Click here to switch to the map view.

The map label for this gene is 158317437

Identifier: 158317437

GI number: 158317437

Start: 6907986

End: 6908750

Strand: Reverse

Name: 158317437

Synonym: Franean1_5689

Alternate gene names: NA

Gene position: 6908750-6907986 (Counterclockwise)

Preceding gene: 158317438

Following gene: 158317436

Centisome position: 76.92

GC content: 73.46

Gene sequence:

>765_bases
ATGACCCGGCCGGCGTGGCTCGGCGGGACGATCGGCGTCGTCGGCCTGGTCGCCGTGTGGTGGCTGCTCGCCGTGACGCT
GCTCGACCGCGGAAGCGTCGTGCCCACGCCCTGGGAGGTCGTCCACGCCCTGTGGGACGACCATCGCCTGCTCTGGACGT
CCGCCCGGTCGACCGTGTCGATCGCGGCCCAGGGCTGGCTCATCGGCAACGGCCTGGCGATCGGCCTCGCGGTGCTGTTC
TTCGGCGTCCCCGTCGTCGAGCGGGTGCTGCTCCAGATCGGGGTGGCCTCCTACTGCCTGCCGATCATCGCGATCGGCCC
GATCCTGACCACGGTCTTCGACGGCAGCACGCCGCAGAAGGCACTGGCCGGGATCTCGGTGTTCTTCACGACGCTGGTCG
GCACCCTGCTCGGCCTGCGCGCGGCCGACCCGGCCAGCCTCGACGTGATCCGGGCCAGCGGCGGCGGCGTCGTCCACCAG
ATGCGCTACGTCCGGCTGCGCGCCGCCCTGCCGAGCACCTTCGCGGCGCTGCAGATCGCCGCGCCGGCCGCGATCCTGGG
TGCGATCATCGGCGAGTTCCTCGGCGCCGACCGCGGCCTCGGGATCGCCATGGTCAACTCGCAGCAGGCACTGGAGGTGC
CGCGCACCTGGGCGCTGGCCCTGGTCGCCTCCGCCATCGCCGGTCTCGGCTACGCCCTGACCGCGCTGCTGGCCCGGCTG
CTGACGCCCTGGGCCCCCCGCGGTAACCCTGGAGGCGCCCGATGA

Upstream 100 bases:

>100_bases
GCACCCCGGAGATGCTGCGCACCGCCCGGTTCCACGAGCTGCACGACGAGCTGTCCACGCTCCTGTTCGCCGGTACCGGC
CCGACGGCAGGGGAGGCCGG

Downstream 100 bases:

>100_bases
GCACCGTGACGCCGGACACCGCATCGTCCGGCGGTCGTGGCAGCCGGGTGGCGGGGGCGATTGCCGCGCGGGCCGGGCGG
ACCCTGCTCTCGGTCGTCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTRPAWLGGTIGVVGLVAVWWLLAVTLLDRGSVVPTPWEVVHALWDDHRLLWTSARSTVSIAAQGWLIGNGLAIGLAVLF
FGVPVVERVLLQIGVASYCLPIIAIGPILTTVFDGSTPQKALAGISVFFTTLVGTLLGLRAADPASLDVIRASGGGVVHQ
MRYVRLRAALPSTFAALQIAAPAAILGAIIGEFLGADRGLGIAMVNSQQALEVPRTWALALVASAIAGLGYALTALLARL
LTPWAPRGNPGGAR

Sequences:

>Translated_254_residues
MTRPAWLGGTIGVVGLVAVWWLLAVTLLDRGSVVPTPWEVVHALWDDHRLLWTSARSTVSIAAQGWLIGNGLAIGLAVLF
FGVPVVERVLLQIGVASYCLPIIAIGPILTTVFDGSTPQKALAGISVFFTTLVGTLLGLRAADPASLDVIRASGGGVVHQ
MRYVRLRAALPSTFAALQIAAPAAILGAIIGEFLGADRGLGIAMVNSQQALEVPRTWALALVASAIAGLGYALTALLARL
LTPWAPRGNPGGAR
>Mature_253_residues
TRPAWLGGTIGVVGLVAVWWLLAVTLLDRGSVVPTPWEVVHALWDDHRLLWTSARSTVSIAAQGWLIGNGLAIGLAVLFF
GVPVVERVLLQIGVASYCLPIIAIGPILTTVFDGSTPQKALAGISVFFTTLVGTLLGLRAADPASLDVIRASGGGVVHQM
RYVRLRAALPSTFAALQIAAPAAILGAIIGEFLGADRGLGIAMVNSQQALEVPRTWALALVASAIAGLGYALTALLARLL
TPWAPRGNPGGAR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26405; Mature: 26273

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPAWLGGTIGVVGLVAVWWLLAVTLLDRGSVVPTPWEVVHALWDDHRLLWTSARSTVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEE
IAAQGWLIGNGLAIGLAVLFFGVPVVERVLLQIGVASYCLPIIAIGPILTTVFDGSTPQK
EHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALAGISVFFTTLVGTLLGLRAADPASLDVIRASGGGVVHQMRYVRLRAALPSTFAALQIA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
APAAILGAIIGEFLGADRGLGIAMVNSQQALEVPRTWALALVASAIAGLGYALTALLARL
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTPWAPRGNPGGAR
HCCCCCCCCCCCCC
>Mature Secondary Structure 
TRPAWLGGTIGVVGLVAVWWLLAVTLLDRGSVVPTPWEVVHALWDDHRLLWTSARSTVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEE
IAAQGWLIGNGLAIGLAVLFFGVPVVERVLLQIGVASYCLPIIAIGPILTTVFDGSTPQK
EHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALAGISVFFTTLVGTLLGLRAADPASLDVIRASGGGVVHQMRYVRLRAALPSTFAALQIA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
APAAILGAIIGEFLGADRGLGIAMVNSQQALEVPRTWALALVASAIAGLGYALTALLARL
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTPWAPRGNPGGAR
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]