Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317338

Identifier: 158317338

GI number: 158317338

Start: 6774235

End: 6775794

Strand: Reverse

Name: 158317338

Synonym: Franean1_5588

Alternate gene names: NA

Gene position: 6775794-6774235 (Counterclockwise)

Preceding gene: 158317340

Following gene: 158317336

Centisome position: 75.44

GC content: 73.78

Gene sequence:

>1560_bases
ATGATCTGGCCCGGTACGTGCATGCACAGGGTCTCTGTGCGGGTGCACCCACAGTTGTGCCATTCTCGGCTACGACATAC
CTCGCGCCCGGATGGGGTGGGCACGGCCGCGGTCGCGAGCGCCGACGACGAAAGGGCTGGACGCGTGCCGCGTTTTAGTC
GGGCCACGGTGACCAGCGCGGTGCTCGCCGTCCTAGCGTTGATCACCGCGGTGACGCTCGTCACGCTCGCCGCCGTCCGT
GATGATCCCGCCGCGTACGCGGCCGGCGGGCCCGGTGACGGCGGGAACGGCGGTGCCGGGAACGGCGATCCCATCGGCCC
CCGCTGGGGTTTCCTGCGCTCCGACGTCGTGTCGCCCGCGGCTCCGCTGGAGCCCCCCGACTCCGCCGCGGCCGGGAGTT
GGCAGGTCGTCGACGCCCTGGCCGAGGCCCGACCGGTGATCTCCCGTACGGCCGTGGGCCGGTACAGCGTGGTTTTCCCC
GGCCTGGGCGTGTCGCGGCGGCGCGGAGTCGCCGTGGCGACCGCGATCGGCGGGCCCGCCGCGGCCGGCCGAACCGGCAC
CGGCCCGAACCCAGCCACGACCGGCGCCGCGGATGCCGACGCCGACGCGCCGTCCGGTGCCGTCACCGACGCGGCCGCGC
CGGCCCACTGCCACATCGTCGACTGGGACGCGGTGGCGCCACCACCGGGCGAGCCCGGCGCGGTGACCGGCGCGCGATCG
GCGTCCGGGCCGCCCGGGCGGCTGGACGAGCGCGTCAACCTGGCCTGCCGCCGTCCGCCCGGAGACTTCGTCGACTCCCG
GTTCAGTCTTCTGTTCACCTACGTGCCCGAGGGCTACCGACCACCGGTCGGGGATCCTCCATATGCGTACGTGCACCTCG
ACCAGGGCGGCCGCGCTGACTCCCGGCCCCGCGACGCCTACAGCGTGTCCGGGCCCGGCATGGTCCAGGTCCACCATCTC
GACACCGGCCGCTATGCCGTCGACCTGGTCGGGTCGGAGTTCGTCCGCCCCGGGAACAACCTCCAGGTCAACGCGGCTGG
TACCTCCGCCGCCGGGTGCAACGTCCTCGGCCGGGAGGTCAAGGCCGACCGGCAGTCCGTCCTGGTCGGCTGCGCCGACG
GCACGACGTTGGCGGACACCCCGTTCGTCCTGCTGTACACCGACCGGAACGCGCTGGTGCCGACCGGCGCGAGCGACTTC
GCGCAGTTGTTCACCGGCATTGTCCGCGACGGCGGACCCCTCGAGCCGGCGCCGCTCGGGGACCCGGTCGACGCCTGGGC
GCGCTACTCGGCGAACAGCGCCGGGTCGGTCAACACGGTGCGGCGCACAGGAGTCGGCGTCTACGAGGTGGTCCTTCCCG
GCGTCGCCGGGACGCCCGACCACCTCAGCGTGACCGCCTACGGCGAGCCGACCTCGAGGTGCTCGGTGGACAACTGGACG
TCGGGCTTCAAGCCGCACGACGTGACCGCCACCGTCCGGTGCGTCGACGGGTCGGGCCGCCCGGTCGACAGCCACGCGAG
CGTGGCCTATGTCAGCGCGGCGAACCTCACCGGCGGCTGA

Upstream 100 bases:

>100_bases
CCGCCCGGCGGCCCGCTTCGGCGCAGCGGCGGGCGCGTAGGGACCCACCGGCCACGGACCGTTTCACCTGCCGCAGCCGC
GCTGATGTGTCGGGTACTTG

Downstream 100 bases:

>100_bases
CGCGCCCCCCGGCCGGACCACCAGACGCAGTCGATGCCCCCGACATCGCCCCCGTTACCGCGTCGGCGGTCCGGCCTACG
CCAGATTGAAGACTGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MIWPGTCMHRVSVRVHPQLCHSRLRHTSRPDGVGTAAVASADDERAGRVPRFSRATVTSAVLAVLALITAVTLVTLAAVR
DDPAAYAAGGPGDGGNGGAGNGDPIGPRWGFLRSDVVSPAAPLEPPDSAAAGSWQVVDALAEARPVISRTAVGRYSVVFP
GLGVSRRRGVAVATAIGGPAAAGRTGTGPNPATTGAADADADAPSGAVTDAAAPAHCHIVDWDAVAPPPGEPGAVTGARS
ASGPPGRLDERVNLACRRPPGDFVDSRFSLLFTYVPEGYRPPVGDPPYAYVHLDQGGRADSRPRDAYSVSGPGMVQVHHL
DTGRYAVDLVGSEFVRPGNNLQVNAAGTSAAGCNVLGREVKADRQSVLVGCADGTTLADTPFVLLYTDRNALVPTGASDF
AQLFTGIVRDGGPLEPAPLGDPVDAWARYSANSAGSVNTVRRTGVGVYEVVLPGVAGTPDHLSVTAYGEPTSRCSVDNWT
SGFKPHDVTATVRCVDGSGRPVDSHASVAYVSAANLTGG

Sequences:

>Translated_519_residues
MIWPGTCMHRVSVRVHPQLCHSRLRHTSRPDGVGTAAVASADDERAGRVPRFSRATVTSAVLAVLALITAVTLVTLAAVR
DDPAAYAAGGPGDGGNGGAGNGDPIGPRWGFLRSDVVSPAAPLEPPDSAAAGSWQVVDALAEARPVISRTAVGRYSVVFP
GLGVSRRRGVAVATAIGGPAAAGRTGTGPNPATTGAADADADAPSGAVTDAAAPAHCHIVDWDAVAPPPGEPGAVTGARS
ASGPPGRLDERVNLACRRPPGDFVDSRFSLLFTYVPEGYRPPVGDPPYAYVHLDQGGRADSRPRDAYSVSGPGMVQVHHL
DTGRYAVDLVGSEFVRPGNNLQVNAAGTSAAGCNVLGREVKADRQSVLVGCADGTTLADTPFVLLYTDRNALVPTGASDF
AQLFTGIVRDGGPLEPAPLGDPVDAWARYSANSAGSVNTVRRTGVGVYEVVLPGVAGTPDHLSVTAYGEPTSRCSVDNWT
SGFKPHDVTATVRCVDGSGRPVDSHASVAYVSAANLTGG
>Mature_519_residues
MIWPGTCMHRVSVRVHPQLCHSRLRHTSRPDGVGTAAVASADDERAGRVPRFSRATVTSAVLAVLALITAVTLVTLAAVR
DDPAAYAAGGPGDGGNGGAGNGDPIGPRWGFLRSDVVSPAAPLEPPDSAAAGSWQVVDALAEARPVISRTAVGRYSVVFP
GLGVSRRRGVAVATAIGGPAAAGRTGTGPNPATTGAADADADAPSGAVTDAAAPAHCHIVDWDAVAPPPGEPGAVTGARS
ASGPPGRLDERVNLACRRPPGDFVDSRFSLLFTYVPEGYRPPVGDPPYAYVHLDQGGRADSRPRDAYSVSGPGMVQVHHL
DTGRYAVDLVGSEFVRPGNNLQVNAAGTSAAGCNVLGREVKADRQSVLVGCADGTTLADTPFVLLYTDRNALVPTGASDF
AQLFTGIVRDGGPLEPAPLGDPVDAWARYSANSAGSVNTVRRTGVGVYEVVLPGVAGTPDHLSVTAYGEPTSRCSVDNWT
SGFKPHDVTATVRCVDGSGRPVDSHASVAYVSAANLTGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52985; Mature: 52985

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWPGTCMHRVSVRVHPQLCHSRLRHTSRPDGVGTAAVASADDERAGRVPRFSRATVTSA
CCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCCCCHHHHHHHH
VLAVLALITAVTLVTLAAVRDDPAAYAAGGPGDGGNGGAGNGDPIGPRWGFLRSDVVSPA
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
APLEPPDSAAAGSWQVVDALAEARPVISRTAVGRYSVVFPGLGVSRRRGVAVATAIGGPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCC
AAGRTGTGPNPATTGAADADADAPSGAVTDAAAPAHCHIVDWDAVAPPPGEPGAVTGARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ASGPPGRLDERVNLACRRPPGDFVDSRFSLLFTYVPEGYRPPVGDPPYAYVHLDQGGRAD
CCCCCCCCCCCCCEEEECCCCHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
SRPRDAYSVSGPGMVQVHHLDTGRYAVDLVGSEFVRPGNNLQVNAAGTSAAGCNVLGREV
CCCCCCEECCCCCEEEEEEECCCCEEEEECCHHHCCCCCCEEEEECCCCCCCCHHHHHHH
KADRQSVLVGCADGTTLADTPFVLLYTDRNALVPTGASDFAQLFTGIVRDGGPLEPAPLG
HCCCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
DPVDAWARYSANSAGSVNTVRRTGVGVYEVVLPGVAGTPDHLSVTAYGEPTSRCSVDNWT
CCHHHHHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
SGFKPHDVTATVRCVDGSGRPVDSHASVAYVSAANLTGG
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MIWPGTCMHRVSVRVHPQLCHSRLRHTSRPDGVGTAAVASADDERAGRVPRFSRATVTSA
CCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCCCCHHHHHHHH
VLAVLALITAVTLVTLAAVRDDPAAYAAGGPGDGGNGGAGNGDPIGPRWGFLRSDVVSPA
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
APLEPPDSAAAGSWQVVDALAEARPVISRTAVGRYSVVFPGLGVSRRRGVAVATAIGGPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCC
AAGRTGTGPNPATTGAADADADAPSGAVTDAAAPAHCHIVDWDAVAPPPGEPGAVTGARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ASGPPGRLDERVNLACRRPPGDFVDSRFSLLFTYVPEGYRPPVGDPPYAYVHLDQGGRAD
CCCCCCCCCCCCCEEEECCCCHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
SRPRDAYSVSGPGMVQVHHLDTGRYAVDLVGSEFVRPGNNLQVNAAGTSAAGCNVLGREV
CCCCCCEECCCCCEEEEEEECCCCEEEEECCHHHCCCCCCEEEEECCCCCCCCHHHHHHH
KADRQSVLVGCADGTTLADTPFVLLYTDRNALVPTGASDFAQLFTGIVRDGGPLEPAPLG
HCCCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
DPVDAWARYSANSAGSVNTVRRTGVGVYEVVLPGVAGTPDHLSVTAYGEPTSRCSVDNWT
CCHHHHHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
SGFKPHDVTATVRCVDGSGRPVDSHASVAYVSAANLTGG
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA