Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317385

Identifier: 158317385

GI number: 158317385

Start: 6850407

End: 6850832

Strand: Reverse

Name: 158317385

Synonym: Franean1_5636

Alternate gene names: NA

Gene position: 6850832-6850407 (Counterclockwise)

Preceding gene: 158317386

Following gene: 158317379

Centisome position: 76.27

GC content: 74.18

Gene sequence:

>426_bases
GTGTACCTGCGCCGGTGGGCGCCTGGATGCCTCTGGGGGAAGATCTTCATGACGACCATCGCGGACGCCTCGCCGGACCG
GACGGACCAGTCTCCCGCCGCGGTGCGGGAGGAACGGGACCGGGCCCGCCGCCTGATCGACAACGGCCGGGCCACCATGG
CGGTCATCGACACCGTCAGTGACACCGGGGTGCGCGTCGACGGGCGCACCGTCGCCGAGGTGCACCTGCTGGTGGAGCGC
CCAGGCCAGGAGCCCTACCCGGTCACGCGCCGGGCGGTCGTTCCCGTGGACGAGGCGGGCGCGAGCCCGGTGGGTGACGC
CCGGGGCGGTATTCCGAGCCAGCTCCGCCGCCGGGTGCCCGTCCTGGTCGATCCCGCCCGCCCGGACAACGTGCTGCTGC
GATGGGACCTGCGGGTCGCGAGCTGA

Upstream 100 bases:

>100_bases
CCACGGAGCACGAGCCGAAGCAGGTGTCGTCGACCCATTAGTGCCCCCAGGGGGCGGGTGTCGCCGACGCGACCGACAGG
CAGCCCCGTCCGGGTGCAGG

Downstream 100 bases:

>100_bases
GTGACGGGGGAGAGCCGGCGGTCAGCCGGCGAGAGCCGGCGAGGCCGACTTCAGCCGGCCGACTTCAGCCGGCGAGGCCG
ATCTCCTTCAGCAGCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MYLRRWAPGCLWGKIFMTTIADASPDRTDQSPAAVREERDRARRLIDNGRATMAVIDTVSDTGVRVDGRTVAEVHLLVER
PGQEPYPVTRRAVVPVDEAGASPVGDARGGIPSQLRRRVPVLVDPARPDNVLLRWDLRVAS

Sequences:

>Translated_141_residues
MYLRRWAPGCLWGKIFMTTIADASPDRTDQSPAAVREERDRARRLIDNGRATMAVIDTVSDTGVRVDGRTVAEVHLLVER
PGQEPYPVTRRAVVPVDEAGASPVGDARGGIPSQLRRRVPVLVDPARPDNVLLRWDLRVAS
>Mature_141_residues
MYLRRWAPGCLWGKIFMTTIADASPDRTDQSPAAVREERDRARRLIDNGRATMAVIDTVSDTGVRVDGRTVAEVHLLVER
PGQEPYPVTRRAVVPVDEAGASPVGDARGGIPSQLRRRVPVLVDPARPDNVLLRWDLRVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15591; Mature: 15591

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRRWAPGCLWGKIFMTTIADASPDRTDQSPAAVREERDRARRLIDNGRATMAVIDTVS
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
DTGVRVDGRTVAEVHLLVERPGQEPYPVTRRAVVPVDEAGASPVGDARGGIPSQLRRRVP
CCCEEECCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCC
VLVDPARPDNVLLRWDLRVAS
EEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MYLRRWAPGCLWGKIFMTTIADASPDRTDQSPAAVREERDRARRLIDNGRATMAVIDTVS
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
DTGVRVDGRTVAEVHLLVERPGQEPYPVTRRAVVPVDEAGASPVGDARGGIPSQLRRRVP
CCCEEECCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCC
VLVDPARPDNVLLRWDLRVAS
EEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA