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The map label for this gene is yoaJ [H]

Identifier: 158317309

GI number: 158317309

Start: 6733734

End: 6734615

Strand: Direct

Name: yoaJ [H]

Synonym: Franean1_5557

Alternate gene names: 158317309

Gene position: 6733734-6734615 (Clockwise)

Preceding gene: 158317307

Following gene: 158317310

Centisome position: 74.97

GC content: 72.34

Gene sequence:

>882_bases
ATGTCCCCCGCCCCAGGTTTCGTCTCGCCGGTTCGGCGTGCCCTGCTCGGCATGGCGGTGGCGGCCGCCACCGCCGTCCT
CGCCACCGGCTGCCAACCGGCGGTCGGCGGTGGTCCGCCGGAGCCCGACCCGGTCAGCACCGCGACCGCGGCGTCTACGC
CCGGTCCGTCGTCCACGCCCACCGGTCCGTCGGCGCCGCCCGGCCGGCCTTCGGTGACAGGCGCGCCGGCGCCGGGCGCA
CCGGCAGGGCCGACAACCGTGCCGGTCACACCCGGCCGTATCCAGCCGGGTGTGGTCCGCACCGGTCCGGCGACGCACTA
CGGCGCGGACGGCGGCGGCAACTGCATGTTCGACCGCCTGACCGACCCGGCCATGCCGGTAGTGGCGATGAACGAGCTCG
ACTACGAGACGGCCCGCGCCTGCGGCGCGTACATCGAGGTCACCGGACCCGGTGGCACCACGGTCGTGAAGGTCACCGAC
CGGTGCCCGGAGTGCGGTCCTGGTCATCTCGACCTGAGCCAGCAGGCCTTCGCCCGGATCGCCGGCGGCGTGCCCGGGCT
GGTCGACGTCACCTGGCGGCTGGTGAGCCCGGCCGACATCGGATCCGTCCAGTTCCGGGTCAAGGAGGGGTCGTCGGCCT
ACTGGCTGGCAATTCAGGTCCGCAACCATCGCAATCCGGTCGTCTCACTCGAGGTTCGGGTGAACGGGGCCTGGACGGCG
CTGCCGCGGGAGATGTGGAACTACTTCGTGGCACCGCAGGGTCTCGGTCCGGGGCCGTTCACCGTGCGGATCACCGACGT
TTACGGCGAGCAGCTTGTCGAGACCGTGAACCTTGCACCCGCCTCGGTGCAGACGACGGGCAGCCAGTTCGCCCGGCACT
GA

Upstream 100 bases:

>100_bases
CGCTCGACGGCTGATCGCGACACCCGCTAGCGTGCGAGGTCCGGGGAGGGGCAGAGCGGCGCCGGCTGTCGTCGGCGCTC
CGGCCACGGAGGTAGTTCCG

Downstream 100 bases:

>100_bases
CCAACCGCCGACGGAACCAACCGTGGCGCGGCGGACTGGGGGCCACCGCGCCACGGCAGGCCGGCGGACGGACAGGCAAA
CAGCTCGGCGGGCAGGCGGG

Product: rare lipoprotein A

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSPAPGFVSPVRRALLGMAVAAATAVLATGCQPAVGGGPPEPDPVSTATAASTPGPSSTPTGPSAPPGRPSVTGAPAPGA
PAGPTTVPVTPGRIQPGVVRTGPATHYGADGGGNCMFDRLTDPAMPVVAMNELDYETARACGAYIEVTGPGGTTVVKVTD
RCPECGPGHLDLSQQAFARIAGGVPGLVDVTWRLVSPADIGSVQFRVKEGSSAYWLAIQVRNHRNPVVSLEVRVNGAWTA
LPREMWNYFVAPQGLGPGPFTVRITDVYGEQLVETVNLAPASVQTTGSQFARH

Sequences:

>Translated_293_residues
MSPAPGFVSPVRRALLGMAVAAATAVLATGCQPAVGGGPPEPDPVSTATAASTPGPSSTPTGPSAPPGRPSVTGAPAPGA
PAGPTTVPVTPGRIQPGVVRTGPATHYGADGGGNCMFDRLTDPAMPVVAMNELDYETARACGAYIEVTGPGGTTVVKVTD
RCPECGPGHLDLSQQAFARIAGGVPGLVDVTWRLVSPADIGSVQFRVKEGSSAYWLAIQVRNHRNPVVSLEVRVNGAWTA
LPREMWNYFVAPQGLGPGPFTVRITDVYGEQLVETVNLAPASVQTTGSQFARH
>Mature_292_residues
SPAPGFVSPVRRALLGMAVAAATAVLATGCQPAVGGGPPEPDPVSTATAASTPGPSSTPTGPSAPPGRPSVTGAPAPGAP
AGPTTVPVTPGRIQPGVVRTGPATHYGADGGGNCMFDRLTDPAMPVVAMNELDYETARACGAYIEVTGPGGTTVVKVTDR
CPECGPGHLDLSQQAFARIAGGVPGLVDVTWRLVSPADIGSVQFRVKEGSSAYWLAIQVRNHRNPVVSLEVRVNGAWTAL
PREMWNYFVAPQGLGPGPFTVRITDVYGEQLVETVNLAPASVQTTGSQFARH

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 29935; Mature: 29804

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAPGFVSPVRRALLGMAVAAATAVLATGCQPAVGGGPPEPDPVSTATAASTPGPSSTP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPSAPPGRPSVTGAPAPGAPAGPTTVPVTPGRIQPGVVRTGPATHYGADGGGNCMFDRL
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEECC
TDPAMPVVAMNELDYETARACGAYIEVTGPGGTTVVKVTDRCPECGPGHLDLSQQAFARI
CCCCCCEEEECCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AGGVPGLVDVTWRLVSPADIGSVQFRVKEGSSAYWLAIQVRNHRNPVVSLEVRVNGAWTA
HCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCEEH
LPREMWNYFVAPQGLGPGPFTVRITDVYGEQLVETVNLAPASVQTTGSQFARH
HHHHHHHHEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHHCC
>Mature Secondary Structure 
SPAPGFVSPVRRALLGMAVAAATAVLATGCQPAVGGGPPEPDPVSTATAASTPGPSSTP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPSAPPGRPSVTGAPAPGAPAGPTTVPVTPGRIQPGVVRTGPATHYGADGGGNCMFDRL
CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEECC
TDPAMPVVAMNELDYETARACGAYIEVTGPGGTTVVKVTDRCPECGPGHLDLSQQAFARI
CCCCCCEEEECCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AGGVPGLVDVTWRLVSPADIGSVQFRVKEGSSAYWLAIQVRNHRNPVVSLEVRVNGAWTA
HCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCEEH
LPREMWNYFVAPQGLGPGPFTVRITDVYGEQLVETVNLAPASVQTTGSQFARH
HHHHHHHHEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]