| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317277
Identifier: 158317277
GI number: 158317277
Start: 6693097
End: 6693507
Strand: Reverse
Name: 158317277
Synonym: Franean1_5525
Alternate gene names: NA
Gene position: 6693507-6693097 (Counterclockwise)
Preceding gene: 158317278
Following gene: 158317276
Centisome position: 74.52
GC content: 70.8
Gene sequence:
>411_bases GTGGCGGTTCCGCAACGCATTCCGGTGCGGTTCGAGGACGTGTTCCCGCACGGTGCGTTCGTGCTGGGCGTGGAGGCGGC GAGCGACTTCGACAAGGTGAGAGAGAAGGCGGCGGACGTCCAGGCTCGGGACAAGGACACCGGCGAACGGGTCTGGTCGG TGCGGGTCCTGGATGCGGACCCGATGGCCCGGAAGGCCGAACTGAAGGTGAAGATCCTCGGGGAGGCGGCACCGGTCCTG CCGGACAACCTGCCGGGGCTCCCGTTCCGGCCGGTGATGTTCGAACGCCTGGTGGTGGTCCCGTACGTGGACACCAACGG GTCGCAGCCGCGGGTGGCGTTCTCGCTGCGGGCGGGCGTGATGCGGCCGGTCGGTCCGGCTCGGCGGACCAACCCGGGGG TGGCGGCGTGA
Upstream 100 bases:
>100_bases TGGGTTAGCGGTTGATACGCGCTTGCTGAGCGGTGGATCGTGTATCTCGTCAGCCGGAACGCACGGTTGGTTCCGGGTAA AGGCGAGTGGAGGTGGCACG
Downstream 100 bases:
>100_bases GCGGGCGCGAGATGGACGGGCTGCGCTCGTCGACGCACCTGGGGCTGCACGTGGGCGCGGACTGGTCGGCCCGCTGCCAC ACCTACCCGGACAAGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MAVPQRIPVRFEDVFPHGAFVLGVEAASDFDKVREKAADVQARDKDTGERVWSVRVLDADPMARKAELKVKILGEAAPVL PDNLPGLPFRPVMFERLVVVPYVDTNGSQPRVAFSLRAGVMRPVGPARRTNPGVAA
Sequences:
>Translated_136_residues MAVPQRIPVRFEDVFPHGAFVLGVEAASDFDKVREKAADVQARDKDTGERVWSVRVLDADPMARKAELKVKILGEAAPVL PDNLPGLPFRPVMFERLVVVPYVDTNGSQPRVAFSLRAGVMRPVGPARRTNPGVAA >Mature_135_residues AVPQRIPVRFEDVFPHGAFVLGVEAASDFDKVREKAADVQARDKDTGERVWSVRVLDADPMARKAELKVKILGEAAPVLP DNLPGLPFRPVMFERLVVVPYVDTNGSQPRVAFSLRAGVMRPVGPARRTNPGVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14856; Mature: 14725
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPQRIPVRFEDVFPHGAFVLGVEAASDFDKVREKAADVQARDKDTGERVWSVRVLDAD CCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC PMARKAELKVKILGEAAPVLPDNLPGLPFRPVMFERLVVVPYVDTNGSQPRVAFSLRAGV CCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCCCEEEEEECCCC MRPVGPARRTNPGVAA CCCCCCCCCCCCCCCC >Mature Secondary Structure AVPQRIPVRFEDVFPHGAFVLGVEAASDFDKVREKAADVQARDKDTGERVWSVRVLDAD CCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC PMARKAELKVKILGEAAPVLPDNLPGLPFRPVMFERLVVVPYVDTNGSQPRVAFSLRAGV CCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCCCEEEEEECCCC MRPVGPARRTNPGVAA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA