Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317416

Identifier: 158317416

GI number: 158317416

Start: 6879838

End: 6881181

Strand: Reverse

Name: 158317416

Synonym: Franean1_5667

Alternate gene names: NA

Gene position: 6881181-6879838 (Counterclockwise)

Preceding gene: 158317417

Following gene: 158317407

Centisome position: 76.61

GC content: 68.82

Gene sequence:

>1344_bases
ATGCGAGCGAGATCGCTCGTCGCTGCCGTCGTGCTGTCGTCGTTGGCGCTTGTTGCCTGCGGTAGCCGCGCGAGTGATTC
CGGTTCGTCCGACAACGCGCCGACCGGTGGCACGTCGACCAACACCGCATCCGACACCGGGGTGTCGCCGACCGAGATCA
AGGTGGGTGTCATCGCGGGGCTGAGTAGCGGCCTCGGCCCTGACACGTTCTCCGCCTCGCTCTACGGCGCGACCGCCTAC
TTCGAGGCGCTCAACGCGCGCGGCGGGATCAACGGTCGCAAGATCGACGTGGTCGACTGCGACGACAAGGGCTCCGGTGA
CGGCAACGTCGCCTGCGTGCGCAAGCTGATCGACGACGACGAGGTGTTCGCGCTCGCCGGGGTGACGGCCTTCGACTACG
CCGGCGCCCAGTACGTGAACTCGAAGGGTGTGCCGGACATCGGCGGCCAGCCGGTGTCCGCGGCGTACGACCAGTACCCG
CACCTGTACTCGATCTACGGCAGCTACTACCCGCGGGACGGCCGCCGGCCGGGCTTCGATGGGACGCTGTACGCGGGCAC
CGAGAACTACCGCTGGTTCAAGGAGAAGCTCGGCGCCCGGGTGGCCGGTGTCGTCTACTACAACGTCGCCCCGTCACAGC
GCTACGCGACCTCGATCGCCGACGGCCTGCGCGCCGAGGGCTACGAGGTCATCGAGGAGCAGATCAACCTCGGCGCGCCG
AACTGGGACGCCGCCGTGCAGGACATGAAGCGGCGCGGCGCCCAGGTCGTCTTCGACGCGATGGACGACGGCGGCAACGG
CCAGCTCTGCCAGGCGATGCAGCGCCAGGACCTGACCGTGCAGGCGAAGGTGACCACCGCGCAGGGCATGGCGGGCAACA
TCGCGCAGATCTACGCGAACTCGCCGCAGTGCCGGAACACCATCTTCGCGACCAGCACGTCGGCGACCTTCTCCGACGAG
TCGATCCCCGCGGTCAAGGCGTTCCGGGACGCGGTGGCGGCGCACGTGCCGGCGGACCGCGTCGCGAAGATGAACCAGTG
GATGCTCGAGGGCTACGCCTCGGCGCAGTGGCTGGGCGACGCGATGGAGTCCTGCGGGGCGGACCTGACCCGTGAGTGCG
TCGAGAAGTTCATGAACCGCTCCGAGCCCTACGACGGTGACGGGCTGCTCATCCCGCGCGGCTTCAGCAAGCTGGCCCAG
GCGCCGGCGGAGTCGAAGAACTGCGTGAACGTCGCCCGCTGGCAGGATTCGGCGAACGGCGGCAAGGGCGGTTGGGTCAC
CCAGAGCGGTGCCTTGAACAGCACCTGCTTCACGGTGCGCAACCTGCCGTACCCGGCGGCCTGA

Upstream 100 bases:

>100_bases
CCGGTGGCGACATGGTCGCTGTCGGTAGCCTGACGCGCGGGGTCCGTGCGGAGCTCGTTGTGCGCGAGCGTCATCCACCA
ATCATGAGGAGTGCATGTTC

Downstream 100 bases:

>100_bases
CGCCGGCCGGGGCCGTCCGGAAGCACTCCGGACGGCCCCGGACCCGCACCCGGAGAGCCGGCAGGGTCGGCAGGGTCAGA
AGAGGATCAGGCGCCGGCGG

Product: putative Leu/Ile/Val/Thr-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY
FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP
HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP
NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE
SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ
APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA

Sequences:

>Translated_447_residues
MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY
FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP
HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP
NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE
SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ
APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA
>Mature_447_residues
MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAGLSSGLGPDTFSASLYGATAY
FEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDDEVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYP
HLYSIYGSYYPRDGRRPGFDGTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP
NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYANSPQCRNTIFATSTSATFSDE
SIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGDAMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQ
APAESKNCVNVARWQDSANGGKGGWVTQSGALNSTCFTVRNLPYPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47266; Mature: 47266

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
LSSGLGPDTFSASLYGATAYFEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDD
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC
EVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYPHLYSIYGSYYPRDGRRPGFD
CEEEEECCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHCCCCCEEHHCCCCCCCCCCCCCC
GTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP
CEEEECCCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC
NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYAN
CHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECC
SPQCRNTIFATSTSATFSDESIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGD
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQAPAESKNCVNVARWQDSANG
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCEEHHHCCCCCCC
GKGGWVTQSGALNSTCFTVRNLPYPAA
CCCCEEECCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRARSLVAAVVLSSLALVACGSRASDSGSSDNAPTGGTSTNTASDTGVSPTEIKVGVIAG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
LSSGLGPDTFSASLYGATAYFEALNARGGINGRKIDVVDCDDKGSGDGNVACVRKLIDDD
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC
EVFALAGVTAFDYAGAQYVNSKGVPDIGGQPVSAAYDQYPHLYSIYGSYYPRDGRRPGFD
CEEEEECCHHHHHCCCHHHCCCCCCCCCCCCCHHHHHCCCCCEEHHCCCCCCCCCCCCCC
GTLYAGTENYRWFKEKLGARVAGVVYYNVAPSQRYATSIADGLRAEGYEVIEEQINLGAP
CEEEECCCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC
NWDAAVQDMKRRGAQVVFDAMDDGGNGQLCQAMQRQDLTVQAKVTTAQGMAGNIAQIYAN
CHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEECC
SPQCRNTIFATSTSATFSDESIPAVKAFRDAVAAHVPADRVAKMNQWMLEGYASAQWLGD
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AMESCGADLTRECVEKFMNRSEPYDGDGLLIPRGFSKLAQAPAESKNCVNVARWQDSANG
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCCCEEHHHCCCCCCC
GKGGWVTQSGALNSTCFTVRNLPYPAA
CCCCEEECCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA