| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317416
Identifier: 158317416
GI number: 158317416
Start: 6879838
End: 6881181
Strand: Reverse
Name: 158317416
Synonym: Franean1_5667
Alternate gene names: NA
Gene position: 6881181-6879838 (Counterclockwise)
Preceding gene: 158317417
Following gene: 158317407
Centisome position: 76.61
GC content: 68.82
Gene sequence:
>1344_bases ATGCGAGCGAGATCGCTCGTCGCTGCCGTCGTGCTGTCGTCGTTGGCGCTTGTTGCCTGCGGTAGCCGCGCGAGTGATTC CGGTTCGTCCGACAACGCGCCGACCGGTGGCACGTCGACCAACACCGCATCCGACACCGGGGTGTCGCCGACCGAGATCA AGGTGGGTGTCATCGCGGGGCTGAGTAGCGGCCTCGGCCCTGACACGTTCTCCGCCTCGCTCTACGGCGCGACCGCCTAC TTCGAGGCGCTCAACGCGCGCGGCGGGATCAACGGTCGCAAGATCGACGTGGTCGACTGCGACGACAAGGGCTCCGGTGA CGGCAACGTCGCCTGCGTGCGCAAGCTGATCGACGACGACGAGGTGTTCGCGCTCGCCGGGGTGACGGCCTTCGACTACG CCGGCGCCCAGTACGTGAACTCGAAGGGTGTGCCGGACATCGGCGGCCAGCCGGTGTCCGCGGCGTACGACCAGTACCCG CACCTGTACTCGATCTACGGCAGCTACTACCCGCGGGACGGCCGCCGGCCGGGCTTCGATGGGACGCTGTACGCGGGCAC CGAGAACTACCGCTGGTTCAAGGAGAAGCTCGGCGCCCGGGTGGCCGGTGTCGTCTACTACAACGTCGCCCCGTCACAGC GCTACGCGACCTCGATCGCCGACGGCCTGCGCGCCGAGGGCTACGAGGTCATCGAGGAGCAGATCAACCTCGGCGCGCCG AACTGGGACGCCGCCGTGCAGGACATGAAGCGGCGCGGCGCCCAGGTCGTCTTCGACGCGATGGACGACGGCGGCAACGG CCAGCTCTGCCAGGCGATGCAGCGCCAGGACCTGACCGTGCAGGCGAAGGTGACCACCGCGCAGGGCATGGCGGGCAACA TCGCGCAGATCTACGCGAACTCGCCGCAGTGCCGGAACACCATCTTCGCGACCAGCACGTCGGCGACCTTCTCCGACGAG TCGATCCCCGCGGTCAAGGCGTTCCGGGACGCGGTGGCGGCGCACGTGCCGGCGGACCGCGTCGCGAAGATGAACCAGTG GATGCTCGAGGGCTACGCCTCGGCGCAGTGGCTGGGCGACGCGATGGAGTCCTGCGGGGCGGACCTGACCCGTGAGTGCG TCGAGAAGTTCATGAACCGCTCCGAGCCCTACGACGGTGACGGGCTGCTCATCCCGCGCGGCTTCAGCAAGCTGGCCCAG GCGCCGGCGGAGTCGAAGAACTGCGTGAACGTCGCCCGCTGGCAGGATTCGGCGAACGGCGGCAAGGGCGGTTGGGTCAC CCAGAGCGGTGCCTTGAACAGCACCTGCTTCACGGTGCGCAACCTGCCGTACCCGGCGGCCTGA
Upstream 100 bases:
>100_bases CCGGTGGCGACATGGTCGCTGTCGGTAGCCTGACGCGCGGGGTCCGTGCGGAGCTCGTTGTGCGCGAGCGTCATCCACCA ATCATGAGGAGTGCATGTTC
Downstream 100 bases:
>100_bases CGCCGGCCGGGGCCGTCCGGAAGCACTCCGGACGGCCCCGGACCCGCACCCGGAGAGCCGGCAGGGTCGGCAGGGTCAGA AGAGGATCAGGCGCCGGCGG
Product: putative Leu/Ile/Val/Thr-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA
Sequences:
>Translated_447_residues MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA >Mature_447_residues MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47266; Mature: 47266
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC LSSGLGPDTFSASLYGATAYFEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDD CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC EVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYPHLYSIYGSYYPRDGRRPGFD CEEEEECCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHCCCCCEEHHCCCCCCCCCCCCCC GTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP CEEEECCCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYAN CHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECC SPQCRNTIFATSTSATFSDESIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGD CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQAPAESKNCVNVARWQDSANG HHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCEEHHHCCCCCCC GKGGWVTQSGALNSTCFTVRNLPYPAA CCCCEEECCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC LSSGLGPDTFSASLYGATAYFEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDD CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC EVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYPHLYSIYGSYYPRDGRRPGFD CEEEEECCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHCCCCCEEHHCCCCCCCCCCCCCC GTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP CEEEECCCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYAN CHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECC SPQCRNTIFATSTSATFSDESIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGD CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQAPAESKNCVNVARWQDSANG HHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCEEHHHCCCCCCC GKGGWVTQSGALNSTCFTVRNLPYPAA CCCCEEECCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA