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The map label for this gene is ureD

Identifier: 158317450

GI number: 158317450

Start: 6919881

End: 6920774

Strand: Direct

Name: ureD

Synonym: Franean1_5702

Alternate gene names: 158317450

Gene position: 6919881-6920774 (Clockwise)

Preceding gene: 158317449

Following gene: 158317455

Centisome position: 77.04

GC content: 78.52

Gene sequence:

>894_bases
GTGAACTCGTCCGCAGCGAGCCCGCCCGCGGTCAGCCCGCACGCGGCGCCGTCCCGCACAACCGTTCGGGCGCGCGCCGC
GCTCCAGGTCGAGCTGGACGGCGGCGGGACGGCCAGGATCACCGAGCTGCGCGCGGCGGTGCCCGTGCTGCCGCGGCGCA
CCGGCGGGTCGGGGCGCGTCGTGGTGGTCCACCTTGTGGGCGGTGCGGGTGGCCCGCTCGCCGGCGACGACCTGGGCCTG
GACATCATCGTCGGCGCCGGGGCGCACCTGGTGGTGCGGTCGGTGGCCGCGACCGTGGCCCTGCCCGGCCACGGCGCCGG
GCCGTCGACGTTCGCGCTGCGGGCCCAGGTCGGGCCGGCCGCGATGCTGTCGTTCCTCCCGGAGCCGACGGTCGTCGCCC
GGGGAGCCCGCCACCGGATGACCACCGAGATCATCCTGGCAGCGGACGCGCGGCTGCGGTACCGCGAGGAGATCATCCTT
GGCCGCTTCGGCGAGCCGGGCGGCGACCTCGAGACCTCCCTCCGGGTGGACGTCGACCAGGCACCGGGCCCGGCGCCCAC
CACCGACGCCGGTACCGCCCCCGCCCCCGGGCCGCGGAGACGGCCGCTGCTGCACCAGGAGCTGCGGCTGGGCCCGCGCG
TCCCGGGGGTGGCCGGGCCGGCGGTACTCGCCGGCGCCCGTGCCGTCGGGTCAGTCCTGGTCGCCGGGCCGGCGACCGGT
CTCGAGCCGGTCACCGCCGCGGTAGGGGACAGTGTCGCCCTGATGCCCCTGGCCGGACCGGGGGTCCTCGTCTGCGCGCT
GGCGGACGACGCCCTCGCCCTGCGCCGCCGTCTCGACTCCCTGGCCGGCGTCCTGACCGGCTCCCTGGCCGACCCGCTTC
CCGTCGGGAGCTGA

Upstream 100 bases:

>100_bases
CCGACCGCCCGGTGCTGTTCACCAGCCTCCGCTCCGACGCGGGAGCCTCGGACGTCGCCGACTGGGTCCTCGCCCAGCTG
CCGTCGCCCGCCCGCCCGCA

Downstream 100 bases:

>100_bases
GTAGGTGCGCCCCTTCCAGGCCGCGCCCCGGCCGGCACGGTGCCGCCGGGCCGAGTCCATGGTCATGGCCAGGTAGAGGG
CCGCGGTGAACGGCAGCGCG

Product: putative urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNSSAASPPAVSPHAAPSRTTVRARAALQVELDGGGTARITELRAAVPVLPRRTGGSGRVVVVHLVGGAGGPLAGDDLGL
DIIVGAGAHLVVRSVAATVALPGHGAGPSTFALRAQVGPAAMLSFLPEPTVVARGARHRMTTEIILAADARLRYREEIIL
GRFGEPGGDLETSLRVDVDQAPGPAPTTDAGTAPAPGPRRRPLLHQELRLGPRVPGVAGPAVLAGARAVGSVLVAGPATG
LEPVTAAVGDSVALMPLAGPGVLVCALADDALALRRRLDSLAGVLTGSLADPLPVGS

Sequences:

>Translated_297_residues
MNSSAASPPAVSPHAAPSRTTVRARAALQVELDGGGTARITELRAAVPVLPRRTGGSGRVVVVHLVGGAGGPLAGDDLGL
DIIVGAGAHLVVRSVAATVALPGHGAGPSTFALRAQVGPAAMLSFLPEPTVVARGARHRMTTEIILAADARLRYREEIIL
GRFGEPGGDLETSLRVDVDQAPGPAPTTDAGTAPAPGPRRRPLLHQELRLGPRVPGVAGPAVLAGARAVGSVLVAGPATG
LEPVTAAVGDSVALMPLAGPGVLVCALADDALALRRRLDSLAGVLTGSLADPLPVGS
>Mature_297_residues
MNSSAASPPAVSPHAAPSRTTVRARAALQVELDGGGTARITELRAAVPVLPRRTGGSGRVVVVHLVGGAGGPLAGDDLGL
DIIVGAGAHLVVRSVAATVALPGHGAGPSTFALRAQVGPAAMLSFLPEPTVVARGARHRMTTEIILAADARLRYREEIIL
GRFGEPGGDLETSLRVDVDQAPGPAPTTDAGTAPAPGPRRRPLLHQELRLGPRVPGVAGPAVLAGARAVGSVLVAGPATG
LEPVTAAVGDSVALMPLAGPGVLVCALADDALALRRRLDSLAGVLTGSLADPLPVGS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_FRASN (A8L7B7)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001509958.1
- GeneID:   5674028
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_5702
- HOGENOM:   HBG669368
- OMA:   GWDGPAV
- ProtClustDB:   CLSK947940
- BioCyc:   FSP1855:FRANEAN1_5702-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 29577; Mature: 29577

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSAASPPAVSPHAAPSRTTVRARAALQVELDGGGTARITELRAAVPVLPRRTGGSGRV
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCE
VVVHLVGGAGGPLAGDDLGLDIIVGAGAHLVVRSVAATVALPGHGAGPSTFALRAQVGPA
EEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHH
AMLSFLPEPTVVARGARHRMTTEIILAADARLRYREEIILGRFGEPGGDLETSLRVDVDQ
HHHHHCCCCHHHHCCCCHHCEEEEEEECCCCHHHHHHHEEECCCCCCCCCCCEEEEEECC
APGPAPTTDAGTAPAPGPRRRPLLHQELRLGPRVPGVAGPAVLAGARAVGSVLVAGPATG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCEEEEECCCCC
LEPVTAAVGDSVALMPLAGPGVLVCALADDALALRRRLDSLAGVLTGSLADPLPVGS
CCHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSSAASPPAVSPHAAPSRTTVRARAALQVELDGGGTARITELRAAVPVLPRRTGGSGRV
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCE
VVVHLVGGAGGPLAGDDLGLDIIVGAGAHLVVRSVAATVALPGHGAGPSTFALRAQVGPA
EEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHH
AMLSFLPEPTVVARGARHRMTTEIILAADARLRYREEIILGRFGEPGGDLETSLRVDVDQ
HHHHHCCCCHHHHCCCCHHCEEEEEEECCCCHHHHHHHEEECCCCCCCCCCCEEEEEECC
APGPAPTTDAGTAPAPGPRRRPLLHQELRLGPRVPGVAGPAVLAGARAVGSVLVAGPATG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCEEEEECCCCC
LEPVTAAVGDSVALMPLAGPGVLVCALADDALALRRRLDSLAGVLTGSLADPLPVGS
CCHHHHHHCCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA