| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is atzB [H]
Identifier: 158317423
GI number: 158317423
Start: 6887281
End: 6888702
Strand: Direct
Name: atzB [H]
Synonym: Franean1_5674
Alternate gene names: 158317423
Gene position: 6887281-6888702 (Clockwise)
Preceding gene: 158317421
Following gene: 158317424
Centisome position: 76.68
GC content: 69.97
Gene sequence:
>1422_bases GTGATTGGCGCGGAGCTTGTCGCCACGGTCGATGCCGACCGCCGAGAGATCCCAGGCGGCTGGGTAGCAATCACCGACGG CCTCGTCAGCTCCCTCGGCGGCCCGGCGGAGACACCCCCGACCGCGACCCGGACCCTGCGTGCCGACGGCTGTCTCATAA CGCCGGGCCTGGTGAACACACATCATCACATCTACCAGAACCTCACCCGTTCCTTCGCTCCGGCACTCGGCGGCACCCTT TTCACCTGGCTGACCACGCTCTATCCACTCTGGTCACGGCTGGACGAGGAGGCCGTCCACACCTCGGCCTACGTGGGCCT GACCGAACTGGCGCTCGGCGGCTGCACGACATCAACAGACCACCTCTACGTGCACCCGCGCGGTGGCGGCGATCTCATCT CCGCCGAGATCGCGGCAGCCCGGACCCTGGGCATGCGGTTCCACCCGACCCGCGGCTCGATGTCGCTTTCGGTCAAGGAC GGCGGGCTCCCTCCTGACTCTGTCGTCCAGGACGCGGATGAGATCCTCGCCGACTCCGCCCGGCTTGTGGCCCAGCATCA CGACCCGTCCCACGGCGCGATGGTGCGGATCGCCCTGGCCCCCTGTTCGCCGTTCTCCGTCAGTCCGGAACTCATGCGGG CCACCGCGGAACTGGCCGAGTCCTTGGACGTCCGGCTACACACGCATCTCGCCGAGGACCCCGAGGAGGACGACTACTGC CTGGCGGTGTTCGGACGGCGTCCGATCGACCAGTTCGCGGAGGTTGGCTGGGGCGGCGACCGGGCGTGGGTCGCGCACTG CATCTGCCCCAATGACGAGGAGGTCGAGCAGCTCGGCAGGTGGGGCACAGGGGTGGCCCACTGCCCGAGCAGCAACATGA TTCTCGGCGGCGGCCTCGCGCCCGTGGCCGAGCTCCGCTCGGCCGGCGCCCCGGTCGGCCTGGGCTGCGACGGGTCGTCA TCCGCCGACTCCGCCTCGCTGTGGTTGGAGGCTCGTACCGCCATGCTGTTGGGCCGGCTGCGACACGGCGCCGCGGCGAT GTCCGCCCGGGACGCGCTGGAGATCGCCACCCGGGGCGGCGCAGGCTGTCTCGGCAGGACCGGTGAGATCGGTGAGCTCT CCGTCGGGTCTGTCGGCGACCTCGTCGTCTGGCCGTTGGACGGGGTCGCGTACGCGGGAGCGCTCTCCGATCCGATCGAC GCCTGGCTGCGTTGCGGGCCCACAGCGGCCCGGCACACGATCGTGGCCGGCAGGCTGGTGGTGGAGAACGGAGTGCCGGT CCATCCTGATCTCGACGAGATGCTCGTCCGGCACCGCCGGACCGCCGGCGGCATCCAGGCGGCGTTCGACGATGCGGGCA TCGATCCGACCGTTCCCATCAATACCGGCGGCAGCAGCGTCGGGGCGGCAAAATCACTTTGA
Upstream 100 bases:
>100_bases GACCAGCAGCCCAGGCGGCCCAGCCAGGCCAAGCGGCACGGCCGCGGCTGGCGACGCACCGGCGGGGCAACGCCCGGATC ATCTTCCTGTCGATCTCCTG
Downstream 100 bases:
>100_bases GCATTCTGGCCCATAGAAGGCAGTTCGACGCCCCAACACCGAAATCTCCGCCCGTTGAGATCGACCCGGGTGCTCCGCAC CTGACCGCGGAACCTCATAT
Product: amidohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MIGAELVATVDADRREIPGGWVAITDGLVSSLGGPAETPPTATRTLRADGCLITPGLVNTHHHIYQNLTRSFAPALGGTL FTWLTTLYPLWSRLDEEAVHTSAYVGLTELALGGCTTSTDHLYVHPRGGGDLISAEIAAARTLGMRFHPTRGSMSLSVKD GGLPPDSVVQDADEILADSARLVAQHHDPSHGAMVRIALAPCSPFSVSPELMRATAELAESLDVRLHTHLAEDPEEDDYC LAVFGRRPIDQFAEVGWGGDRAWVAHCICPNDEEVEQLGRWGTGVAHCPSSNMILGGGLAPVAELRSAGAPVGLGCDGSS SADSASLWLEARTAMLLGRLRHGAAAMSARDALEIATRGGAGCLGRTGEIGELSVGSVGDLVVWPLDGVAYAGALSDPID AWLRCGPTAARHTIVAGRLVVENGVPVHPDLDEMLVRHRRTAGGIQAAFDDAGIDPTVPINTGGSSVGAAKSL
Sequences:
>Translated_473_residues MIGAELVATVDADRREIPGGWVAITDGLVSSLGGPAETPPTATRTLRADGCLITPGLVNTHHHIYQNLTRSFAPALGGTL FTWLTTLYPLWSRLDEEAVHTSAYVGLTELALGGCTTSTDHLYVHPRGGGDLISAEIAAARTLGMRFHPTRGSMSLSVKD GGLPPDSVVQDADEILADSARLVAQHHDPSHGAMVRIALAPCSPFSVSPELMRATAELAESLDVRLHTHLAEDPEEDDYC LAVFGRRPIDQFAEVGWGGDRAWVAHCICPNDEEVEQLGRWGTGVAHCPSSNMILGGGLAPVAELRSAGAPVGLGCDGSS SADSASLWLEARTAMLLGRLRHGAAAMSARDALEIATRGGAGCLGRTGEIGELSVGSVGDLVVWPLDGVAYAGALSDPID AWLRCGPTAARHTIVAGRLVVENGVPVHPDLDEMLVRHRRTAGGIQAAFDDAGIDPTVPINTGGSSVGAAKSL >Mature_473_residues MIGAELVATVDADRREIPGGWVAITDGLVSSLGGPAETPPTATRTLRADGCLITPGLVNTHHHIYQNLTRSFAPALGGTL FTWLTTLYPLWSRLDEEAVHTSAYVGLTELALGGCTTSTDHLYVHPRGGGDLISAEIAAARTLGMRFHPTRGSMSLSVKD GGLPPDSVVQDADEILADSARLVAQHHDPSHGAMVRIALAPCSPFSVSPELMRATAELAESLDVRLHTHLAEDPEEDDYC LAVFGRRPIDQFAEVGWGGDRAWVAHCICPNDEEVEQLGRWGTGVAHCPSSNMILGGGLAPVAELRSAGAPVGLGCDGSS SADSASLWLEARTAMLLGRLRHGAAAMSARDALEIATRGGAGCLGRTGEIGELSVGSVGDLVVWPLDGVAYAGALSDPID AWLRCGPTAARHTIVAGRLVVENGVPVHPDLDEMLVRHRRTAGGIQAAFDDAGIDPTVPINTGGSSVGAAKSL
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=341, Percent_Identity=23.7536656891496, Blast_Score=84, Evalue=4e-16, Organism=Escherichia coli, GI1789249, Length=430, Percent_Identity=28.1395348837209, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87082177, Length=438, Percent_Identity=21.689497716895, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319963, Length=345, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24643849, Length=399, Percent_Identity=25.31328320802, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 49337; Mature: 49337
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGAELVATVDADRREIPGGWVAITDGLVSSLGGPAETPPTATRTLRADGCLITPGLVNT CCCCCEEEEECCCHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCCH HHHIYQNLTRSFAPALGGTLFTWLTTLYPLWSRLDEEAVHTSAYVGLTELALGGCTTSTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HLYVHPRGGGDLISAEIAAARTLGMRFHPTRGSMSLSVKDGGLPPDSVVQDADEILADSA EEEEEECCCCCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH RLVAQHHDPSHGAMVRIALAPCSPFSVSPELMRATAELAESLDVRLHTHLAEDPEEDDYC HHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCEE LAVFGRRPIDQFAEVGWGGDRAWVAHCICPNDEEVEQLGRWGTGVAHCPSSNMILGGGLA EEEECCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCEEEECCCH PVAELRSAGAPVGLGCDGSSSADSASLWLEARTAMLLGRLRHGAAAMSARDALEIATRGG HHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGCLGRTGEIGELSVGSVGDLVVWPLDGVAYAGALSDPIDAWLRCGPTAARHTIVAGRLV CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHCCCHHHHHEEEECEEE VENGVPVHPDLDEMLVRHRRTAGGIQAAFDDAGIDPTVPINTGGSSVGAAKSL EECCCCCCCCHHHHHHHHHHCCCCCEEHHCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MIGAELVATVDADRREIPGGWVAITDGLVSSLGGPAETPPTATRTLRADGCLITPGLVNT CCCCCEEEEECCCHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCCH HHHIYQNLTRSFAPALGGTLFTWLTTLYPLWSRLDEEAVHTSAYVGLTELALGGCTTSTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HLYVHPRGGGDLISAEIAAARTLGMRFHPTRGSMSLSVKDGGLPPDSVVQDADEILADSA EEEEEECCCCCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH RLVAQHHDPSHGAMVRIALAPCSPFSVSPELMRATAELAESLDVRLHTHLAEDPEEDDYC HHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCEE LAVFGRRPIDQFAEVGWGGDRAWVAHCICPNDEEVEQLGRWGTGVAHCPSSNMILGGGLA EEEECCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCEEEECCCH PVAELRSAGAPVGLGCDGSSSADSASLWLEARTAMLLGRLRHGAAAMSARDALEIATRGG HHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGCLGRTGEIGELSVGSVGDLVVWPLDGVAYAGALSDPIDAWLRCGPTAARHTIVAGRLV CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHCCCHHHHHEEEECEEE VENGVPVHPDLDEMLVRHRRTAGGIQAAFDDAGIDPTVPINTGGSSVGAAKSL EECCCCCCCCHHHHHHHHHHCCCCCEEHHCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]