Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317283

Identifier: 158317283

GI number: 158317283

Start: 6699468

End: 6700640

Strand: Direct

Name: 158317283

Synonym: Franean1_5531

Alternate gene names: NA

Gene position: 6699468-6700640 (Clockwise)

Preceding gene: 158317282

Following gene: 158317284

Centisome position: 74.59

GC content: 47.49

Gene sequence:

>1173_bases
ATGGTAGAAATCTACGACGATAGTACTGACTGGTTGGATTCCGAGGAAGGCCTTGACGAAGATGGCCAGATTGATGAGTA
TGATCTTACTTCTACGCCCAACGATTTCAACGTTCTGACCATACAAAGTTTCATCGAATCCGGGTCGGTAAAGATTCCGG
GATTTCAGCGAAACTACGTCTGGGACCTTAAGCGGGCGTCGAAACTAATCGAGTCGATTGTCATTGGCCTTCCGGTTCCT
CAGGTATTTCTCTACGAGGAGGGGCGAAATTCGTTTCTGGTGATCGATGGCCAGCAGCGTCTAATGACAATCTATTACTT
CGTAAGGCAGCGATTTCCAAGAAAAGAGAAAAGGGCCCAAATTCGCAAGGTCTTTAATGAGCATGGACGCGTTCCAGATG
AAGTGCTTTACGATGAAGAACTATTTGAAAATTTCAACCTAAGGCTGCCCGAAGTATCGCCGGGAAAGCCAAATAAATTC
TCTGGACTCAACTATGCCCGCCTAGGCGACTATCAAACCCAATTCAATCTTCGTACAATTCGAAATGTCATCATAAAGCA
AGTCTCGCCAGACAATGACAATTCTTCGATATATGAAATATTCAACCGCCTGAATACCGGAGGAATAAATCTCACTCCGC
AGGAGATTCGGGCGAGCCTGTATCACTCGAAGTTCTACGACATGCTATTTCGAGTGAATATGAATCCAGTATGGAGGAAC
ATCGTCGGTCCCGGCGAGCCCGACCTCCACGTGCGTGACCTCGAGGTGCTGTTGCGAGCGGTAGCTATGTGGGAGCAGGG
CGGCAACTATACGCCGTCGATGGTGAGATTCCTGAACAATTATTCGAATCGCGCGAAATCTTATTCGCCGAGCGAAGTTG
AGCAGGTAGAGGAAACTCTGACCTGGTTTTTTGATCTAGCGAGGAACATTCCGCGGTCAGCCTTCACTTCCCGTGCAAAC
AACAAATTCAGCACACCGTTGTTCGAGTCTGTATTTGCTGCTGTATGTAACAGAAAAAGCCCAAGGAAAGATGTTTCGCT
AGAAGCGTCGACGGTCGAGGCAATCAAAAATGACCCCGATTTTCTTCGCTATACTACCCAGAGAACCACTGATACCTCCA
ACGTAAAGGGTCGCCTAAGTGTAGCGATGAAATACGTTGACCGCTATGTCTGA

Upstream 100 bases:

>100_bases
CCCGCACCACACGAAGCCCCAAACGGGTCGCCGCTGATGGGTGGCTGCGCGCCATAAGCTATTGTCCTAACCAAGATCTC
CGCACTGGAAAGGGACTTCA

Downstream 100 bases:

>100_bases
AGATAATTCGACGCGGGAACCAAGCTTGGTTGAGAAGCTAAGTGGCGAGTACTCTGCGATCGCCAAATATCTCGAAGAGA
ATAGCGAGATATCGTTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MVEIYDDSTDWLDSEEGLDEDGQIDEYDLTSTPNDFNVLTIQSFIESGSVKIPGFQRNYVWDLKRASKLIESIVIGLPVP
QVFLYEEGRNSFLVIDGQQRLMTIYYFVRQRFPRKEKRAQIRKVFNEHGRVPDEVLYDEELFENFNLRLPEVSPGKPNKF
SGLNYARLGDYQTQFNLRTIRNVIIKQVSPDNDNSSIYEIFNRLNTGGINLTPQEIRASLYHSKFYDMLFRVNMNPVWRN
IVGPGEPDLHVRDLEVLLRAVAMWEQGGNYTPSMVRFLNNYSNRAKSYSPSEVEQVEETLTWFFDLARNIPRSAFTSRAN
NKFSTPLFESVFAAVCNRKSPRKDVSLEASTVEAIKNDPDFLRYTTQRTTDTSNVKGRLSVAMKYVDRYV

Sequences:

>Translated_390_residues
MVEIYDDSTDWLDSEEGLDEDGQIDEYDLTSTPNDFNVLTIQSFIESGSVKIPGFQRNYVWDLKRASKLIESIVIGLPVP
QVFLYEEGRNSFLVIDGQQRLMTIYYFVRQRFPRKEKRAQIRKVFNEHGRVPDEVLYDEELFENFNLRLPEVSPGKPNKF
SGLNYARLGDYQTQFNLRTIRNVIIKQVSPDNDNSSIYEIFNRLNTGGINLTPQEIRASLYHSKFYDMLFRVNMNPVWRN
IVGPGEPDLHVRDLEVLLRAVAMWEQGGNYTPSMVRFLNNYSNRAKSYSPSEVEQVEETLTWFFDLARNIPRSAFTSRAN
NKFSTPLFESVFAAVCNRKSPRKDVSLEASTVEAIKNDPDFLRYTTQRTTDTSNVKGRLSVAMKYVDRYV
>Mature_390_residues
MVEIYDDSTDWLDSEEGLDEDGQIDEYDLTSTPNDFNVLTIQSFIESGSVKIPGFQRNYVWDLKRASKLIESIVIGLPVP
QVFLYEEGRNSFLVIDGQQRLMTIYYFVRQRFPRKEKRAQIRKVFNEHGRVPDEVLYDEELFENFNLRLPEVSPGKPNKF
SGLNYARLGDYQTQFNLRTIRNVIIKQVSPDNDNSSIYEIFNRLNTGGINLTPQEIRASLYHSKFYDMLFRVNMNPVWRN
IVGPGEPDLHVRDLEVLLRAVAMWEQGGNYTPSMVRFLNNYSNRAKSYSPSEVEQVEETLTWFFDLARNIPRSAFTSRAN
NKFSTPLFESVFAAVCNRKSPRKDVSLEASTVEAIKNDPDFLRYTTQRTTDTSNVKGRLSVAMKYVDRYV

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45288; Mature: 45288

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIYDDSTDWLDSEEGLDEDGQIDEYDLTSTPNDFNVLTIQSFIESGSVKIPGFQRNYV
CEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEHHHHHHCCCEECCCCCCCHH
WDLKRASKLIESIVIGLPVPQVFLYEEGRNSFLVIDGQQRLMTIYYFVRQRFPRKEKRAQ
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHH
IRKVFNEHGRVPDEVLYDEELFENFNLRLPEVSPGKPNKFSGLNYARLGDYQTQFNLRTI
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
RNVIIKQVSPDNDNSSIYEIFNRLNTGGINLTPQEIRASLYHSKFYDMLFRVNMNPVWRN
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IVGPGEPDLHVRDLEVLLRAVAMWEQGGNYTPSMVRFLNNYSNRAKSYSPSEVEQVEETL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TWFFDLARNIPRSAFTSRANNKFSTPLFESVFAAVCNRKSPRKDVSLEASTVEAIKNDPD
HHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCH
FLRYTTQRTTDTSNVKGRLSVAMKYVDRYV
HHEEECCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEIYDDSTDWLDSEEGLDEDGQIDEYDLTSTPNDFNVLTIQSFIESGSVKIPGFQRNYV
CEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEHHHHHHCCCEECCCCCCCHH
WDLKRASKLIESIVIGLPVPQVFLYEEGRNSFLVIDGQQRLMTIYYFVRQRFPRKEKRAQ
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHH
IRKVFNEHGRVPDEVLYDEELFENFNLRLPEVSPGKPNKFSGLNYARLGDYQTQFNLRTI
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
RNVIIKQVSPDNDNSSIYEIFNRLNTGGINLTPQEIRASLYHSKFYDMLFRVNMNPVWRN
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IVGPGEPDLHVRDLEVLLRAVAMWEQGGNYTPSMVRFLNNYSNRAKSYSPSEVEQVEETL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TWFFDLARNIPRSAFTSRANNKFSTPLFESVFAAVCNRKSPRKDVSLEASTVEAIKNDPD
HHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCH
FLRYTTQRTTDTSNVKGRLSVAMKYVDRYV
HHEEECCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA