Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317736

Identifier: 158317736

GI number: 158317736

Start: 7307702

End: 7309222

Strand: Reverse

Name: 158317736

Synonym: Franean1_5994

Alternate gene names: NA

Gene position: 7309222-7307702 (Counterclockwise)

Preceding gene: 158317737

Following gene: 158317731

Centisome position: 81.38

GC content: 69.36

Gene sequence:

>1521_bases
ATGTTCTGGTCTGACCGTGTTGCGGGTACCAGGCGGCGGCAGGCCGCCCACGAGGTCTCGAACCACGGAGGCCGCGGCCT
CCTTCATCCGGTTCGGCCCGACCCGGTAACGGCGGCGCAGAGCTCTCCGGAGGCATCGGATTCCGTGGCCGCGGCGAGCT
CCCCGGTAGCGCGGGGCCCCCTGGGCCCGCGGGTGGAGACGCGGCCGGAGGGATGGCGCCTGGTGGATCGCCGCGGCCTG
CTGAAGGCCGCCGGGATGGCCGCCGTCGCGGCGCCCGCCACGAGCCTGCTGGCGGCCTGCGGGGGCGGTGGCTCCGGTGG
TTCCGGCGCACGCTCGGTGCGCATCGGCATGGTCAGCCCGCGCACGGGCTCGCTGCGGCTCTATTCCGAGGTCGACGCGC
ATGTCGTCGAGACAATGCGCACGATCTTCAAGGACGGCATCCGGGTCGGCCGGAGCACCCTGCCGGTGGAGATCTTCGTT
CGGGACGGCCAGTCCGACCGCAACCGGGCCGCGGCCGCCGCGACCGACCTCATCTTCACCGACCAGGTGGATGTCGTCCT
GGTCGGCGGCACCTCGGACAACGCCAACCCGGTGTCCGACGCGTGCGAGGCCAACGGCGTCCCGTGTATCTCCACCGAGG
CTCCGTGGGAGTCGTGGTTCTACGGGCGCGGCGGCAACGTCCAGGCGCCGTTCTCCTGGACCTACCACTTCTACTGGGGC
ATGGGCGACCTGCGGGGCGCCTACACGACCATGTGGGGGCAGCTGGACGTACCCCGCGTGGTCGCCCTGCTGCTTCCCAA
CGACCAGGACGGCGCCACCTTCTCCAACGGCGTGTTCGGCCTGCCCGCGCTGGCCCAGGCCGGCTTCCGGATACTTTCCG
ACGTCCCGCCCTATTCGGTCGGTGAACGTGACTTCAGCGCACAGATCCAGAAGATCATCGATAACGACGTGGAGATCGTC
GCGGGTATACCCAATCCGGACGACTTCGCCGCGTTCTGGCGGACGCTGAACGACCGGAACTACCTCCCGAAGGTCGTCAC
CATGTCGAAGGCGCTGTCCTTCGAGCGGGACGTGGAGAACCTCGGTGCGACCGCGAACGGTTTCACCACCGAGGTCAGCT
GGTCGCCGAAGCACCAGTTCCGCAGCTACCTCACGAACCGCACCGCGGAGGAGCTGGCCAGCGAGTACGTCGACCAGACG
GGACGGCCCTGGGCGCCGTCCCTGGGCTTCACCCACGCGCTGTACGAGGTGCTGGCCCAGGCGCTGGTGAACGTCGACTC
CATCGACAACGCGCGCGGCATCGCCGACGCCATCGCCCGGGTGAAGGCGAACACGATCGTGGGCACCGTCACCTTCGGCG
GGGCCCAGAACGTCCCCAAGAACGTGGGGAGCATCCCGCTGGTGGGTGGCCAGTGGCGTCAGCAGAACAACACCTTCAAC
CTGCGCGTCGTCGCCAACAACGGCAGCAACATCGCGCCCGACGGGCCGGTCGAGGACCTGCAGACGGTGCAGAACCGCTG
A

Upstream 100 bases:

>100_bases
GGCAAATGGTGTCGGAGAAGATCTGGCTCGCTTCCGCGGGGCGCGGTGTTGGTGGACCCGGTGAGATGGTTTTATTGGCC
ATGCGGCAGGATCGGGTGTC

Downstream 100 bases:

>100_bases
TCCGAGGTACGAAACAGGGCCGGGGCCGGGGCCGGGAACGGCGGCCCCGGCCCCCGGTGGCGGAAGCGGCGGTATCCGGA
GCCGGCAGCGGCGCGGACAG

Product: branched-chain amino acid ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MFWSDRVAGTRRRQAAHEVSNHGGRGLLHPVRPDPVTAAQSSPEASDSVAAASSPVARGPLGPRVETRPEGWRLVDRRGL
LKAAGMAAVAAPATSLLAACGGGGSGGSGARSVRIGMVSPRTGSLRLYSEVDAHVVETMRTIFKDGIRVGRSTLPVEIFV
RDGQSDRNRAAAAATDLIFTDQVDVVLVGGTSDNANPVSDACEANGVPCISTEAPWESWFYGRGGNVQAPFSWTYHFYWG
MGDLRGAYTTMWGQLDVPRVVALLLPNDQDGATFSNGVFGLPALAQAGFRILSDVPPYSVGERDFSAQIQKIIDNDVEIV
AGIPNPDDFAAFWRTLNDRNYLPKVVTMSKALSFERDVENLGATANGFTTEVSWSPKHQFRSYLTNRTAEELASEYVDQT
GRPWAPSLGFTHALYEVLAQALVNVDSIDNARGIADAIARVKANTIVGTVTFGGAQNVPKNVGSIPLVGGQWRQQNNTFN
LRVVANNGSNIAPDGPVEDLQTVQNR

Sequences:

>Translated_506_residues
MFWSDRVAGTRRRQAAHEVSNHGGRGLLHPVRPDPVTAAQSSPEASDSVAAASSPVARGPLGPRVETRPEGWRLVDRRGL
LKAAGMAAVAAPATSLLAACGGGGSGGSGARSVRIGMVSPRTGSLRLYSEVDAHVVETMRTIFKDGIRVGRSTLPVEIFV
RDGQSDRNRAAAAATDLIFTDQVDVVLVGGTSDNANPVSDACEANGVPCISTEAPWESWFYGRGGNVQAPFSWTYHFYWG
MGDLRGAYTTMWGQLDVPRVVALLLPNDQDGATFSNGVFGLPALAQAGFRILSDVPPYSVGERDFSAQIQKIIDNDVEIV
AGIPNPDDFAAFWRTLNDRNYLPKVVTMSKALSFERDVENLGATANGFTTEVSWSPKHQFRSYLTNRTAEELASEYVDQT
GRPWAPSLGFTHALYEVLAQALVNVDSIDNARGIADAIARVKANTIVGTVTFGGAQNVPKNVGSIPLVGGQWRQQNNTFN
LRVVANNGSNIAPDGPVEDLQTVQNR
>Mature_506_residues
MFWSDRVAGTRRRQAAHEVSNHGGRGLLHPVRPDPVTAAQSSPEASDSVAAASSPVARGPLGPRVETRPEGWRLVDRRGL
LKAAGMAAVAAPATSLLAACGGGGSGGSGARSVRIGMVSPRTGSLRLYSEVDAHVVETMRTIFKDGIRVGRSTLPVEIFV
RDGQSDRNRAAAAATDLIFTDQVDVVLVGGTSDNANPVSDACEANGVPCISTEAPWESWFYGRGGNVQAPFSWTYHFYWG
MGDLRGAYTTMWGQLDVPRVVALLLPNDQDGATFSNGVFGLPALAQAGFRILSDVPPYSVGERDFSAQIQKIIDNDVEIV
AGIPNPDDFAAFWRTLNDRNYLPKVVTMSKALSFERDVENLGATANGFTTEVSWSPKHQFRSYLTNRTAEELASEYVDQT
GRPWAPSLGFTHALYEVLAQALVNVDSIDNARGIADAIARVKANTIVGTVTFGGAQNVPKNVGSIPLVGGQWRQQNNTFN
LRVVANNGSNIAPDGPVEDLQTVQNR

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54206; Mature: 54206

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWSDRVAGTRRRQAAHEVSNHGGRGLLHPVRPDPVTAAQSSPEASDSVAAASSPVARGP
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
LGPRVETRPEGWRLVDRRGLLKAAGMAAVAAPATSLLAACGGGGSGGSGARSVRIGMVSP
CCCCCCCCCCCCEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
RTGSLRLYSEVDAHVVETMRTIFKDGIRVGRSTLPVEIFVRDGQSDRNRAAAAATDLIFT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHEEEE
DQVDVVLVGGTSDNANPVSDACEANGVPCISTEAPWESWFYGRGGNVQAPFSWTYHFYWG
CCCCEEEEECCCCCCCCHHHHHHCCCCCEECCCCCHHHCEECCCCCCCCCEEEEEEEEEC
MGDLRGAYTTMWGQLDVPRVVALLLPNDQDGATFSNGVFGLPALAQAGFRILSDVPPYSV
CHHHCHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GERDFSAQIQKIIDNDVEIVAGIPNPDDFAAFWRTLNDRNYLPKVVTMSKALSFERDVEN
CCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGATANGFTTEVSWSPKHQFRSYLTNRTAEELASEYVDQTGRPWAPSLGFTHALYEVLAQ
CCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ALVNVDSIDNARGIADAIARVKANTIVGTVTFGGAQNVPKNVGSIPLVGGQWRQQNNTFN
HHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCEE
LRVVANNGSNIAPDGPVEDLQTVQNR
EEEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFWSDRVAGTRRRQAAHEVSNHGGRGLLHPVRPDPVTAAQSSPEASDSVAAASSPVARGP
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
LGPRVETRPEGWRLVDRRGLLKAAGMAAVAAPATSLLAACGGGGSGGSGARSVRIGMVSP
CCCCCCCCCCCCEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
RTGSLRLYSEVDAHVVETMRTIFKDGIRVGRSTLPVEIFVRDGQSDRNRAAAAATDLIFT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHEEEE
DQVDVVLVGGTSDNANPVSDACEANGVPCISTEAPWESWFYGRGGNVQAPFSWTYHFYWG
CCCCEEEEECCCCCCCCHHHHHHCCCCCEECCCCCHHHCEECCCCCCCCCEEEEEEEEEC
MGDLRGAYTTMWGQLDVPRVVALLLPNDQDGATFSNGVFGLPALAQAGFRILSDVPPYSV
CHHHCHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GERDFSAQIQKIIDNDVEIVAGIPNPDDFAAFWRTLNDRNYLPKVVTMSKALSFERDVEN
CCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGATANGFTTEVSWSPKHQFRSYLTNRTAEELASEYVDQTGRPWAPSLGFTHALYEVLAQ
CCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ALVNVDSIDNARGIADAIARVKANTIVGTVTFGGAQNVPKNVGSIPLVGGQWRQQNNTFN
HHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCEE
LRVVANNGSNIAPDGPVEDLQTVQNR
EEEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA