Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317497

Identifier: 158317497

GI number: 158317497

Start: 6986305

End: 6987168

Strand: Reverse

Name: 158317497

Synonym: Franean1_5749

Alternate gene names: NA

Gene position: 6987168-6986305 (Counterclockwise)

Preceding gene: 158317498

Following gene: 158317489

Centisome position: 77.79

GC content: 63.89

Gene sequence:

>864_bases
GTGGCCATCATCGATACGCGGACCGGCGTGGGTCCGTTGGTTCGTGACTGGCGTCGTCGAAAAAATCTTAGCCAGTCGGA
GTTGGCCTTGCGGTCAGGAACTTCGGCTCGGCACCTGAGCTTCGTCGAAACCGGGCGTTCGAGCCCGAGTCGGGGGCTAC
TCCTCAGGCTCGCGGAGCAGCTCGAAATTCCGCTTCGACAGCGCAATACGCTGCTTGTTTCGGCGGGCTACTCACCGACG
TACCACGAAACGCCGCTCGAAGCTCCCAGATTGAAGATCGTCAAGGAGGCTGTCGACCGGTTGCTCGCCGCCCACGACCC
GTACCCGGCGTTGGCCGTCGACGTGGACGAGAACGTGGTAGCCATGAATCTCGGTACCAAGCTGCTGCTACGCGAAGTGT
CGCCGACGCTGCTCGTGCCGCCGGTCAATGTGATGCGCGTGTGCTTGCACCCCGAAGGATTGTCCCAGCAGGTAGTCAAC
GGCAAGGAATGGCGTAGCCACCTCGTCGGTCGGCTCTACCGCCAGGCGATCTATTCAGGCCGAGAAAGCCTGCGTGAACT
CTACGACGAGGTTTCGCAGTACGCGCCGCGGGGCGGTGGCAGCTGCGAAGGCTTGGCAGACTCGATCGTGGCCTCGATTC
GGATCCGCGGGCTCGGCACGGAGCTGCAACTGTTCAGTACCATCACCACGTTCGGTGCGGCGACCGACATCACGGTCTCG
GAACTTTCCCTGGAAACCATGCACCCGGCCGACGAGCAGACGGCCGAGGCGTTCCAGGCCGCTGCCGCGCAGGTCAAGGA
GCGATCGTTGTCGGGCGTCGACGGGCCGCGGCTGACCTTTCGCCGGCCCGATCGCCCTAGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCGCTGCGACAGGTTCGGACGGAAGGTCGCAAACGGGCAGAATCGAAACTTTCGTTCCGAGCTTGCTTCGTTTGG
GCGATGCTATACTCGACCCA

Downstream 100 bases:

>100_bases
CTGAACCTTTCCCGGCAACCATTCGTCACCTTGCGTAGCAACAGTTCCGTGTTGCGGTGTTGGGGTTCAGGCGGTCCTGC
GGTGCTCGGTGTGGAGGATG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAIIDTRTGVGPLVRDWRRRKNLSQSELALRSGTSARHLSFVETGRSSPSRGLLLRLAEQLEIPLRQRNTLLVSAGYSPT
YHETPLEAPRLKIVKEAVDRLLAAHDPYPALAVDVDENVVAMNLGTKLLLREVSPTLLVPPVNVMRVCLHPEGLSQQVVN
GKEWRSHLVGRLYRQAIYSGRESLRELYDEVSQYAPRGGGSCEGLADSIVASIRIRGLGTELQLFSTITTFGAATDITVS
ELSLETMHPADEQTAEAFQAAAAQVKERSLSGVDGPRLTFRRPDRPS

Sequences:

>Translated_287_residues
MAIIDTRTGVGPLVRDWRRRKNLSQSELALRSGTSARHLSFVETGRSSPSRGLLLRLAEQLEIPLRQRNTLLVSAGYSPT
YHETPLEAPRLKIVKEAVDRLLAAHDPYPALAVDVDENVVAMNLGTKLLLREVSPTLLVPPVNVMRVCLHPEGLSQQVVN
GKEWRSHLVGRLYRQAIYSGRESLRELYDEVSQYAPRGGGSCEGLADSIVASIRIRGLGTELQLFSTITTFGAATDITVS
ELSLETMHPADEQTAEAFQAAAAQVKERSLSGVDGPRLTFRRPDRPS
>Mature_286_residues
AIIDTRTGVGPLVRDWRRRKNLSQSELALRSGTSARHLSFVETGRSSPSRGLLLRLAEQLEIPLRQRNTLLVSAGYSPTY
HETPLEAPRLKIVKEAVDRLLAAHDPYPALAVDVDENVVAMNLGTKLLLREVSPTLLVPPVNVMRVCLHPEGLSQQVVNG
KEWRSHLVGRLYRQAIYSGRESLRELYDEVSQYAPRGGGSCEGLADSIVASIRIRGLGTELQLFSTITTFGAATDITVSE
LSLETMHPADEQTAEAFQAAAAQVKERSLSGVDGPRLTFRRPDRPS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31585; Mature: 31454

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIDTRTGVGPLVRDWRRRKNLSQSELALRSGTSARHLSFVETGRSSPSRGLLLRLAEQ
CEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LEIPLRQRNTLLVSAGYSPTYHETPLEAPRLKIVKEAVDRLLAAHDPYPALAVDVDENVV
HCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEE
AMNLGTKLLLREVSPTLLVPPVNVMRVCLHPEGLSQQVVNGKEWRSHLVGRLYRQAIYSG
EEECCHHHHHHHCCCCEEECCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
RESLRELYDEVSQYAPRGGGSCEGLADSIVASIRIRGLGTELQLFSTITTFGAATDITVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH
ELSLETMHPADEQTAEAFQAAAAQVKERSLSGVDGPRLTFRRPDRPS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AIIDTRTGVGPLVRDWRRRKNLSQSELALRSGTSARHLSFVETGRSSPSRGLLLRLAEQ
EEECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LEIPLRQRNTLLVSAGYSPTYHETPLEAPRLKIVKEAVDRLLAAHDPYPALAVDVDENVV
HCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEE
AMNLGTKLLLREVSPTLLVPPVNVMRVCLHPEGLSQQVVNGKEWRSHLVGRLYRQAIYSG
EEECCHHHHHHHCCCCEEECCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
RESLRELYDEVSQYAPRGGGSCEGLADSIVASIRIRGLGTELQLFSTITTFGAATDITVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH
ELSLETMHPADEQTAEAFQAAAAQVKERSLSGVDGPRLTFRRPDRPS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA