| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317705
Identifier: 158317705
GI number: 158317705
Start: 7265732
End: 7265965
Strand: Reverse
Name: 158317705
Synonym: Franean1_5963
Alternate gene names: NA
Gene position: 7265965-7265732 (Counterclockwise)
Preceding gene: 158317708
Following gene: 158317703
Centisome position: 80.89
GC content: 71.79
Gene sequence:
>234_bases TTGCCCCTGGCGCGGCCGGGCCGCCACCCGGGCAACTGTGCGCCTCCCGCCGCCCGCCGCGCTACGGCCGGCTTCGACGA GATCGCGGCCCAGTGGCTCCCGCTCACCTACGCCCTCAACGCGGTCAACCGCAGCATGGGCTTCGATGATCTCTACCCGT TCGTCCTGACGTCCACCGTGCTGGACAAGCTGAGCTTCGTCCACGACCTCGCGACGGCCCGCGCCACGCGGTGA
Upstream 100 bases:
>100_bases ACCCCGGGCGGAGACCGGTCCGTCCCGGCCGAGCCACAGCAGCCACGGTACCGGCGGTGCGGCAACATGGAACTCGCCGG CTGCAACTGGCTCGTCGAGC
Downstream 100 bases:
>100_bases CGGCCGCGCCGTCGTTACGGCCGCATGGACGTGACGGCCCTCGTCGGCGGGCCGGCCACCGCGGTGACACTCGGGTCAGC GGCTGGCCCGGCCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPLARPGRHPGNCAPPAARRATAGFDEIAAQWLPLTYALNAVNRSMGFDDLYPFVLTSTVLDKLSFVHDLATARATR
Sequences:
>Translated_77_residues MPLARPGRHPGNCAPPAARRATAGFDEIAAQWLPLTYALNAVNRSMGFDDLYPFVLTSTVLDKLSFVHDLATARATR >Mature_76_residues PLARPGRHPGNCAPPAARRATAGFDEIAAQWLPLTYALNAVNRSMGFDDLYPFVLTSTVLDKLSFVHDLATARATR
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 8384; Mature: 8252
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLARPGRHPGNCAPPAARRATAGFDEIAAQWLPLTYALNAVNRSMGFDDLYPFVLTSTV CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDKLSFVHDLATARATR HHHHHHHHHHHHHHCCC >Mature Secondary Structure PLARPGRHPGNCAPPAARRATAGFDEIAAQWLPLTYALNAVNRSMGFDDLYPFVLTSTV CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDKLSFVHDLATARATR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]