| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317738
Identifier: 158317738
GI number: 158317738
Start: 7313081
End: 7314448
Strand: Reverse
Name: 158317738
Synonym: Franean1_5996
Alternate gene names: NA
Gene position: 7314448-7313081 (Counterclockwise)
Preceding gene: 158317739
Following gene: 158317737
Centisome position: 81.43
GC content: 75.66
Gene sequence:
>1368_bases ATGCGCCTCGACGAGAACGGCCGCTGGGTCAGCGACGACGGCGCCTATGTCTGGGATGACGCGGCCCAGACCTGGCGGCT GGCGAATGCCACGTCGCCGTCCGCCATGCCCGCGACCGGCTCGGGCCGGACGGCCTCGGGCCAGACCGGTCCGGGCCACA CCGGTTCGGGCCAGGCGGGCCCGGGGCAGGCGGGCTCCGGCCAGACGGGTTGGACACCGCCGCACACGGGTCCGCTCGCC CCGAGCTCCGGCAGTTCCGCCGGCACCGGGGCGACCGGGCCGATCTACACCGGGCAGGCGTACGCGGGGCCGGCCGACAC AGGCTCCTCCTACGGCGGCCGCCCCGGCTCCGGCTACCCGGACCCGGCACGGTCAGATCCGGCACGGTCAGATCCGGCAT GGACGGGCCCGGTGCGGGCGGGCCAGGCGCCGGCCGCGCGGGAATCGGGCCGGCCCACAACGACCGGCCCGTTTTCGACC GGCCCGTTTCCAGCTGGGCAGCTTCAGAGCGGGCCGATGGCCACCGGGCCGATGCCGACGGGGCCGATGCCGACCGCCCG GACAGCCACGGGCGCGTCCGGGGGCCGGGCAGACTCCGCCGTGGCGCCGAGCGATCCTGCGGAGAACACGACGGGCATCC CTCGCCGGATGACGCGGCCGCGGCGGCCCCGGCCGGCCGGGCAGCTCGACGTGGCCGACACCGATCTCGACGACACCGAT CTTGACGACGCCGATCCCGACTACACCGACCTGGACGGCCCGCACTTGGACGACGCCGACCCGGACCGCTGGGCCGGTGA CGATGACGAGGATGAGGCGGGCCTCCGGGGCCGCGGTGCCAGGCCGGGCGACGGCCACGGCCCCGAGGGCGGGGGAGCGC GGCGGTTCGCCAGCGGGCTGCGGGCGTCCGCGCTGGATCCCCGGGCGCGCTGGGGCGCGGCGGGGCCGGGCGGGACGTCC GACAACGGCGGCGGGCCCGACGGCTACCCGGCGGCCGAGGACCCCGCCCGCGGGATCGCCGCGATGCTGCGCCGGCCGAC CGTGCTCGCGGTGGCCACGGCGTTCGCTCTGGTAGTCGCGCTCGGCGTGGCCGGGTTCCTCGTTCTCGGCGGGGGTGACG ACAGCGGTTCGACCGCCTCCGCGTCGTCCGCCGGGGTGGGCAGGTACGACGCGGCCGTCCGGAAGGACTACATCGACGCC TGCCTCGGCGTGAGCGACGGCAACGAGCGCTACTGCACCTGCACGCTGGAGAAACTCGAGGCTGACTACACCCAGGAGCA GTATCTGGCCTTCAACAGCGACGTCGAGTCCGACAACTCCCAGCGCATCGTGCGCGAGATTTACGCGGCCTGCCGCAATC TCCGGTGA
Upstream 100 bases:
>100_bases CCAGCGGTGTGCGTCGGTCGTGCTGCCGACCCGGACGCCTTGGGTGTAAGTCCGCCGTGGCACCCTTGGAGCCGTCCGTC TCCGGATCGAAGGATGACCG
Downstream 100 bases:
>100_bases GAGCCCCCGTGTACAGTGGGATGATCCCGTTTGCGACCGATTCGTGCTTTCCACCCGCAAGGGCAACGGCAACGGCGAGG CTGCCGTTGCGAACGGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MRLDENGRWVSDDGAYVWDDAAQTWRLANATSPSAMPATGSGRTASGQTGPGHTGSGQAGPGQAGSGQTGWTPPHTGPLA PSSGSSAGTGATGPIYTGQAYAGPADTGSSYGGRPGSGYPDPARSDPARSDPAWTGPVRAGQAPAARESGRPTTTGPFST GPFPAGQLQSGPMATGPMPTGPMPTARTATGASGGRADSAVAPSDPAENTTGIPRRMTRPRRPRPAGQLDVADTDLDDTD LDDADPDYTDLDGPHLDDADPDRWAGDDDEDEAGLRGRGARPGDGHGPEGGGARRFASGLRASALDPRARWGAAGPGGTS DNGGGPDGYPAAEDPARGIAAMLRRPTVLAVATAFALVVALGVAGFLVLGGGDDSGSTASASSAGVGRYDAAVRKDYIDA CLGVSDGNERYCTCTLEKLEADYTQEQYLAFNSDVESDNSQRIVREIYAACRNLR
Sequences:
>Translated_455_residues MRLDENGRWVSDDGAYVWDDAAQTWRLANATSPSAMPATGSGRTASGQTGPGHTGSGQAGPGQAGSGQTGWTPPHTGPLA PSSGSSAGTGATGPIYTGQAYAGPADTGSSYGGRPGSGYPDPARSDPARSDPAWTGPVRAGQAPAARESGRPTTTGPFST GPFPAGQLQSGPMATGPMPTGPMPTARTATGASGGRADSAVAPSDPAENTTGIPRRMTRPRRPRPAGQLDVADTDLDDTD LDDADPDYTDLDGPHLDDADPDRWAGDDDEDEAGLRGRGARPGDGHGPEGGGARRFASGLRASALDPRARWGAAGPGGTS DNGGGPDGYPAAEDPARGIAAMLRRPTVLAVATAFALVVALGVAGFLVLGGGDDSGSTASASSAGVGRYDAAVRKDYIDA CLGVSDGNERYCTCTLEKLEADYTQEQYLAFNSDVESDNSQRIVREIYAACRNLR >Mature_455_residues MRLDENGRWVSDDGAYVWDDAAQTWRLANATSPSAMPATGSGRTASGQTGPGHTGSGQAGPGQAGSGQTGWTPPHTGPLA PSSGSSAGTGATGPIYTGQAYAGPADTGSSYGGRPGSGYPDPARSDPARSDPAWTGPVRAGQAPAARESGRPTTTGPFST GPFPAGQLQSGPMATGPMPTGPMPTARTATGASGGRADSAVAPSDPAENTTGIPRRMTRPRRPRPAGQLDVADTDLDDTD LDDADPDYTDLDGPHLDDADPDRWAGDDDEDEAGLRGRGARPGDGHGPEGGGARRFASGLRASALDPRARWGAAGPGGTS DNGGGPDGYPAAEDPARGIAAMLRRPTVLAVATAFALVVALGVAGFLVLGGGDDSGSTASASSAGVGRYDAAVRKDYIDA CLGVSDGNERYCTCTLEKLEADYTQEQYLAFNSDVESDNSQRIVREIYAACRNLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46134; Mature: 46134
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDENGRWVSDDGAYVWDDAAQTWRLANATSPSAMPATGSGRTASGQTGPGHTGSGQAG CCCCCCCCEECCCCCEEECCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGQAGSGQTGWTPPHTGPLAPSSGSSAGTGATGPIYTGQAYAGPADTGSSYGGRPGSGYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPARSDPARSDPAWTGPVRAGQAPAARESGRPTTTGPFSTGPFPAGQLQSGPMATGPMPT CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPMPTARTATGASGGRADSAVAPSDPAENTTGIPRRMTRPRRPRPAGQLDVADTDLDDTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCC LDDADPDYTDLDGPHLDDADPDRWAGDDDEDEAGLRGRGARPGDGHGPEGGGARRFASGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RASALDPRARWGAAGPGGTSDNGGGPDGYPAAEDPARGIAAMLRRPTVLAVATAFALVVA HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LGVAGFLVLGGGDDSGSTASASSAGVGRYDAAVRKDYIDACLGVSDGNERYCTCTLEKLE HHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH ADYTQEQYLAFNSDVESDNSQRIVREIYAACRNLR HHHCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLDENGRWVSDDGAYVWDDAAQTWRLANATSPSAMPATGSGRTASGQTGPGHTGSGQAG CCCCCCCCEECCCCCEEECCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGQAGSGQTGWTPPHTGPLAPSSGSSAGTGATGPIYTGQAYAGPADTGSSYGGRPGSGYP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPARSDPARSDPAWTGPVRAGQAPAARESGRPTTTGPFSTGPFPAGQLQSGPMATGPMPT CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPMPTARTATGASGGRADSAVAPSDPAENTTGIPRRMTRPRRPRPAGQLDVADTDLDDTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCC LDDADPDYTDLDGPHLDDADPDRWAGDDDEDEAGLRGRGARPGDGHGPEGGGARRFASGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RASALDPRARWGAAGPGGTSDNGGGPDGYPAAEDPARGIAAMLRRPTVLAVATAFALVVA HHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LGVAGFLVLGGGDDSGSTASASSAGVGRYDAAVRKDYIDACLGVSDGNERYCTCTLEKLE HHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH ADYTQEQYLAFNSDVESDNSQRIVREIYAACRNLR HHHCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA