| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317713
Identifier: 158317713
GI number: 158317713
Start: 7275399
End: 7276379
Strand: Reverse
Name: 158317713
Synonym: Franean1_5971
Alternate gene names: NA
Gene position: 7276379-7275399 (Counterclockwise)
Preceding gene: 158317716
Following gene: 158317712
Centisome position: 81.01
GC content: 77.88
Gene sequence:
>981_bases GTGACCGAGACGGTCCCGGGTGCGTGGGGTCGGCCTGATCGGGAGCGTGGCGCGCGCGCCGGCGGCGCCCGGCGGGCCGA GGGACGGCACTCCGAGTGGCCTTCCGAGATCCAGGCCGGGGAACCGTCCGAACCGGACTCCGGGCGGTGGCGCTCCGAGG AGGCGGCCAACCCCGGCTCCGAGCGGGACACCGGGCAGTGGCCCCCGCCCGCGTGGCCACCGCAGGCGTGGCGCCCGGAG CCCGCGGTCCCGCGGCGCGGCCGCCCGGACCACGAGCGCCCGGACCACGAGCGGCCGGACCACGGATGGCCGGACCACGG ATGGCCGGAGCGTGGGCGACCGGACCATGGCAGGCCAGGGCGCGGCCGCCAGGCCGGCGAGCGACCGGGCCGTGAAGGGC CGGGCTGGGGACGTCCGGCGGACGGCGGCGCGGACCGGGGCTCGGACCGGCGGCAGCGGCGGGAGCCCTCGCAGGGCTGG CCGCCGCCGGGAGAGGGCCCGCCGGCGGGCCCATGGGCGCAGCCGCACCACACCGACGGCCCCGGCGTCGCGGACCATCG CCTCGACCACTCACGTGCTGGCGATCCGCTCACTGAACGTCAGCTCGCCAGTTCCGCTGATCCCGCGGGTGCCGAAGGCC GGCCCGTCCCTGAGCCGGGAGCCGGTGGTGGCGCGGGCCGGCCGTCCCGCCGCCGGTCGGCGGGATCGGCGACCGGCGGC CGCCTCGGCCGGATCGTCTTCGGCGGCATCCTCGGCGGTGTCGCGCTGGGCCTGCTCTTCGTCTCACAGGACTACTGGCG GCGGGGGTTGCTCACCGCGGGCGGTGTCCTTCTTGTGGCCGCCCTACTGCGGCTGTGCCTTCCCACCCGGCAGGTGGGGA TGCTCGCCGTGCGGGGCCGGGTCTTCGACACCGTGACCCTCGTCGTGCTGGGCACGGCTGTGATCGTGCTCACCTCCACC GTGCCGTACAGCGGTGGCTGA
Upstream 100 bases:
>100_bases GGCTGCCCGCCGGGTGACGGCCGGCGCCTACTGTGTGGCCTCAGTAGCCCGCGCGCGGGGGATACGCGCGCGGGGGCGGG CCTGAGGAGGCGGAGAGCAG
Downstream 100 bases:
>100_bases CCCGACCCGTCCACCGAAAGCGGCTGTTGGGGTCACGGTCTGGCACGACGCCGCCGGCGAACGCCGTGCGCGGCTGCGCA CGGCCGGCCCGAGCGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTETVPGAWGRPDRERGARAGGARRAEGRHSEWPSEIQAGEPSEPDSGRWRSEEAANPGSERDTGQWPPPAWPPQAWRPE PAVPRRGRPDHERPDHERPDHGWPDHGWPERGRPDHGRPGRGRQAGERPGREGPGWGRPADGGADRGSDRRQRREPSQGW PPPGEGPPAGPWAQPHHTDGPGVADHRLDHSRAGDPLTERQLASSADPAGAEGRPVPEPGAGGGAGRPSRRRSAGSATGG RLGRIVFGGILGGVALGLLFVSQDYWRRGLLTAGGVLLVAALLRLCLPTRQVGMLAVRGRVFDTVTLVVLGTAVIVLTST VPYSGG
Sequences:
>Translated_326_residues MTETVPGAWGRPDRERGARAGGARRAEGRHSEWPSEIQAGEPSEPDSGRWRSEEAANPGSERDTGQWPPPAWPPQAWRPE PAVPRRGRPDHERPDHERPDHGWPDHGWPERGRPDHGRPGRGRQAGERPGREGPGWGRPADGGADRGSDRRQRREPSQGW PPPGEGPPAGPWAQPHHTDGPGVADHRLDHSRAGDPLTERQLASSADPAGAEGRPVPEPGAGGGAGRPSRRRSAGSATGG RLGRIVFGGILGGVALGLLFVSQDYWRRGLLTAGGVLLVAALLRLCLPTRQVGMLAVRGRVFDTVTLVVLGTAVIVLTST VPYSGG >Mature_325_residues TETVPGAWGRPDRERGARAGGARRAEGRHSEWPSEIQAGEPSEPDSGRWRSEEAANPGSERDTGQWPPPAWPPQAWRPEP AVPRRGRPDHERPDHERPDHGWPDHGWPERGRPDHGRPGRGRQAGERPGREGPGWGRPADGGADRGSDRRQRREPSQGWP PPGEGPPAGPWAQPHHTDGPGVADHRLDHSRAGDPLTERQLASSADPAGAEGRPVPEPGAGGGAGRPSRRRSAGSATGGR LGRIVFGGILGGVALGLLFVSQDYWRRGLLTAGGVLLVAALLRLCLPTRQVGMLAVRGRVFDTVTLVVLGTAVIVLTSTV PYSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34711; Mature: 34580
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETVPGAWGRPDRERGARAGGARRAEGRHSEWPSEIQAGEPSEPDSGRWRSEEAANPGS CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCC ERDTGQWPPPAWPPQAWRPEPAVPRRGRPDHERPDHERPDHGWPDHGWPERGRPDHGRPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGRQAGERPGREGPGWGRPADGGADRGSDRRQRREPSQGWPPPGEGPPAGPWAQPHHTDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PGVADHRLDHSRAGDPLTERQLASSADPAGAEGRPVPEPGAGGGAGRPSRRRSAGSATGG CCHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC RLGRIVFGGILGGVALGLLFVSQDYWRRGLLTAGGVLLVAALLRLCLPTRQVGMLAVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VFDTVTLVVLGTAVIVLTSTVPYSGG HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TETVPGAWGRPDRERGARAGGARRAEGRHSEWPSEIQAGEPSEPDSGRWRSEEAANPGS CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCC ERDTGQWPPPAWPPQAWRPEPAVPRRGRPDHERPDHERPDHGWPDHGWPERGRPDHGRPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGRQAGERPGREGPGWGRPADGGADRGSDRRQRREPSQGWPPPGEGPPAGPWAQPHHTDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PGVADHRLDHSRAGDPLTERQLASSADPAGAEGRPVPEPGAGGGAGRPSRRRSAGSATGG CCHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC RLGRIVFGGILGGVALGLLFVSQDYWRRGLLTAGGVLLVAALLRLCLPTRQVGMLAVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VFDTVTLVVLGTAVIVLTSTVPYSGG HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA