLDVIGGNIATAAGAAALIAAGADAVK VGVGPGSICTTRVVTGVGVPQVTAIYEAARAARAAGVPVIGDGGLQYSGDIAKAIAVGADTVMLGSLLAGVDESPGELIF INGKQYKSYRGMGSLGAMRSRGDTRSYSKDRYFQDDVLSDDKLVPQGVEGQVPYRGSLAGMAHQLIGGLQAAMGYTGAAT IRDLQENSQLVRITSAGLTESHAHDVQMTVEAPNYTR
Sequences:
>Translated_597_residues MPGLYDGVSPSPDRRAARSPACFTRLPGQTGSRRFPGAGLPRHRGDAPAGAGPMRTEGAMDGSPANPTTSITRATGEPDL DQSPVRHVADSLGAEGPALPPKLAMLGLTFDDVLLLPAASEVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAM ARQGGVGVLHRNLSVDDQAQQVDMVKRSESGMITSPITCGPDATIEEANVLMARYRISGVPVTEPDGRLVGIVTNRDIRF ERDYTRRVHEVMTRMPLITAPVGVSADDALALLRHNKVEKLPIVDGHDRLCGLITVKDFTKREQYPRATKDADGRLVVGA AVGVGEDALKRAQVLVAAGVDFLVVDTAHGHHHAVPDMIARIKAEMPAGVDGRPLDVIGGNIATAAGAAALIAAGADAVK VGVGPGSICTTRVVTGVGVPQVTAIYEAARAARAAGVPVIGDGGLQYSGDIAKAIAVGADTVMLGSLLAGVDESPGELIF INGKQYKSYRGMGSLGAMRSRGDTRSYSKDRYFQDDVLSDDKLVPQGVEGQVPYRGSLAGMAHQLIGGLQAAMGYTGAAT IRDLQENSQLVRITSAGLTESHAHDVQMTVEAPNYTR >Mature_596_residues PGLYDGVSPSPDRRAARSPACFTRLPGQTGSRRFPGAGLPRHRGDAPAGAGPMRTEGAMDGSPANPTTSITRATGEPDLD QSPVRHVADSLGAEGPALPPKLAMLGLTFDDVLLLPAASEVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAMA RQGGVGVLHRNLSVDDQAQQVDMVKRSESGMITSPITCGPDATIEEANVLMARYRISGVPVTEPDGRLVGIVTNRDIRFE RDYTRRVHEVMTRMPLITAPVGVSADDALALLRHNKVEKLPIVDGHDRLCGLITVKDFTKREQYPRATKDADGRLVVGAA VGVGEDALKRAQVLVAAGVDFLVVDTAHGHHHAVPDMIARIKAEMPAGVDGRPLDVIGGNIATAAGAAALIAAGADAVKV GVGPGSICTTRVVTGVGVPQVTAIYEAARAARAAGVPVIGDGGLQYSGDIAKAIAVGADTVMLGSLLAGVDESPGELIFI NGKQYKSYRGMGSLGAMRSRGDTRSYSKDRYFQDDVLSDDKLVPQGVEGQVPYRGSLAGMAHQLIGGLQAAMGYTGAATI RDLQENSQLVRITSAGLTESHAHDVQMTVEAPNYTR
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI34328928, Length=465, Percent_Identity=44.3010752688172, Blast_Score=353, Evalue=2e-97, Organism=Homo sapiens, GI34328930, Length=465, Percent_Identity=44.3010752688172, Blast_Score=353, Evalue=3e-97, Organism=Homo sapiens, GI217035146, Length=465, Percent_Identity=44.3010752688172, Blast_Score=353, Evalue=3e-97, Organism=Homo sapiens, GI156616279, Length=465, Percent_Identity=44.3010752688172, Blast_Score=353, Evalue=4e-97, Organism=Homo sapiens, GI66933016, Length=461, Percent_Identity=44.2516268980477, Blast_Score=352, Evalue=7e-97, Organism=Homo sapiens, GI217035152, Length=460, Percent_Identity=44.1304347826087, Blast_Score=345, Evalue=7e-95, Organism=Homo sapiens, GI217035148, Length=465, Percent_Identity=43.6559139784946, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI217035150, Length=465, Percent_Identity=42.1505376344086, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI50541956, Length=340, Percent_Identity=30.5882352941176, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI50541954, Length=340, Percent_Identity=30.5882352941176, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI50541952, Length=340, Percent_Identity=30.5882352941176, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI50541948, Length=340, Percent_Identity=30.5882352941176, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=33.4615384615385, Blast_Score=150, Evalue=4e-36, Organism=Escherichia coli, GI1788855, Length=495, Percent_Identity=51.9191919191919, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI1786293, Length=351, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994385, Length=485, Percent_Identity=37.319587628866, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI71994389, Length=436, Percent_Identity=37.6146788990826, Blast_Score=252, Evalue=5e-67, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=34.9019607843137, Blast_Score=157, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323585, Length=467, Percent_Identity=42.6124197002141, Blast_Score=355, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6322012, Length=467, Percent_Identity=40.6852248394004, Blast_Score=345, Evalue=8e-96, Organism=Saccharomyces cerevisiae, GI6323464, Length=505, Percent_Identity=40.990099009901, Blast_Score=342, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6319352, Length=344, Percent_Identity=39.5348837209302, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=44.5378151260504, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI24641071, Length=488, Percent_Identity=41.5983606557377, Blast_Score=335, Evalue=7e-92, Organism=Drosophila melanogaster, GI24641073, Length=488, Percent_Identity=41.5983606557377, Blast_Score=335, Evalue=7e-92, Organism=Drosophila melanogaster, GI28571163, Length=447, Percent_Identity=41.834451901566, Blast_Score=301, Evalue=9e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 62355; Mature: 62224
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLYDGVSPSPDRRAARSPACFTRLPGQTGSRRFPGAGLPRHRGDAPAGAGPMRTEGAM CCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGSPANPTTSITRATGEPDLDQSPVRHVADSLGAEGPALPPKLAMLGLTFDDVLLLPAAS CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHEEEECCHHHEEEECCCH EVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAMARQGGVGVLHRNLSVDDQAQ HCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH QVDMVKRSESGMITSPITCGPDATIEEANVLMARYRISGVPVTEPDGRLVGIVTNRDIRF HHHHHHHCCCCCEECCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCCEEEEEECCCEEE ERDYTRRVHEVMTRMPLITAPVGVSADDALALLRHNKVEKLPIVDGHDRLCGLITVKDFT CHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHH KREQYPRATKDADGRLVVGAAVGVGEDALKRAQVLVAAGVDFLVVDTAHGHHHAVPDMIA HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHH RIKAEMPAGVDGRPLDVIGGNIATAAGAAALIAAGADAVKVGVGPGSICTTRVVTGVGVP HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCC QVTAIYEAARAARAAGVPVIGDGGLQYSGDIAKAIAVGADTVMLGSLLAGVDESPGELIF HHHHHHHHHHHHHHCCCCEEECCCCEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEE INGKQYKSYRGMGSLGAMRSRGDTRSYSKDRYFQDDVLSDDKLVPQGVEGQVPYRGSLAG EECCCCHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHH MAHQLIGGLQAAMGYTGAATIRDLQENSQLVRITSAGLTESHAHDVQMTVEAPNYTR HHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure PGLYDGVSPSPDRRAARSPACFTRLPGQTGSRRFPGAGLPRHRGDAPAGAGPMRTEGAM CCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGSPANPTTSITRATGEPDLDQSPVRHVADSLGAEGPALPPKLAMLGLTFDDVLLLPAAS CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHEEEECCHHHEEEECCCH EVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAMARQGGVGVLHRNLSVDDQAQ HCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH QVDMVKRSESGMITSPITCGPDATIEEANVLMARYRISGVPVTEPDGRLVGIVTNRDIRF HHHHHHHCCCCCEECCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCCEEEEEECCCEEE ERDYTRRVHEVMTRMPLITAPVGVSADDALALLRHNKVEKLPIVDGHDRLCGLITVKDFT CHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHH KREQYPRATKDADGRLVVGAAVGVGEDALKRAQVLVAAGVDFLVVDTAHGHHHAVPDMIA HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHH RIKAEMPAGVDGRPLDVIGGNIATAAGAAALIAAGADAVKVGVGPGSICTTRVVTGVGVP HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCC QVTAIYEAARAARAAGVPVIGDGGLQYSGDIAKAIAVGADTVMLGSLLAGVDESPGELIF HHHHHHHHHHHHHHCCCCEEECCCCEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEE INGKQYKSYRGMGSLGAMRSRGDTRSYSKDRYFQDDVLSDDKLVPQGVEGQVPYRGSLAG EECCCCHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHH MAHQLIGGLQAAMGYTGAATIRDLQENSQLVRITSAGLTESHAHDVQMTVEAPNYTR HHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]