Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317566

Identifier: 158317566

GI number: 158317566

Start: 7063752

End: 7064210

Strand: Reverse

Name: 158317566

Synonym: Franean1_5822

Alternate gene names: NA

Gene position: 7064210-7063752 (Counterclockwise)

Preceding gene: 158317567

Following gene: 158317565

Centisome position: 78.65

GC content: 72.77

Gene sequence:

>459_bases
GTGCGCAGGTGGCCGCCACGGTTCCCGTGGCGCTGGGGCGGGCCGGCCGTCCCGGACGTCCCCGCGGATCGGGTTACCGG
TGATGGTGACAGTGGGTCCGCGATCGTCGAGTTCGTCCTGGTCGGGACGCTGCTGCTGATGCTCATCCTGGGCGTCATCC
AGGTCGGGCTGGTCCTGCACGTGCGCAACACCCTGGCCGCGGACGCCGCCGAGGGCGCGCGCCACGCCGCCAACCTGGAG
GTACCGGCGAGCGAGGGCGGAACCTACGCCCAGCGGCTCATCGCCGAGACGCTCCCCGGCCGCGCGGACACCGTCTGCAC
GGGGCAGGACGAGACCGGCCCCGGTGACATCCCCCTGGTCCAGGTGACCTGCACGGTCGTGGTGCCGCTCAGCCTCGTCC
CACTCGGCGACGGCGTCACCGTGACGGTGACCGGTCACGCGGTGAAGGAGACTCCGTGA

Upstream 100 bases:

>100_bases
GGTCGCGATCGCCACCCTGGCGACGCCGGCCCTGCAGACGCTGTTCACCTCGGCCATCGAACAGGTGACCGGCATCGCCG
GCGACTGAACGATCGCGGCT

Downstream 100 bases:

>100_bases
CGGCCCCACCGACCACTCCTGGTACGGACGCCGCGGAGCCCGCCGACCGTGACCAGGGATCGGCGATGATCGAATTCGTG
GGGCTCTCGATCGTGCTTCT

Product: TadE family protein

Products: NA

Alternate protein names: TadE-Like Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRRWPPRFPWRWGGPAVPDVPADRVTGDGDSGSAIVEFVLVGTLLLMLILGVIQVGLVLHVRNTLAADAAEGARHAANLE
VPASEGGTYAQRLIAETLPGRADTVCTGQDETGPGDIPLVQVTCTVVVPLSLVPLGDGVTVTVTGHAVKETP

Sequences:

>Translated_152_residues
MRRWPPRFPWRWGGPAVPDVPADRVTGDGDSGSAIVEFVLVGTLLLMLILGVIQVGLVLHVRNTLAADAAEGARHAANLE
VPASEGGTYAQRLIAETLPGRADTVCTGQDETGPGDIPLVQVTCTVVVPLSLVPLGDGVTVTVTGHAVKETP
>Mature_152_residues
MRRWPPRFPWRWGGPAVPDVPADRVTGDGDSGSAIVEFVLVGTLLLMLILGVIQVGLVLHVRNTLAADAAEGARHAANLE
VPASEGGTYAQRLIAETLPGRADTVCTGQDETGPGDIPLVQVTCTVVVPLSLVPLGDGVTVTVTGHAVKETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15805; Mature: 15805

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWPPRFPWRWGGPAVPDVPADRVTGDGDSGSAIVEFVLVGTLLLMLILGVIQVGLVLH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNTLAADAAEGARHAANLEVPASEGGTYAQRLIAETLPGRADTVCTGQDETGPGDIPLV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEE
QVTCTVVVPLSLVPLGDGVTVTVTGHAVKETP
EEEEEEEEEEEEEECCCCEEEEEECCEECCCC
>Mature Secondary Structure
MRRWPPRFPWRWGGPAVPDVPADRVTGDGDSGSAIVEFVLVGTLLLMLILGVIQVGLVLH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNTLAADAAEGARHAANLEVPASEGGTYAQRLIAETLPGRADTVCTGQDETGPGDIPLV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEE
QVTCTVVVPLSLVPLGDGVTVTVTGHAVKETP
EEEEEEEEEEEEEECCCCEEEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA