| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317576
Identifier: 158317576
GI number: 158317576
Start: 7075137
End: 7076459
Strand: Reverse
Name: 158317576
Synonym: Franean1_5832
Alternate gene names: NA
Gene position: 7076459-7075137 (Counterclockwise)
Preceding gene: 158317577
Following gene: 158317575
Centisome position: 78.78
GC content: 76.49
Gene sequence:
>1323_bases GTGAGCCTGCCGATCCTGACCGCCGTCACCGACTCGGTGGTCGAGGCCGGCCTCGTCTCGGCGTTCGACCGTCGTGATCT CGGTGTGACGGTCGTCCGCCGGTGTGTCGACCTGCCCGATCTGCTCGCCGCCGCGACGACCGGGGCCGCCCGGGCCGCCC TGCTGTCGGCCGATCTGCGCCGCCTCGACAGGGACGCCCTGGTGCGGCTGGCGGCGTCCGGTGTGGCCGTCGTGGGCCTG ATCGCGCCGGGGGACGAGGACGCCGACCGCCGGCTGCGCCAGCTCGGCGTCGTCGCGGTGATCCCGGCGGACGCGACCGC GGAGGCGGTGGCGGGTGCGGTCGTGGAGGCGTCGCGCGCGCTGGCCGACCTCGCCGGTCCGCCCGCGCTGCCCGCGGCGT TCAGCGAGCCGCTGATGGGTTTCGACCCACTCGCCCCGGCGGTGCCGGCGGCCGACCAGACCGAGGCCGGCGAGCCCGGT GAGGGCCGGGTGCTCGCGGTCTGGGGGCCGGTGGGCTCGCCGGGGCGCACGACGATCGCGCTGGGCCTGGCCGCCGAGCT CGCCGCTCTCGGCACCCCGACCCTGCTCATCGACGCGGATTCGTACGGCGGCTCGGTCGGCCAGCACGTCGGGCTGCTCG AGGAGGCGCCGGGCCTCGCGGCAGCCGCGCGCTCGGCGAACCAGGGCCTGCTGGACGTCCCTCGCCTGGCGGTGCTGTGT CGGGATCTCGGCGGCGGTCTGCGGGTGCTGCCGGGTATCTCGCGGCCGTCCCGCTGGCCGGAGCTGCGTCCCGCCTCCAT CGAGACGGTGCTGGCGCTGTCGCGCCGGCTCGCGTCGTTCGTGATCGTCGACTGCGGCTTCTGCCTGGAGACGGACGAGG AGCTGTCGTTCGACACGGCCGCGCCGCGGCGCAACGGCGCCACACTGGCCGTGCTCGGCGCGGCCGACTCGGTGCTCGCC GTCGCGTCCGCGGAGCCGGTCGGGCTGGTTCGCTTCGTCCGTGGGCTGTCGGAGCTGCGGGAGGTGGTTCCGCACGTCGA TCCGCTGATCGTGGTCAACAAGCTGCGGGGCTCGGTGGTGGGCGGTGACCCGCGTCGTGAGGTGTCGCGGGCGATGGCCC GGCACACCGGCCGCGAGCCGGTGGCGCTCGTCCCCTACGATCTGGCGGGCCTGGACGCGGCAGCCGCGTCCGGTCAGCTC CTGCGCGACATCGCCCCGGCATCGCCGGCCCGGCTTGCGGTGCGGGATCTGGCCGCGCTCCTGGCAGGGGTGTCCGGTTC GGGGCGGCGCCGGCGCTCCGCGCTGCGCCGCGCTCAGCGCTGA
Upstream 100 bases:
>100_bases CGGCGTCGCAGAGCGAGCGGGTCGACGTCGTGAAGCTGGAGCGGGACGCCCGCGGCGAGGTCGGATCGGGCGGCCCGTCC TCCGCTCCGGGGTACGGTCG
Downstream 100 bases:
>100_bases CCGCCCAGCCCGGTGTGCCTCAGGCCCGGACCACTCGGCCCCGCCCGGCTCCTCGCGTGTCGTCCCGACACGCCCCGACG CGCCGGCCGTGGGCGGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Regulator; ATPase Involved In Chromosome Partitioning Family Protein; Flp Pilus Assembly Protein ATPase CpaE; ATPase Involved In Chromosome Partitioning-Like Protein; ATPase Family Protein Involved In Chromosome Partitioning; ATPases Involved In Chromosome Partitioning-Like; Chromosome Partitioning ATPase-Like Protein; Septum Formation Inhibitor-Activating ATPase; Chromosome Partitioning ATPase Protein-Like Protein
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSLPILTAVTDSVVEAGLVSAFDRRDLGVTVVRRCVDLPDLLAAATTGAARAALLSADLRRLDRDALVRLAASGVAVVGL IAPGDEDADRRLRQLGVVAVIPADATAEAVAGAVVEASRALADLAGPPALPAAFSEPLMGFDPLAPAVPAADQTEAGEPG EGRVLAVWGPVGSPGRTTIALGLAAELAALGTPTLLIDADSYGGSVGQHVGLLEEAPGLAAAARSANQGLLDVPRLAVLC RDLGGGLRVLPGISRPSRWPELRPASIETVLALSRRLASFVIVDCGFCLETDEELSFDTAAPRRNGATLAVLGAADSVLA VASAEPVGLVRFVRGLSELREVVPHVDPLIVVNKLRGSVVGGDPRREVSRAMARHTGREPVALVPYDLAGLDAAAASGQL LRDIAPASPARLAVRDLAALLAGVSGSGRRRRSALRRAQR
Sequences:
>Translated_440_residues MSLPILTAVTDSVVEAGLVSAFDRRDLGVTVVRRCVDLPDLLAAATTGAARAALLSADLRRLDRDALVRLAASGVAVVGL IAPGDEDADRRLRQLGVVAVIPADATAEAVAGAVVEASRALADLAGPPALPAAFSEPLMGFDPLAPAVPAADQTEAGEPG EGRVLAVWGPVGSPGRTTIALGLAAELAALGTPTLLIDADSYGGSVGQHVGLLEEAPGLAAAARSANQGLLDVPRLAVLC RDLGGGLRVLPGISRPSRWPELRPASIETVLALSRRLASFVIVDCGFCLETDEELSFDTAAPRRNGATLAVLGAADSVLA VASAEPVGLVRFVRGLSELREVVPHVDPLIVVNKLRGSVVGGDPRREVSRAMARHTGREPVALVPYDLAGLDAAAASGQL LRDIAPASPARLAVRDLAALLAGVSGSGRRRRSALRRAQR >Mature_439_residues SLPILTAVTDSVVEAGLVSAFDRRDLGVTVVRRCVDLPDLLAAATTGAARAALLSADLRRLDRDALVRLAASGVAVVGLI APGDEDADRRLRQLGVVAVIPADATAEAVAGAVVEASRALADLAGPPALPAAFSEPLMGFDPLAPAVPAADQTEAGEPGE GRVLAVWGPVGSPGRTTIALGLAAELAALGTPTLLIDADSYGGSVGQHVGLLEEAPGLAAAARSANQGLLDVPRLAVLCR DLGGGLRVLPGISRPSRWPELRPASIETVLALSRRLASFVIVDCGFCLETDEELSFDTAAPRRNGATLAVLGAADSVLAV ASAEPVGLVRFVRGLSELREVVPHVDPLIVVNKLRGSVVGGDPRREVSRAMARHTGREPVALVPYDLAGLDAAAASGQLL RDIAPASPARLAVRDLAALLAGVSGSGRRRRSALRRAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45081; Mature: 44950
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPILTAVTDSVVEAGLVSAFDRRDLGVTVVRRCVDLPDLLAAATTGAARAALLSADLR CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH RLDRDALVRLAASGVAVVGLIAPGDEDADRRLRQLGVVAVIPADATAEAVAGAVVEASRA HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH LADLAGPPALPAAFSEPLMGFDPLAPAVPAADQTEAGEPGEGRVLAVWGPVGSPGRTTIA HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE LGLAAELAALGTPTLLIDADSYGGSVGQHVGLLEEAPGLAAAARSANQGLLDVPRLAVLC HHHHHHHHHCCCCEEEEECCCCCCCHHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHH RDLGGGLRVLPGISRPSRWPELRPASIETVLALSRRLASFVIVDCGFCLETDEELSFDTA HHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC APRRNGATLAVLGAADSVLAVASAEPVGLVRFVRGLSELREVVPHVDPLIVVNKLRGSVV CCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCC GGDPRREVSRAMARHTGREPVALVPYDLAGLDAAAASGQLLRDIAPASPARLAVRDLAAL CCCHHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHCHHHHHHHCCCCHHHHHHHHHHHH LAGVSGSGRRRRSALRRAQR HHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SLPILTAVTDSVVEAGLVSAFDRRDLGVTVVRRCVDLPDLLAAATTGAARAALLSADLR CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHH RLDRDALVRLAASGVAVVGLIAPGDEDADRRLRQLGVVAVIPADATAEAVAGAVVEASRA HHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH LADLAGPPALPAAFSEPLMGFDPLAPAVPAADQTEAGEPGEGRVLAVWGPVGSPGRTTIA HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE LGLAAELAALGTPTLLIDADSYGGSVGQHVGLLEEAPGLAAAARSANQGLLDVPRLAVLC HHHHHHHHHCCCCEEEEECCCCCCCHHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHH RDLGGGLRVLPGISRPSRWPELRPASIETVLALSRRLASFVIVDCGFCLETDEELSFDTA HHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC APRRNGATLAVLGAADSVLAVASAEPVGLVRFVRGLSELREVVPHVDPLIVVNKLRGSVV CCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCC GGDPRREVSRAMARHTGREPVALVPYDLAGLDAAAASGQLLRDIAPASPARLAVRDLAAL CCCHHHHHHHHHHHHCCCCCEEEECCCHHCCCHHHHCHHHHHHHCCCCHHHHHHHHHHHH LAGVSGSGRRRRSALRRAQR HHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA