| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317388
Identifier: 158317388
GI number: 158317388
Start: 6852665
End: 6853459
Strand: Direct
Name: 158317388
Synonym: Franean1_5639
Alternate gene names: NA
Gene position: 6852665-6853459 (Clockwise)
Preceding gene: 158317387
Following gene: 158317391
Centisome position: 76.29
GC content: 74.59
Gene sequence:
>795_bases ATGCGACACACCGACTCCGGCGGCGACGGCGAACCGCTCGTCCTGATCCACGCAGCAGTCTTCGCCGACTGGTTCGTCCC GTTCGAGCGCGAGCCGGCCGTCGCCGGCCTGCGCCGGATCCGCGTCACCCGCACCGGGTACTCGGACCCCGCACCCACCG AGCCGCTGTCAGTGGCCGACCACGCCGCCGAGTGCGCGGACCTGTTGCGCCGCCTCGGGATCGAGCGGGCCCGGGTGCTC GCGCACTCCTCCGGCACCGTGGTCGCGCTACAGCTGGCCCTCGACCACCCGGAGCTGGTCGGCGAACTCGTCCTGGTCGA GCCGCCGCTGATCGACCCGCTCCTGCCGCCGCAGGACCGGGCGACGGTCGCCGCCGCGATCGGCCCCGCCCTGGGCGCGG CGATGGGCGCCGCCGCCCAGGGCGACCTGCGCACCGCCTTCGACACCTTCCTGACGGCGGTGTGCGGACCGCAGCACCGA TCCGTCATCGAGTCCGCCCTCGGCCGAGCCGGCCTGGAACGCGCCGAACGCGACTGCGGCTACTGCTTCACCGGCGAGGT GCCCGCGCTCACCGCGTGGCACTTCGACGAGGAACTGGCACGCCGGATCGAGCAGCCGGTCCATCTCGTCGCCGGCGGCG AGAGCCCACCCTTCACCCACCGCCTCGTCGACCACCTCGCCACGATGCTCCCCGACACCCGCACCACCGTCGTCCCCGGC GAGAACCACCTGCTCCCCCTCTGCGCCCCCACCGCCCTCGCCACCCTCCTCCCCACCCCGACCCCCACCCCCTGA
Upstream 100 bases:
>100_bases CACGACCCCGACGGCATCGAAATCCGCCTCTACGCCGACTGACCCGAGCCACAGACCGAGAACAGTCCAAGAACAACAGA CCCAGAACAGGAGAATCTCC
Downstream 100 bases:
>100_bases CCAGCCCGACCATGCGGCGCGCGCTCCCCCGGCTCAAACCAGGCGACCGTGCCCGCGCTGCTCTCGCCGCTCACCCCGTT CACAGTCCCGGCCAGCGTGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRHTDSGGDGEPLVLIHAAVFADWFVPFEREPAVAGLRRIRVTRTGYSDPAPTEPLSVADHAAECADLLRRLGIERARVL AHSSGTVVALQLALDHPELVGELVLVEPPLIDPLLPPQDRATVAAAIGPALGAAMGAAAQGDLRTAFDTFLTAVCGPQHR SVIESALGRAGLERAERDCGYCFTGEVPALTAWHFDEELARRIEQPVHLVAGGESPPFTHRLVDHLATMLPDTRTTVVPG ENHLLPLCAPTALATLLPTPTPTP
Sequences:
>Translated_264_residues MRHTDSGGDGEPLVLIHAAVFADWFVPFEREPAVAGLRRIRVTRTGYSDPAPTEPLSVADHAAECADLLRRLGIERARVL AHSSGTVVALQLALDHPELVGELVLVEPPLIDPLLPPQDRATVAAAIGPALGAAMGAAAQGDLRTAFDTFLTAVCGPQHR SVIESALGRAGLERAERDCGYCFTGEVPALTAWHFDEELARRIEQPVHLVAGGESPPFTHRLVDHLATMLPDTRTTVVPG ENHLLPLCAPTALATLLPTPTPTP >Mature_264_residues MRHTDSGGDGEPLVLIHAAVFADWFVPFEREPAVAGLRRIRVTRTGYSDPAPTEPLSVADHAAECADLLRRLGIERARVL AHSSGTVVALQLALDHPELVGELVLVEPPLIDPLLPPQDRATVAAAIGPALGAAMGAAAQGDLRTAFDTFLTAVCGPQHR SVIESALGRAGLERAERDCGYCFTGEVPALTAWHFDEELARRIEQPVHLVAGGESPPFTHRLVDHLATMLPDTRTTVVPG ENHLLPLCAPTALATLLPTPTPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28078; Mature: 28078
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTDSGGDGEPLVLIHAAVFADWFVPFEREPAVAGLRRIRVTRTGYSDPAPTEPLSVAD CCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHH HAAECADLLRRLGIERARVLAHSSGTVVALQLALDHPELVGELVLVEPPLIDPLLPPQDR HHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCHHHHCCEEEECCCCCCCCCCCCCC ATVAAAIGPALGAAMGAAAQGDLRTAFDTFLTAVCGPQHRSVIESALGRAGLERAERDCG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC YCFTGEVPALTAWHFDEELARRIEQPVHLVAGGESPPFTHRLVDHLATMLPDTRTTVVPG CEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECC ENHLLPLCAPTALATLLPTPTPTP CCCEEEEEHHHHHHHHCCCCCCCC >Mature Secondary Structure MRHTDSGGDGEPLVLIHAAVFADWFVPFEREPAVAGLRRIRVTRTGYSDPAPTEPLSVAD CCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHH HAAECADLLRRLGIERARVLAHSSGTVVALQLALDHPELVGELVLVEPPLIDPLLPPQDR HHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEECCCHHHHCCEEEECCCCCCCCCCCCCC ATVAAAIGPALGAAMGAAAQGDLRTAFDTFLTAVCGPQHRSVIESALGRAGLERAERDCG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC YCFTGEVPALTAWHFDEELARRIEQPVHLVAGGESPPFTHRLVDHLATMLPDTRTTVVPG CEECCCCCEEEEECCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECC ENHLLPLCAPTALATLLPTPTPTP CCCEEEEEHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA