| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317456
Identifier: 158317456
GI number: 158317456
Start: 6925738
End: 6926241
Strand: Direct
Name: 158317456
Synonym: Franean1_5708
Alternate gene names: NA
Gene position: 6925738-6926241 (Clockwise)
Preceding gene: 158317455
Following gene: 158317457
Centisome position: 77.11
GC content: 75.99
Gene sequence:
>504_bases GTGGGCACGGGCACCGGAGCCGGCACGGGCACCGCGGCCGGCACGGGCGCGGGTTCGGTCCAGGCCGCCGACCCGGTACG GGTCCGGATCCCGGCCATTGCCGTCTCGGCGCCCGTCGTGCCGTTGTCCCTCGACGGTGGCGGGCGGCTGCGGGCACCGG ACGGGTTCAGCGAGACCGGGTGGAACGCCGCGGGTCCCGAACCGGGCGAGACGGGCACCGCGGTGATCGCCGGCCACGTG GACTCGAGGACGGGCCCGGCGGTCTTCTTCCGCCTGCGGGACCTCGCCCCCGGGGACCGGGTGGAGGTCGAGCGAGCGGA CGGGTCGTCCGTGGCCTTCGTGGTGCGCAGGCTGGCCCGCTTCCCGAAGGACGCGGTGCCCGCCGCCGACGTCTACGGCT CCACGGGGGCGCCCGCGCTGCGGCTCATCACCTGCGGGGGTGTCTTCGACCAGGCCCGTTCCAGCTACCGGGACAACGTC GTGGTGTTCGCCGACCTGGCCTGA
Upstream 100 bases:
>100_bases GGTGTCCTGCGGGCCGCGACCGGACCGGCCGGCCGCGGCGCCGGTGACCCCGCCCGCGGCCGCCGACCGGTCGGCGCCGC CGGCGGTGACGTCCTCCACC
Downstream 100 bases:
>100_bases CGAGCGGCCGGCCGGGAGTCGGGCGGCCCGATGTCGCCCGCTCCCGACCAGCCCCGGGAGCGCAAGCTCACACCCCTGCG GGGGAAAATCGGCGCGGGTC
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Sortase-Like Protein; Peptidase C; Sortase; LOW QUALITY PROTEIN Secreted Protein; C60 Family Sortase A; Sortase D Type
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGTGTGAGTGTAAGTGAGSVQAADPVRVRIPAIAVSAPVVPLSLDGGGRLRAPDGFSETGWNAAGPEPGETGTAVIAGHV DSRTGPAVFFRLRDLAPGDRVEVERADGSSVAFVVRRLARFPKDAVPAADVYGSTGAPALRLITCGGVFDQARSSYRDNV VVFADLA
Sequences:
>Translated_167_residues MGTGTGAGTGTAAGTGAGSVQAADPVRVRIPAIAVSAPVVPLSLDGGGRLRAPDGFSETGWNAAGPEPGETGTAVIAGHV DSRTGPAVFFRLRDLAPGDRVEVERADGSSVAFVVRRLARFPKDAVPAADVYGSTGAPALRLITCGGVFDQARSSYRDNV VVFADLA >Mature_166_residues GTGTGAGTGTAAGTGAGSVQAADPVRVRIPAIAVSAPVVPLSLDGGGRLRAPDGFSETGWNAAGPEPGETGTAVIAGHVD SRTGPAVFFRLRDLAPGDRVEVERADGSSVAFVVRRLARFPKDAVPAADVYGSTGAPALRLITCGGVFDQARSSYRDNVV VFADLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16805; Mature: 16674
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTGTGAGTGTAAGTGAGSVQAADPVRVRIPAIAVSAPVVPLSLDGGGRLRAPDGFSETG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEECCCCCCCCC WNAAGPEPGETGTAVIAGHVDSRTGPAVFFRLRDLAPGDRVEVERADGSSVAFVVRRLAR CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH FPKDAVPAADVYGSTGAPALRLITCGGVFDQARSSYRDNVVVFADLA CCCCCCCCCHHCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure GTGTGAGTGTAAGTGAGSVQAADPVRVRIPAIAVSAPVVPLSLDGGGRLRAPDGFSETG CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEECCCCCCCCC WNAAGPEPGETGTAVIAGHVDSRTGPAVFFRLRDLAPGDRVEVERADGSSVAFVVRRLAR CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH FPKDAVPAADVYGSTGAPALRLITCGGVFDQARSSYRDNVVVFADLA CCCCCCCCCHHCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA