Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317249

Identifier: 158317249

GI number: 158317249

Start: 6652035

End: 6653525

Strand: Reverse

Name: 158317249

Synonym: Franean1_5496

Alternate gene names: NA

Gene position: 6653525-6652035 (Counterclockwise)

Preceding gene: 158317256

Following gene: 158317248

Centisome position: 74.08

GC content: 73.78

Gene sequence:

>1491_bases
GTGGACGTTCTGTCGGATGAGGGTCAGCTCGCGCCGGCGCCCCGCCCGCCCGGGGCGCATCGGCCGGCGGCCGCGGGCCG
ATGGTCGAGGTCCGGAGGGCGCCCCGGCAGGGGCCGCCTGGCCGGGTCCGGCCAGCTCCCGACACAGGGGCCATCGGATC
CCGGCGCGCGGTCCGCGGTACCGCCCCGGCTCGCGCCGGCCGGGCGGGCGTGGTGGATCGGCCTGCTGGTAGTGGTCGCC
GTCGGTCTCGGTGTCCGCCTCGGCTACCTGTTCGGATGGATGCATCCCGCGGTCGTCGACGGTGACCCTTTCTATTACCA
CCAGGCCGCGAACCTGTTCGCGGACGGGCACGGCTGGCCCGATCCGTACGAGTTGAGGTACTTCGACAGATACGTCCCGG
ACGCGCAGCACCCACCACTGACGAGTGCGCTGCTCGCCATCCCGTCCGTGCTGGGCTTCACCGGGTTCCTGTCGCACCAG
ATCTTCTCGTGTCTGCTCGGTGCGGTGTCGGTCGGCGTCGTCGGCCTGGTAGGCCGCCGCGCCGCCGGCCCGGCCACCGG
CCTGCTCGCCGCCGGCATCGCGGCGCTCTACCCGGGGATGTGGCTCAACGACGCCCTGGTGATGTCCGAGACCACCGGAA
TCCTGACCTGCGCCCTGCTGATCGCCGCGGCCCACCGCTTCTGGGACCGGCGGACCGTGGCGGACGCCTGCTGGCTCGGC
GCGGCGCTGGCCGCCGCGATGCTCGCCCGCGCCGAGCTCGCGCTGCTCGCCCTGGTGCTCGTGGTGCCCCTGATCGCGAT
GAGCCGTCCGCTGCCGTGGCGTCGCCGCCTCGGCCTGCTCGCGGCCGCCGCCGGCACGAGCGTCGCCGTGGTGGCCCCCT
GGACGGCCTACAACCTGTCCCGGTTCGAGGAGCCCGAGTTCCTCTCGACCGGCCTCGGCTCGACGCTGGCCGTCACCCAC
TGCGAGGCGAGCTACTTCGGCAAGTACACGGGGTGGTGGTCGTTCGACTGCATCCAGGCGCTGGAGCAGGCGCCGGTGGA
ACGGTCCGAGCGGGACGTCTACTACCGGAAGGCCGCATACAGGTTCATCGGTGACAACACCGGAGAGCTGCCCCGTGTCG
CCGCCGCCCGGGCCGGCCGGACGTGGGGCCTCTACCGGCCGTGGCAGCAGACCGAGTTCGACGGCGTGGAGCTGCGCCCG
CTGGGGCTGAGCCGGCTCGGCATGGTCTGCCTCTGGGTGCTCGAGCTGGCCGCCGTCGCCGGCACGATGGTGCTGCGCCG
ACGGGGGGTCGTCCTGCTGCCGCTGCTGGCGGTACCGATCACACTCACGCTGGCCTCGGTGCTGGTCTACGGCACGACCC
GGTTCCGGGCGTGCGCCGAGCCGGCGGTAGTCCTGCTCGCGGCGGTCGGGATCGCGGCCATCGTCGGTGCGCTGCGCCGT
CGCCGGGCGGGCCTGGCCACCGCCGAGGCCCAGCGCGGGCGCGTAAAGTGA

Upstream 100 bases:

>100_bases
CGGTGATCCCGACGGTCTCCCAGTTCCGCGCGATTCATCTGGTATGTCCAGATCGTCGGGTTCCGTCGTCGAGGCTACGA
CGGATCGATCAGACGGTGTC

Downstream 100 bases:

>100_bases
CGACACGGCTGCCTTCCGGCACCGTTTTCGGGGGTCGCGCCCGGCTCGCTAGGGTGGCGCGGGCCGCCGAGCCGTCGGGT
ACCGCCTGGTACCTTGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MDVLSDEGQLAPAPRPPGAHRPAAAGRWSRSGGRPGRGRLAGSGQLPTQGPSDPGARSAVPPRLAPAGRAWWIGLLVVVA
VGLGVRLGYLFGWMHPAVVDGDPFYYHQAANLFADGHGWPDPYELRYFDRYVPDAQHPPLTSALLAIPSVLGFTGFLSHQ
IFSCLLGAVSVGVVGLVGRRAAGPATGLLAAGIAALYPGMWLNDALVMSETTGILTCALLIAAAHRFWDRRTVADACWLG
AALAAAMLARAELALLALVLVVPLIAMSRPLPWRRRLGLLAAAAGTSVAVVAPWTAYNLSRFEEPEFLSTGLGSTLAVTH
CEASYFGKYTGWWSFDCIQALEQAPVERSERDVYYRKAAYRFIGDNTGELPRVAAARAGRTWGLYRPWQQTEFDGVELRP
LGLSRLGMVCLWVLELAAVAGTMVLRRRGVVLLPLLAVPITLTLASVLVYGTTRFRACAEPAVVLLAAVGIAAIVGALRR
RRAGLATAEAQRGRVK

Sequences:

>Translated_496_residues
MDVLSDEGQLAPAPRPPGAHRPAAAGRWSRSGGRPGRGRLAGSGQLPTQGPSDPGARSAVPPRLAPAGRAWWIGLLVVVA
VGLGVRLGYLFGWMHPAVVDGDPFYYHQAANLFADGHGWPDPYELRYFDRYVPDAQHPPLTSALLAIPSVLGFTGFLSHQ
IFSCLLGAVSVGVVGLVGRRAAGPATGLLAAGIAALYPGMWLNDALVMSETTGILTCALLIAAAHRFWDRRTVADACWLG
AALAAAMLARAELALLALVLVVPLIAMSRPLPWRRRLGLLAAAAGTSVAVVAPWTAYNLSRFEEPEFLSTGLGSTLAVTH
CEASYFGKYTGWWSFDCIQALEQAPVERSERDVYYRKAAYRFIGDNTGELPRVAAARAGRTWGLYRPWQQTEFDGVELRP
LGLSRLGMVCLWVLELAAVAGTMVLRRRGVVLLPLLAVPITLTLASVLVYGTTRFRACAEPAVVLLAAVGIAAIVGALRR
RRAGLATAEAQRGRVK
>Mature_496_residues
MDVLSDEGQLAPAPRPPGAHRPAAAGRWSRSGGRPGRGRLAGSGQLPTQGPSDPGARSAVPPRLAPAGRAWWIGLLVVVA
VGLGVRLGYLFGWMHPAVVDGDPFYYHQAANLFADGHGWPDPYELRYFDRYVPDAQHPPLTSALLAIPSVLGFTGFLSHQ
IFSCLLGAVSVGVVGLVGRRAAGPATGLLAAGIAALYPGMWLNDALVMSETTGILTCALLIAAAHRFWDRRTVADACWLG
AALAAAMLARAELALLALVLVVPLIAMSRPLPWRRRLGLLAAAAGTSVAVVAPWTAYNLSRFEEPEFLSTGLGSTLAVTH
CEASYFGKYTGWWSFDCIQALEQAPVERSERDVYYRKAAYRFIGDNTGELPRVAAARAGRTWGLYRPWQQTEFDGVELRP
LGLSRLGMVCLWVLELAAVAGTMVLRRRGVVLLPLLAVPITLTLASVLVYGTTRFRACAEPAVVLLAAVGIAAIVGALRR
RRAGLATAEAQRGRVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52978; Mature: 52978

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLSDEGQLAPAPRPPGAHRPAAAGRWSRSGGRPGRGRLAGSGQLPTQGPSDPGARSAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPRLAPAGRAWWIGLLVVVAVGLGVRLGYLFGWMHPAVVDGDPFYYHQAANLFADGHGWP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCCC
DPYELRYFDRYVPDAQHPPLTSALLAIPSVLGFTGFLSHQIFSCLLGAVSVGVVGLVGRR
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AAGPATGLLAAGIAALYPGMWLNDALVMSETTGILTCALLIAAAHRFWDRRTVADACWLG
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALAAAMLARAELALLALVLVVPLIAMSRPLPWRRRLGLLAAAAGTSVAVVAPWTAYNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHH
RFEEPEFLSTGLGSTLAVTHCEASYFGKYTGWWSFDCIQALEQAPVERSERDVYYRKAAY
HCCCCHHHHHCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
RFIGDNTGELPRVAAARAGRTWGLYRPWQQTEFDGVELRPLGLSRLGMVCLWVLELAAVA
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
GTMVLRRRGVVLLPLLAVPITLTLASVLVYGTTRFRACAEPAVVLLAAVGIAAIVGALRR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAGLATAEAQRGRVK
HHCCCCHHHHHCCCCC
>Mature Secondary Structure
MDVLSDEGQLAPAPRPPGAHRPAAAGRWSRSGGRPGRGRLAGSGQLPTQGPSDPGARSAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPRLAPAGRAWWIGLLVVVAVGLGVRLGYLFGWMHPAVVDGDPFYYHQAANLFADGHGWP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCCC
DPYELRYFDRYVPDAQHPPLTSALLAIPSVLGFTGFLSHQIFSCLLGAVSVGVVGLVGRR
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AAGPATGLLAAGIAALYPGMWLNDALVMSETTGILTCALLIAAAHRFWDRRTVADACWLG
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALAAAMLARAELALLALVLVVPLIAMSRPLPWRRRLGLLAAAAGTSVAVVAPWTAYNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHH
RFEEPEFLSTGLGSTLAVTHCEASYFGKYTGWWSFDCIQALEQAPVERSERDVYYRKAAY
HCCCCHHHHHCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
RFIGDNTGELPRVAAARAGRTWGLYRPWQQTEFDGVELRPLGLSRLGMVCLWVLELAAVA
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
GTMVLRRRGVVLLPLLAVPITLTLASVLVYGTTRFRACAEPAVVLLAAVGIAAIVGALRR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAGLATAEAQRGRVK
HHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA