Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317330

Identifier: 158317330

GI number: 158317330

Start: 6760126

End: 6761490

Strand: Reverse

Name: 158317330

Synonym: Franean1_5580

Alternate gene names: NA

Gene position: 6761490-6760126 (Counterclockwise)

Preceding gene: 158317331

Following gene: 158317329

Centisome position: 75.28

GC content: 73.11

Gene sequence:

>1365_bases
GTGCGCATCTCACCGGTTACGGAGGCGGCAGGCGGATTGTCCGCCGCCGTCCGCCGCCGGCGCACACGGCGCCGGCCTCA
CCTGGCGAGCCGTCAACGGACGCGCCTGTTCACGCGCCTGCGGACTCGCCTCCGGACCCTGCCGATCGTGCTCGCGGCGC
TGCTCGTGGCCGCCGGGTGTGTCTCGTGCGTGTCCTGGAACGACTCGTCCGATGCCACGGACTCGCACGGTTCGGGTGCC
TCGTGCCCGCCCGTGCCGGGGGTCACGGCGGACGAGGTCCGGCTCGGCCTGCTGTTCCCGAACACCGGCAACGCGGCGTC
GTTGTTCGACCCGTTCCGGGCCGGGGTCGACGCCCGGCTCGGGGTGGCGAACGCGGCCGGTGGGGTCCAGGGGCGGAGCA
TCGAGTACTCGTGGCGCGACGACGAATCGCAGCCCAGCGTCAACGAGACCGCGGCCCGCATGCTCGTCGACCAGCACCAG
GTGTTCGGGATCGTCGAGTCCACCACGGCCGCGGCCGGCTCGGCGGAGTTCCTGCACAGCCGCGGCATCCCGGTCACCGG
AACGTCGCTGGAGGCGTCCTGGACCACCTTCGACAACATGTTCAGCTACTCGAACATGATCGCGGACGGTGCCTCGGTGT
CGACCTGGGGTGACTTCGTCGCCGAGCGCGGGGGGACGACGGCGCTGATCGCCGCGTCGAGCTTCTCGGCCGCCTCGGGC
GCCTTCGGCGAGGAGCTGGCCGCCAGCCTGGAGGCGGCCGGGGTGCGGGTCGTCGGCACCCTCGACGCGACCGGGCCGAT
CGACTTCGCCGACGTCGGCGCGCAGGTGCGTGACAGCGGCGCCGACACGCTCGTCGGGGCGGTCACGGGGGCCGCGTTCG
GCCAGGTCGTGCTGGGCGCCCGGGGGGCCGGGGCCAACCTGCGGGTGATCCTCTCGCCGTCCGGGTACGACCAGAGCCTG
CTGGACGTCTTCGGCCGGGTGCTGAGCGGCGTCTACATCTTCGTCGACTACCAGCCGTTCGAGCTCGACACGCCGGGCCA
CCGCGCCTTCCTCGACGCGATGACGCGGTACGCCCCGTACCTGCAGTCGCCGAACAGGCAGGCCGCGCTCTCCGGCTGGA
TCTCGACCGACATGTTCCTGCGCGGGCTGGCCGAGGCCGGCCGGTGCCCGACCCGGGAGCGCTTCATCGAGGGGCTGCGC
GCCGTCCGCGACTACGCCGCCGACGGGCTGCTGCCGGCGCCCATCGACTTCACGGCCTCCTTCGGTCAGCTCGGCCGGTG
CTACACCTTCCTTCAGGTGGCTCCCGACGCGAGCCGCTTCGACGTGCTCCGGCCGGCACCGCGCTGCGGCCGGCTCGAGC
ACTGA

Upstream 100 bases:

>100_bases
TACTTGCCAAAAAGTTGCGTCCAGGCTGACCCAACGGTCGAATTTCACAGAAACAACGGATAGCTGTGGTGCGGTGACCA
TCCTGGGTCACTGTGGTGCT

Downstream 100 bases:

>100_bases
CCCGCGGCCCGGCCGGCGGCACCGGCGTCAGCATCCCGACGGCCGGCCTTCTGACGGCCGGCCTTCTGACGACCGGCCGT
TGTGTAAAGAGTCCGTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRISPVTEAAGGLSAAVRRRRTRRRPHLASRQRTRLFTRLRTRLRTLPIVLAALLVAAGCVSCVSWNDSSDATDSHGSGA
SCPPVPGVTADEVRLGLLFPNTGNAASLFDPFRAGVDARLGVANAAGGVQGRSIEYSWRDDESQPSVNETAARMLVDQHQ
VFGIVESTTAAAGSAEFLHSRGIPVTGTSLEASWTTFDNMFSYSNMIADGASVSTWGDFVAERGGTTALIAASSFSAASG
AFGEELAASLEAAGVRVVGTLDATGPIDFADVGAQVRDSGADTLVGAVTGAAFGQVVLGARGAGANLRVILSPSGYDQSL
LDVFGRVLSGVYIFVDYQPFELDTPGHRAFLDAMTRYAPYLQSPNRQAALSGWISTDMFLRGLAEAGRCPTRERFIEGLR
AVRDYAADGLLPAPIDFTASFGQLGRCYTFLQVAPDASRFDVLRPAPRCGRLEH

Sequences:

>Translated_454_residues
MRISPVTEAAGGLSAAVRRRRTRRRPHLASRQRTRLFTRLRTRLRTLPIVLAALLVAAGCVSCVSWNDSSDATDSHGSGA
SCPPVPGVTADEVRLGLLFPNTGNAASLFDPFRAGVDARLGVANAAGGVQGRSIEYSWRDDESQPSVNETAARMLVDQHQ
VFGIVESTTAAAGSAEFLHSRGIPVTGTSLEASWTTFDNMFSYSNMIADGASVSTWGDFVAERGGTTALIAASSFSAASG
AFGEELAASLEAAGVRVVGTLDATGPIDFADVGAQVRDSGADTLVGAVTGAAFGQVVLGARGAGANLRVILSPSGYDQSL
LDVFGRVLSGVYIFVDYQPFELDTPGHRAFLDAMTRYAPYLQSPNRQAALSGWISTDMFLRGLAEAGRCPTRERFIEGLR
AVRDYAADGLLPAPIDFTASFGQLGRCYTFLQVAPDASRFDVLRPAPRCGRLEH
>Mature_454_residues
MRISPVTEAAGGLSAAVRRRRTRRRPHLASRQRTRLFTRLRTRLRTLPIVLAALLVAAGCVSCVSWNDSSDATDSHGSGA
SCPPVPGVTADEVRLGLLFPNTGNAASLFDPFRAGVDARLGVANAAGGVQGRSIEYSWRDDESQPSVNETAARMLVDQHQ
VFGIVESTTAAAGSAEFLHSRGIPVTGTSLEASWTTFDNMFSYSNMIADGASVSTWGDFVAERGGTTALIAASSFSAASG
AFGEELAASLEAAGVRVVGTLDATGPIDFADVGAQVRDSGADTLVGAVTGAAFGQVVLGARGAGANLRVILSPSGYDQSL
LDVFGRVLSGVYIFVDYQPFELDTPGHRAFLDAMTRYAPYLQSPNRQAALSGWISTDMFLRGLAEAGRCPTRERFIEGLR
AVRDYAADGLLPAPIDFTASFGQLGRCYTFLQVAPDASRFDVLRPAPRCGRLEH

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48019; Mature: 48019

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISPVTEAAGGLSAAVRRRRTRRRPHLASRQRTRLFTRLRTRLRTLPIVLAALLVAAGC
CCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSCVSWNDSSDATDSHGSGASCPPVPGVTADEVRLGLLFPNTGNAASLFDPFRAGVDARL
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHCCCCCCC
GVANAAGGVQGRSIEYSWRDDESQPSVNETAARMLVDQHQVFGIVESTTAAAGSAEFLHS
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHCCCCCHHHHHH
RGIPVTGTSLEASWTTFDNMFSYSNMIADGASVSTWGDFVAERGGTTALIAASSFSAASG
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCC
AFGEELAASLEAAGVRVVGTLDATGPIDFADVGAQVRDSGADTLVGAVTGAAFGQVVLGA
CHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHEEC
RGAGANLRVILSPSGYDQSLLDVFGRVLSGVYIFVDYQPFELDTPGHRAFLDAMTRYAPY
CCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
LQSPNRQAALSGWISTDMFLRGLAEAGRCPTRERFIEGLRAVRDYAADGLLPAPIDFTAS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
FGQLGRCYTFLQVAPDASRFDVLRPAPRCGRLEH
HHHHHHHEEHEEECCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRISPVTEAAGGLSAAVRRRRTRRRPHLASRQRTRLFTRLRTRLRTLPIVLAALLVAAGC
CCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSCVSWNDSSDATDSHGSGASCPPVPGVTADEVRLGLLFPNTGNAASLFDPFRAGVDARL
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHCCCCCCC
GVANAAGGVQGRSIEYSWRDDESQPSVNETAARMLVDQHQVFGIVESTTAAAGSAEFLHS
CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHCCCCCHHHHHH
RGIPVTGTSLEASWTTFDNMFSYSNMIADGASVSTWGDFVAERGGTTALIAASSFSAASG
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCC
AFGEELAASLEAAGVRVVGTLDATGPIDFADVGAQVRDSGADTLVGAVTGAAFGQVVLGA
CHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHEEC
RGAGANLRVILSPSGYDQSLLDVFGRVLSGVYIFVDYQPFELDTPGHRAFLDAMTRYAPY
CCCCCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
LQSPNRQAALSGWISTDMFLRGLAEAGRCPTRERFIEGLRAVRDYAADGLLPAPIDFTAS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
FGQLGRCYTFLQVAPDASRFDVLRPAPRCGRLEH
HHHHHHHEEHEEECCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA