| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317486
Identifier: 158317486
GI number: 158317486
Start: 6972538
End: 6973467
Strand: Direct
Name: 158317486
Synonym: Franean1_5738
Alternate gene names: NA
Gene position: 6972538-6973467 (Clockwise)
Preceding gene: 158317485
Following gene: 158317490
Centisome position: 77.63
GC content: 66.77
Gene sequence:
>930_bases ATGATCTTTGGTGTTCTCGCGGTGTACGCGGCCCTCGTCGCCTACGGTCTGCCCTACGCCCTCCGCGCTGCTTCCTGGAC GTCCCGTGCGCCGCGGCTCGCCGTCGCCATGTGGCTGGCCGCGATGATCTCCGTGGTCTCCGTGGCGGTACTGGCCGCAA CGCTCCTGTTCATACCGCTGCACGCGATCGGGGACACGCTGGTTCTGCTTGTCCAGTGGTGCGGTTGGACCAACCACAAC CTGACGATCTCCATCCACTGGACGACTCCACGAGTTGCCGGCGTCGTCCTGAGCGCCGCTGCGGCGCTCCGCCTCCTTCA CGTCGCCGTCGCCGTCACCGTCGCCGGCCGTCGATCGCGCGTCCGTCATCGGCATGACGTCCGATTGCTCGGGCGCTTTC ATCCCACACTTCGGATCTACATACTGGATCATGCTGATCGCAGTGCGTTCTGCCTACCGGGCCGGAGCGGGGGCGTCGTC ATCACCGAAGGCGCGCTGCAAGCGTTGCCTCCCACCGAACTCGACGCCGTCATCGCGCATGAACGCGCCCATCTCGCCGG CAGGCACCACCTCATCCTCACGACGGCAGCCGTGCTGGCCGGAGCGTTCCCAGCCGTGTCGCTCTTCGGGACAGGACAGG AGGAGCTACGCCGACTCGTCGAGCTCACCGCTGACGACAGCGCGGCCCGGCGCAGCGCTCCCCACGTCGTCGCCGAAGCA GTGCTACGGCTCGCGGCTCCCCCAGCATCCGTGCTGGGTATGGCGAACACCGGCGTACGGCAACGGATACTGCGTCTACT GACCGCGGAGCCGCCCCTGTCCCGCTCCGCCGTCGTCGCTCGCAGCCTAATCGTCGCCGTGCTGCTGCTCCTACCACTCG TTATGACCACGGTTCCCGCTTTGAATGATCTCGGATATCACTGCGCCTGA
Upstream 100 bases:
>100_bases TCGTGCACGCCATGGATGCTGCGGAGTACGAGACGTTGCGCGAAGCGGTGCAGTGGCACTCCGCCAGCCGCGGTCGCGAC GATGAGGAACCCACCTCGCC
Downstream 100 bases:
>100_bases TCGACATGCACCTCTATCGACGTTGCAGTGCCACACCGTGGACCGCCGCTTCACTCACCATTGCGATCTTGATCGCACGC CAGCCACGTCACGGTCGGCT
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: Integral Membrane Protein; Metallopeptidase; Zn-Dependent Protease With Chaperone Function; Peptidase M; Peptidase Family M
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIFGVLAVYAALVAYGLPYALRAASWTSRAPRLAVAMWLAAMISVVSVAVLAATLLFIPLHAIGDTLVLLVQWCGWTNHN LTISIHWTTPRVAGVVLSAAAALRLLHVAVAVTVAGRRSRVRHRHDVRLLGRFHPTLRIYILDHADRSAFCLPGRSGGVV ITEGALQALPPTELDAVIAHERAHLAGRHHLILTTAAVLAGAFPAVSLFGTGQEELRRLVELTADDSAARRSAPHVVAEA VLRLAAPPASVLGMANTGVRQRILRLLTAEPPLSRSAVVARSLIVAVLLLLPLVMTTVPALNDLGYHCA
Sequences:
>Translated_309_residues MIFGVLAVYAALVAYGLPYALRAASWTSRAPRLAVAMWLAAMISVVSVAVLAATLLFIPLHAIGDTLVLLVQWCGWTNHN LTISIHWTTPRVAGVVLSAAAALRLLHVAVAVTVAGRRSRVRHRHDVRLLGRFHPTLRIYILDHADRSAFCLPGRSGGVV ITEGALQALPPTELDAVIAHERAHLAGRHHLILTTAAVLAGAFPAVSLFGTGQEELRRLVELTADDSAARRSAPHVVAEA VLRLAAPPASVLGMANTGVRQRILRLLTAEPPLSRSAVVARSLIVAVLLLLPLVMTTVPALNDLGYHCA >Mature_309_residues MIFGVLAVYAALVAYGLPYALRAASWTSRAPRLAVAMWLAAMISVVSVAVLAATLLFIPLHAIGDTLVLLVQWCGWTNHN LTISIHWTTPRVAGVVLSAAAALRLLHVAVAVTVAGRRSRVRHRHDVRLLGRFHPTLRIYILDHADRSAFCLPGRSGGVV ITEGALQALPPTELDAVIAHERAHLAGRHHLILTTAAVLAGAFPAVSLFGTGQEELRRLVELTADDSAARRSAPHVVAEA VLRLAAPPASVLGMANTGVRQRILRLLTAEPPLSRSAVVARSLIVAVLLLLPLVMTTVPALNDLGYHCA
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32920; Mature: 32920
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGVLAVYAALVAYGLPYALRAASWTSRAPRLAVAMWLAAMISVVSVAVLAATLLFIPL CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAIGDTLVLLVQWCGWTNHNLTISIHWTTPRVAGVVLSAAAALRLLHVAVAVTVAGRRSR HHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRHRHDVRLLGRFHPTLRIYILDHADRSAFCLPGRSGGVVITEGALQALPPTELDAVIAH HHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHH ERAHLAGRHHLILTTAAVLAGAFPAVSLFGTGQEELRRLVELTADDSAARRSAPHVVAEA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHH VLRLAAPPASVLGMANTGVRQRILRLLTAEPPLSRSAVVARSLIVAVLLLLPLVMTTVPA HHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNDLGYHCA HHCCCCCCC >Mature Secondary Structure MIFGVLAVYAALVAYGLPYALRAASWTSRAPRLAVAMWLAAMISVVSVAVLAATLLFIPL CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAIGDTLVLLVQWCGWTNHNLTISIHWTTPRVAGVVLSAAAALRLLHVAVAVTVAGRRSR HHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRHRHDVRLLGRFHPTLRIYILDHADRSAFCLPGRSGGVVITEGALQALPPTELDAVIAH HHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHH ERAHLAGRHHLILTTAAVLAGAFPAVSLFGTGQEELRRLVELTADDSAARRSAPHVVAEA HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHH VLRLAAPPASVLGMANTGVRQRILRLLTAEPPLSRSAVVARSLIVAVLLLLPLVMTTVPA HHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNDLGYHCA HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA