Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is insQ [H]

Identifier: 158317439

GI number: 158317439

Start: 6909713

End: 6910903

Strand: Direct

Name: insQ [H]

Synonym: Franean1_5691

Alternate gene names: 158317439

Gene position: 6909713-6910903 (Clockwise)

Preceding gene: 158317434

Following gene: 158317441

Centisome position: 76.93

GC content: 67.25

Gene sequence:

>1191_bases
GTGTCCCGGTTCCGGCTTTACCCGGCGTCCGAGCAGGCTGCTGTAATGGAGGCCCACTGCGGCCACGCACGGTTTGTGTG
GAATCTTGCCGTAGAACAGCAGTCGTGGTGGACGCCGCGACGCGGGCCGGCGCCGGACTACCACGAGCAGTCCCGGCAGC
TCACCGAAGCGCGACGCGAGTTCCCGTGGCTCACCGAAGGGTCGCAGACCGTTCAGCAGCAGGCGTTGCGGGATTTTGCA
CAGGCCATGGACAACTACTTCCGGGGCAGTCACCGGAAGCCGACGTTTCGGAAACGTGGCCGGTCGGAGGGGTTCCGGAT
CGTCGCTGTCAAATCCTCGGATATTCGCACGGTGAACCGGCGCTGGTCCGAGGTGAGGGTTCCCAAGGTCGGCTGGGTGC
GTTTCCGTCGCTCGCGGACTGTCCCGAAGGCGAAGTCCTACCGGGTCACCAGGGACCGGGCTGGCCGGTGGCATGTGGCG
TTCGCCGCGATCCCCGAACCGATCGACGCACCGGGTACCGGTGCGACCGTCGGTGTCGACCGTGGGGTGGCTGTGTCGGC
GGCGCTGTCGACGGGCGAACTGCTGTCCTGCCCGAGACTGCCGCCCACAGAGGCGCAGCGGCTGGTCAGGCTGCAACGGC
GACTTGCCCGGGCGAAGCGCGACAGCAACCGGCGCAGCCGTCTCAAGGCCCAGATCGCCCGGGTGAAGGCCCGTGAGGTG
GACCGGCGGAAGGACTGGGTGGAGAAGACCAGTACCGACCTTTCCCGCCGATTCGACCTGATCCGCGTCGAAGACCTGAA
GGTCAGGAACATGACCCGCTCGGCGCGGGGCACCGGGGAGGCACCGGGCAGGAACGTCCGCCAGAAAGCCGGCCTGAACC
GGGCCATCCTGGCAAGCGGTTGGGGCCTGCTGGTGCAGCGCCTCGAGGACAAGGCCCCCGGCCGGGTCGAGAAGATACCC
GCCGCGTACACCTCTCAGTGCTGTTCTGCCTGCAGGCATGTCGCTACCGAGTCGCGTGAGAGCCAAGCACGATTCGCCTG
CGTCGCCTGCGGATATGAGGACAACGCCGATGTGAACGCGGCTAGGAACATCGCGGAGGGACACGCCGTGACTGCGCGGG
GAGGCATCGGACTGCCGAAGCCCATGAACCGCGAACCTCAACTAACCGCACCTCCTCCGGTCACTGCGTGA

Upstream 100 bases:

>100_bases
TCGTCATCGGGCTTGCGGCGTGGAGGCCCCGGTCTTCAGGCCGGGGAGGAGACGCCCCATGCTGGAATGCATGTTCGTAT
CCTTTCAATAGAATAGCGGC

Downstream 100 bases:

>100_bases
TTAGTTGGAATCTCCGCCTTTTAGGGCGGGGAGGATGTCAAACGAGATCAGGCTTCTCCTCGTAGAGCTCCTTAATGATG
GACAGGTCGAACAGCTCGTC

Product: DNA (cytosine-5-)-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSRFRLYPASEQAAVMEAHCGHARFVWNLAVEQQSWWTPRRGPAPDYHEQSRQLTEARREFPWLTEGSQTVQQQALRDFA
QAMDNYFRGSHRKPTFRKRGRSEGFRIVAVKSSDIRTVNRRWSEVRVPKVGWVRFRRSRTVPKAKSYRVTRDRAGRWHVA
FAAIPEPIDAPGTGATVGVDRGVAVSAALSTGELLSCPRLPPTEAQRLVRLQRRLARAKRDSNRRSRLKAQIARVKAREV
DRRKDWVEKTSTDLSRRFDLIRVEDLKVRNMTRSARGTGEAPGRNVRQKAGLNRAILASGWGLLVQRLEDKAPGRVEKIP
AAYTSQCCSACRHVATESRESQARFACVACGYEDNADVNAARNIAEGHAVTARGGIGLPKPMNREPQLTAPPPVTA

Sequences:

>Translated_396_residues
MSRFRLYPASEQAAVMEAHCGHARFVWNLAVEQQSWWTPRRGPAPDYHEQSRQLTEARREFPWLTEGSQTVQQQALRDFA
QAMDNYFRGSHRKPTFRKRGRSEGFRIVAVKSSDIRTVNRRWSEVRVPKVGWVRFRRSRTVPKAKSYRVTRDRAGRWHVA
FAAIPEPIDAPGTGATVGVDRGVAVSAALSTGELLSCPRLPPTEAQRLVRLQRRLARAKRDSNRRSRLKAQIARVKAREV
DRRKDWVEKTSTDLSRRFDLIRVEDLKVRNMTRSARGTGEAPGRNVRQKAGLNRAILASGWGLLVQRLEDKAPGRVEKIP
AAYTSQCCSACRHVATESRESQARFACVACGYEDNADVNAARNIAEGHAVTARGGIGLPKPMNREPQLTAPPPVTA
>Mature_395_residues
SRFRLYPASEQAAVMEAHCGHARFVWNLAVEQQSWWTPRRGPAPDYHEQSRQLTEARREFPWLTEGSQTVQQQALRDFAQ
AMDNYFRGSHRKPTFRKRGRSEGFRIVAVKSSDIRTVNRRWSEVRVPKVGWVRFRRSRTVPKAKSYRVTRDRAGRWHVAF
AAIPEPIDAPGTGATVGVDRGVAVSAALSTGELLSCPRLPPTEAQRLVRLQRRLARAKRDSNRRSRLKAQIARVKAREVD
RRKDWVEKTSTDLSRRFDLIRVEDLKVRNMTRSARGTGEAPGRNVRQKAGLNRAILASGWGLLVQRLEDKAPGRVEKIPA
AYTSQCCSACRHVATESRESQARFACVACGYEDNADVNAARNIAEGHAVTARGGIGLPKPMNREPQLTAPPPVTA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=382, Percent_Identity=36.6492146596859, Blast_Score=218, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 44618; Mature: 44487

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRLYPASEQAAVMEAHCGHARFVWNLAVEQQSWWTPRRGPAPDYHEQSRQLTEARRE
CCCEECCCCCCHHHHHHHCCCCEEEEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHH
FPWLTEGSQTVQQQALRDFAQAMDNYFRGSHRKPTFRKRGRSEGFRIVAVKSSDIRTVNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHH
RWSEVRVPKVGWVRFRRSRTVPKAKSYRVTRDRAGRWHVAFAAIPEPIDAPGTGATVGVD
HHHHCCCCCHHHHHHHHHCCCCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCCCEEECC
RGVAVSAALSTGELLSCPRLPPTEAQRLVRLQRRLARAKRDSNRRSRLKAQIARVKAREV
CCCEEEEHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DRRKDWVEKTSTDLSRRFDLIRVEDLKVRNMTRSARGTGEAPGRNVRQKAGLNRAILASG
HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHH
WGLLVQRLEDKAPGRVEKIPAAYTSQCCSACRHVATESRESQARFACVACGYEDNADVNA
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCHHH
ARNIAEGHAVTARGGIGLPKPMNREPQLTAPPPVTA
HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRFRLYPASEQAAVMEAHCGHARFVWNLAVEQQSWWTPRRGPAPDYHEQSRQLTEARRE
CCEECCCCCCHHHHHHHCCCCEEEEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHH
FPWLTEGSQTVQQQALRDFAQAMDNYFRGSHRKPTFRKRGRSEGFRIVAVKSSDIRTVNR
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHH
RWSEVRVPKVGWVRFRRSRTVPKAKSYRVTRDRAGRWHVAFAAIPEPIDAPGTGATVGVD
HHHHCCCCCHHHHHHHHHCCCCCCCCEEEHHCCCCCEEEEEEECCCCCCCCCCCCEEECC
RGVAVSAALSTGELLSCPRLPPTEAQRLVRLQRRLARAKRDSNRRSRLKAQIARVKAREV
CCCEEEEHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DRRKDWVEKTSTDLSRRFDLIRVEDLKVRNMTRSARGTGEAPGRNVRQKAGLNRAILASG
HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHH
WGLLVQRLEDKAPGRVEKIPAAYTSQCCSACRHVATESRESQARFACVACGYEDNADVNA
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCHHH
ARNIAEGHAVTARGGIGLPKPMNREPQLTAPPPVTA
HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]