| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is potA [H]
Identifier: 158317419
GI number: 158317419
Start: 6883599
End: 6884318
Strand: Direct
Name: potA [H]
Synonym: Franean1_5670
Alternate gene names: 158317419
Gene position: 6883599-6884318 (Clockwise)
Preceding gene: 158317418
Following gene: 158317421
Centisome position: 76.64
GC content: 72.36
Gene sequence:
>720_bases ATGGCGGACAGCGGTCGTCGGGGCGGACAGATCGAAATGGTCGGGCTGAGCCGACGGTTCGGGGACGTGGCTGCCGTTGA CGGCGTCGATCTGACGGTCCAGGCGGGCGAGTACTTCTGCCTTCTCGGTCCGTCCGGATGCGGCAAGACCACGGCCCTCC GGCTGATCTCGGGACTCGACGAACCGTCGTCCGGGCATGTTCGTCTTGACGGCGAGGACCTCGCCGACATGCCGGCCCAC CGCCGCCCCGTCAGCGCGGTCTTCGGCGGCTACGCCCTGTTCCCCTTCCTGGACGTCGCCGCGAACGTCGCCTTCGGTCT GCGGCACGCGCGGGGCGTCACCATGCCGGGCCGGGCCGAGACCTCGGCGCGGGTCCGCTCCGCCCTCGCCGTCGTTCAGA TGTCGGAGTACGCCCGCCGCCGCCCGCCCCAGCTCTCCGCCGAGCAGCAGCAACGGGTCGTGCTGGCCCGGGCGCTGGTG CTGCGCCCCAGGGTGCTGCTGCTGGATGACCCCCTCGGCTCCCAGGACGAACGGCTGCGCCGCGCCCTGCGCGACGGGCT CAAGGCGTTGCAACGACAGGTCGGGGTGACCGTGCTGCACGCCACCGTCGACCGGGAGGAGGCCCTGGCGCTGTCCGACC GCCTGGCCGTGATGCGCGGCGGACGGATCCTCCAGGTAGGCACGGCCGGTGAACTCCACCAGGAACCGACAGCCGCCTGA
Upstream 100 bases:
>100_bases CCCGTGGATTACGGGGCGGCCGGACGCATCCCGCGCCGGGGTGAGACTGTCGTTCCCGCCCGGTACGCACCACGGCGGGC CGGGAGATCTGGGGGTGAGC
Downstream 100 bases:
>100_bases GTTCAAGACCCAGCTTTCGCCTTCGGGAGCCCCGCGGGAAGGTCCGCCGTCCCACCGGCCGCGCTACGGCGGCGATGCGC CAACGCCGCGAAAATCTCCA
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MADSGRRGGQIEMVGLSRRFGDVAAVDGVDLTVQAGEYFCLLGPSGCGKTTALRLISGLDEPSSGHVRLDGEDLADMPAH RRPVSAVFGGYALFPFLDVAANVAFGLRHARGVTMPGRAETSARVRSALAVVQMSEYARRRPPQLSAEQQQRVVLARALV LRPRVLLLDDPLGSQDERLRRALRDGLKALQRQVGVTVLHATVDREEALALSDRLAVMRGGRILQVGTAGELHQEPTAA
Sequences:
>Translated_239_residues MADSGRRGGQIEMVGLSRRFGDVAAVDGVDLTVQAGEYFCLLGPSGCGKTTALRLISGLDEPSSGHVRLDGEDLADMPAH RRPVSAVFGGYALFPFLDVAANVAFGLRHARGVTMPGRAETSARVRSALAVVQMSEYARRRPPQLSAEQQQRVVLARALV LRPRVLLLDDPLGSQDERLRRALRDGLKALQRQVGVTVLHATVDREEALALSDRLAVMRGGRILQVGTAGELHQEPTAA >Mature_238_residues ADSGRRGGQIEMVGLSRRFGDVAAVDGVDLTVQAGEYFCLLGPSGCGKTTALRLISGLDEPSSGHVRLDGEDLADMPAHR RPVSAVFGGYALFPFLDVAANVAFGLRHARGVTMPGRAETSARVRSALAVVQMSEYARRRPPQLSAEQQQRVVLARALVL RPRVLLLDDPLGSQDERLRRALRDGLKALQRQVGVTVLHATVDREEALALSDRLAVMRGGRILQVGTAGELHQEPTAA
Specific function: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [H]
COG id: COG3842
COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42741659, Length=219, Percent_Identity=28.7671232876712, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI9961250, Length=225, Percent_Identity=29.3333333333333, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4505771, Length=225, Percent_Identity=29.3333333333333, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI9961252, Length=225, Percent_Identity=29.3333333333333, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=29.7169811320755, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI255708477, Length=217, Percent_Identity=29.4930875576037, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=29.4930875576037, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI116734710, Length=231, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI105990541, Length=207, Percent_Identity=29.4685990338164, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI171184400, Length=222, Percent_Identity=28.3783783783784, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI27436953, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=25.5707762557078, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=25.5707762557078, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI150417984, Length=217, Percent_Identity=33.6405529953917, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=28.310502283105, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=28.310502283105, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI21536378, Length=231, Percent_Identity=25.5411255411255, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=28.2407407407407, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27262624, Length=227, Percent_Identity=28.1938325991189, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27262626, Length=227, Percent_Identity=28.1938325991189, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI9955963, Length=226, Percent_Identity=28.7610619469027, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI6005701, Length=240, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27477115, Length=212, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9665248, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI153792144, Length=216, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=49.5575221238938, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=44.7368421052632, Blast_Score=210, Evalue=7e-56, Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=42.9824561403509, Blast_Score=204, Evalue=3e-54, Organism=Escherichia coli, GI1787712, Length=226, Percent_Identity=45.1327433628319, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=40.7079646017699, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=36.283185840708, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI87082267, Length=218, Percent_Identity=36.2385321100917, Blast_Score=154, Evalue=4e-39, Organism=Escherichia coli, GI1789032, Length=232, Percent_Identity=35.3448275862069, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1788450, Length=226, Percent_Identity=36.283185840708, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=33.6206896551724, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=31.4893617021277, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1786253, Length=203, Percent_Identity=36.9458128078818, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=37.0192307692308, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=34.4036697247706, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=34.6666666666667, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=33.0543933054393, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1786398, Length=235, Percent_Identity=28.936170212766, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=32.2314049586777, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=30.8016877637131, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=33.7662337662338, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787500, Length=224, Percent_Identity=31.6964285714286, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789873, Length=185, Percent_Identity=37.2972972972973, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1790162, Length=241, Percent_Identity=27.3858921161826, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786319, Length=219, Percent_Identity=32.4200913242009, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1786703, Length=214, Percent_Identity=35.5140186915888, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081782, Length=226, Percent_Identity=32.3008849557522, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI48995001, Length=223, Percent_Identity=30.4932735426009, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789864, Length=237, Percent_Identity=28.6919831223629, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1789586, Length=231, Percent_Identity=31.6017316017316, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786872, Length=234, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789991, Length=226, Percent_Identity=30.0884955752212, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787758, Length=229, Percent_Identity=31.0043668122271, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787547, Length=228, Percent_Identity=26.7543859649123, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI145693107, Length=229, Percent_Identity=31.4410480349345, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=24.7863247863248, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789962, Length=221, Percent_Identity=26.2443438914027, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=29.2887029288703, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1790525, Length=232, Percent_Identity=25.4310344827586, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787792, Length=222, Percent_Identity=27.4774774774775, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082268, Length=213, Percent_Identity=28.169014084507, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=31.390134529148, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788053, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787105, Length=208, Percent_Identity=32.2115384615385, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788210, Length=218, Percent_Identity=27.0642201834862, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788644, Length=248, Percent_Identity=28.2258064516129, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786803, Length=221, Percent_Identity=28.0542986425339, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788897, Length=236, Percent_Identity=29.2372881355932, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1788540, Length=221, Percent_Identity=28.9592760180996, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788472, Length=217, Percent_Identity=23.5023041474654, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786654, Length=245, Percent_Identity=28.9795918367347, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786981, Length=210, Percent_Identity=30, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787143, Length=221, Percent_Identity=27.6018099547511, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994997, Length=214, Percent_Identity=27.1028037383178, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=239, Percent_Identity=27.1966527196653, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786653, Length=221, Percent_Identity=28.9592760180996, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787759, Length=234, Percent_Identity=27.3504273504274, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786345, Length=206, Percent_Identity=27.1844660194175, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI212646699, Length=239, Percent_Identity=30.1255230125523, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=29.9107142857143, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17510237, Length=222, Percent_Identity=26.5765765765766, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17541710, Length=224, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193211015, Length=215, Percent_Identity=28.8372093023256, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI193211017, Length=215, Percent_Identity=28.8372093023256, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI71996809, Length=215, Percent_Identity=28.8372093023256, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17558664, Length=240, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71984940, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=26.4840182648402, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17569145, Length=216, Percent_Identity=26.3888888888889, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17569143, Length=216, Percent_Identity=27.3148148148148, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17567265, Length=215, Percent_Identity=26.5116279069767, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565938, Length=226, Percent_Identity=27.4336283185841, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115535101, Length=216, Percent_Identity=27.3148148148148, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17543740, Length=226, Percent_Identity=26.1061946902655, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71992290, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115533608, Length=196, Percent_Identity=30.6122448979592, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17511077, Length=223, Percent_Identity=25.5605381165919, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115534520, Length=217, Percent_Identity=26.7281105990783, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209708, Length=213, Percent_Identity=27.6995305164319, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17565586, Length=217, Percent_Identity=28.110599078341, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17533971, Length=210, Percent_Identity=29.5238095238095, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115533592, Length=217, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567269, Length=224, Percent_Identity=25.8928571428571, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=26.9767441860465, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=26.9767441860465, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=26.9767441860465, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992285, Length=212, Percent_Identity=26.4150943396226, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=228, Percent_Identity=27.6315789473684, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324985, Length=225, Percent_Identity=23.5555555555556, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=232, Percent_Identity=25, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI24643674, Length=220, Percent_Identity=28.6363636363636, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24659289, Length=221, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI221512771, Length=231, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648314, Length=238, Percent_Identity=30.2521008403361, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI85726357, Length=222, Percent_Identity=26.1261261261261, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI116007184, Length=216, Percent_Identity=28.7037037037037, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24666092, Length=235, Percent_Identity=26.8085106382979, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI17136662, Length=211, Percent_Identity=27.0142180094787, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI281363262, Length=255, Percent_Identity=27.0588235294118, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653245, Length=255, Percent_Identity=27.0588235294118, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574744, Length=202, Percent_Identity=31.6831683168317, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641565, Length=218, Percent_Identity=29.3577981651376, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573573, Length=220, Percent_Identity=25.9090909090909, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28573571, Length=220, Percent_Identity=25.9090909090909, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI85725262, Length=227, Percent_Identity=28.1938325991189, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397593, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR017879 - InterPro: IPR005893 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: =3.6.3.31 [H]
Molecular weight: Translated: 25679; Mature: 25548
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSGRRGGQIEMVGLSRRFGDVAAVDGVDLTVQAGEYFCLLGPSGCGKTTALRLISGLD CCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCC EPSSGHVRLDGEDLADMPAHRRPVSAVFGGYALFPFLDVAANVAFGLRHARGVTMPGRAE CCCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TSARVRSALAVVQMSEYARRRPPQLSAEQQQRVVLARALVLRPRVLLLDDPLGSQDERLR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH RALRDGLKALQRQVGVTVLHATVDREEALALSDRLAVMRGGRILQVGTAGELHQEPTAA HHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure ADSGRRGGQIEMVGLSRRFGDVAAVDGVDLTVQAGEYFCLLGPSGCGKTTALRLISGLD CCCCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCC EPSSGHVRLDGEDLADMPAHRRPVSAVFGGYALFPFLDVAANVAFGLRHARGVTMPGRAE CCCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TSARVRSALAVVQMSEYARRRPPQLSAEQQQRVVLARALVLRPRVLLLDDPLGSQDERLR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH RALRDGLKALQRQVGVTVLHATVDREEALALSDRLAVMRGGRILQVGTAGELHQEPTAA HHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA